Factsheet for Bra003181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67598	Canola	plastid	92.47	92.71
AT3G54380.1	Thale cress	mitochondrion	75.58	71.67
VIT_13s0067g01060.t01	Wine grape	cytosol	43.38	59.43
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	51.17	57.77
VIT_13s0067g02460.t01	Wine grape	cytosol	31.95	53.02
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	54.81	51.84
KRH20594	Soybean	plastid	53.51	50.86
VIT_13s0067g01430.t01	Wine grape	plastid	54.55	49.53
VIT_13s0067g01260.t01	Wine grape	plastid	54.55	48.05
Solyc06g061120.2.1	Tomato	plastid	51.69	47.72
PGSC0003DMT400005365	Potato	plastid	51.43	47.48
GSMUA_Achr8P09880_001	Banana	nucleus	47.79	45.21
Zm00001d047474_P003	Maize	mitochondrion	44.68	43.22
KXG39369	Sorghum	nucleus	43.64	42.64
TraesCS1B01G271000.1	Wheat	cytosol	42.86	42.31
TraesCS1D01G260400.1	Wheat	cytosol	42.6	42.05
KRH13256	Soybean	plastid	35.84	37.3
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	41.04	37.0
VIT_18s0041g00180.t01	Wine grape	mitochondrion	14.03	35.76
Os03t0352200-01	Rice	plasma membrane	13.25	28.98
Bra020761.1-P	Field mustard	cytosol	31.69	7.41
Bra001190.1-P	Field mustard	plastid	31.17	7.32

Protein Annotations

EnsemblPlants:Bra003181.1	EnsemblPlants:Bra003181.1-P	EnsemblPlantsGene:Bra003181	Gene3D:1.25.40.990	InterPro:IPR000717	InterPro:PCI_dom
InterPro:SAC3/GANP/THP3	PANTHER:PTHR12436	PANTHER:PTHR12436:SF3	PFAM:PF03399	PFscan:PS50250	SEG:seg
UniParc:UPI0002541432	UniProt:M4CG48	MapMan:16.11.2.1	:	:	:

Description

AT3G54380 (E=1e-155) | SAC3/GANP family protein

Coordinates

chrA07:-:11720215..11722250

Molecular Weight (calculated)

44068.5 Da

IEP (calculated)

8.339

GRAVY (calculated)

-0.449

Length

385 amino acids

Sequence
(BLAST)

001: MNRRSRGSSS SSSSGSVGGA SDSYRRRSDV PRNRSNDNTK GGDSADVSFI VGTCSSMCPE RERVTRERLR DLSVFERLHG NPTKSSSDLA VKKFCRTLSA
101: ADVQASDVRP LSVLEETLSY LLSLLDSREH PFEVVHDFIF DRTRSIRQDL SIQNLASEGV IHLYEEIVKF HVISRQRLQG CSGTSISSMH HLNMEQLAKT
201: LTTLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNTSSGVM GEPLSLWFRK LTSNLIKSKE MCFVRKLLRS YRNGNYRSFL RTTASEATYL QYCISEPHIR
301: EMRSFAVECI NNVCYKLQPY PLLRLSHNLM MKEMDVESLC HECGLEIRTD SDGSIVLPTK QTNFCRPKEG FRNYDLIGIE VERLL

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.