Factsheet for HORVU4Hr1G048800.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G271000.1	Wheat	cytosol	77.28	84.62
TraesCS1D01G260400.1	Wheat	cytosol	77.05	84.36
Zm00001d047474_P003	Maize	mitochondrion	63.7	68.34
KXG39369	Sorghum	nucleus	62.3	67.51
GSMUA_Achr8P09880_001	Banana	nucleus	47.31	49.63
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	39.34	49.27
VIT_13s0067g01060.t01	Wine grape	cytosol	32.08	48.75
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	42.39	44.47
VIT_13s0067g02460.t01	Wine grape	cytosol	23.89	43.97
VIT_13s0067g01430.t01	Wine grape	plastid	42.39	42.69
CDY07542	Canola	plastid	37.94	41.86
Os03t0352200-01	Rice	plasma membrane	17.1	41.48
KRH20594	Soybean	plastid	39.11	41.23
VIT_13s0067g01260.t01	Wine grape	plastid	42.15	41.19
Bra003181.1-P	Field mustard	mitochondrion, plastid	37.0	41.04
CDX67598	Canola	plastid	36.77	40.89
AT3G54380.1	Thale cress	mitochondrion	37.7	39.66
PGSC0003DMT400005365	Potato	plastid	38.17	39.09
Solyc06g061120.2.1	Tomato	plastid	36.77	37.65
KRH13256	Soybean	plastid	27.17	31.35
VIT_18s0041g00180.t01	Wine grape	mitochondrion	10.54	29.8
HORVU2Hr1G025040.2	Barley	plastid	27.87	11.13

Protein Annotations

EnsemblPlants:HORVU4Hr1G048800.3	EnsemblPlantsGene:HORVU4Hr1G048800	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3	PANTHER:PTHR12436	PANTHER:PTHR12436:SF3
PFAM:PF03399	SEG:seg	UniParc:UPI000B4720FA	UniProt:A0A287NYP9	MapMan:16.11.2.1	:

Description

No Description!

Coordinates

chrchr4H:+:394999079..395040130

Molecular Weight (calculated)

48211.2 Da

IEP (calculated)

8.305

GRAVY (calculated)

-0.199

Length

427 amino acids

Sequence
(BLAST)

001: VGLTLRLLCL SIGDKITELS LRSRPPGEAT CELSMDRRDG AGNRGRSYAR GNGRGRVCQG RCEGRGCPST QPSPSTASAA SAAAVIPSAA PPIVGTCPNM
101: CPATERAQRE RLRDLAMFER ASSDPMRTSH SLAVKKFCRT ISSTSIQASD IRPLPVLRET MDYLLHLLNS SEYPFEIVHD FIFDRTRSVR QDLSIQNLVN
201: DQAIHIYEDV IKFHILSHQR LARSCQDSDA SSLCYLNTEQ MMKCLLSLFD MYHTIHKINS QSNKESEYYS FFVLLHLGCK IPKMANSLSF WYSQLPASIV
301: RSKEMIFART ILRCYHLGNF KRFFCMIAAE ATELQLCLLE PFLNEVRARA LMYFNHSGYK LQHHPLTHLS DILMIEELEL EDLCRVCGLE ISRSGDTKAF
401: APKQTTFSLP TLLSKSSGIY ISREIER

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.