Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G144800.1 | Wheat | plastid | 92.42 | 59.84 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 93.26 | 55.7 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 91.86 | 55.48 |
| OQU90370 | Sorghum | plastid | 60.15 | 36.35 |
| Zm00001d022343_P001 | Maize | plastid | 57.62 | 33.98 |
| CDY08059 | Canola | cytosol, plastid | 28.34 | 31.46 |
| HORVU4Hr1G048800.3 | Barley | cytosol, peroxisome | 11.13 | 27.87 |
| Zm00001d022344_P001 | Maize | cytosol | 30.12 | 26.48 |
| CDY05249 | Canola | nucleus | 28.72 | 26.44 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 30.22 | 25.88 |
| CDY24705 | Canola | cytosol, plastid | 29.28 | 25.76 |
| CDY70818 | Canola | mitochondrion | 8.42 | 23.62 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 32.83 | 23.17 |
| KRH20952 | Soybean | nucleus | 31.99 | 22.66 |
| KRH11322 | Soybean | nucleus | 32.83 | 22.56 |
| Solyc12g035670.1.1 | Tomato | nucleus | 32.27 | 22.04 |
| Bra001190.1-P | Field mustard | plastid | 31.06 | 20.24 |
| Bra020761.1-P | Field mustard | cytosol | 31.15 | 20.22 |
| CDX74111 | Canola | plastid | 31.06 | 20.15 |
| AT3G06290.1 | Thale cress | plastid | 31.71 | 19.98 |
| Zm00001d022346_P001 | Maize | cytosol | 45.74 | 17.84 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G025040.2 | EnsemblPlantsGene:HORVU2Hr1G025040 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | UniParc:UPI000B466DC8 |
| UniProt:A0A287HEI2 | MapMan:16.11.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:76955410..76968988
Molecular Weight (calculated)
118622.0 Da
IEP (calculated)
7.608
GRAVY (calculated)
-0.669
Length
1069 amino acids
Sequence
(BLAST)
(BLAST)
0001: RVAASSIGRP MHPGISSRSR SPPNLSNQRV DVPPENDNGM GQRRLVNYAD PLFENGSVQS SVQMRMQPPE TGKTARSPPL DISRQFRPSS SLPKSPPMQR
0101: AEPHDHVEMP NLSPSKFGIQ NQSPFPDAHA SFSPLLNSNL VRGSGRLRPA SGTSTSSSVL GDAAQQEMND HMREQRFSAP LQSRMDHSIS KRSRSPTLSY
0201: QDVDGAEARH GTGANARRLI NYADTLVDDV SIETSKRMRA PSSEFTNMPR SPPSDIRDNI RPAPAGFGSS NVAAQNLRSQ ADIQRSKASL PMVGSQTKSR
0301: IGDARSPPYQ QFRPSDTYSE EYSTPTFSPP KPSIPNSRSV TPPLDDGDDV IPSTELEREK QAKAKRLARF NVELSRPVEN INDLAKADKQ KQASSMGKVP
0401: ARSNDTTMAD MDPPELAAIL GLCSYMCPEP ERAERERKGD LDRYERLDGD RNQTTELLAV KKYTRTAERD ADLIRPLPVL QKTMSYLLSL LDHTYDDSFL
0501: GLYNFLWDRM RAIRMDLRMQ HFYNQEAISM LEQMIRLHIV AMHELCEYSK GEGFSEGFDA HLNIEQMNKT SVELFQMYED HRRNGVLFST EQEFRGYYAL
0601: LKLDKHPGYK VEPSELSLDL AKMSRKIRGS PDVLFAREVA RACRMGNYIA FFRLARKATY LQACLMHAHF AKVRRQALAS LHSGLQIGQG IPISHVVEWL
0701: AMEDEDIESL LEYHGFGSRQ YEGPYLVKEG PFLNSENDFP SGCSELVHSK KSQRIVDDVS FGPVSAPTGQ KATVAPYSGR FPSPASKREL IPPRSALVIP
0801: VSAKKEFGPS SSGPVSPTSS RQITSPYSGP FSPKAGNKQF NSTYSSPISP TGSRKGSVPV IPSTSPRATK HTLSHTGWMD DQRVASPKAK GKTTITDDFI
0901: ISEDQNADCV DFSREQTEIP QSESYTPHVD ALVATIVSHP LADGVSSDYA HIQEDELRAH GSGSDTDLAD ESPSCHQVNL IEHVWPTGSL LPDYEYGDHQ
1001: INNETTDDSL PIVVSPKKTI SDERLKMILR KWRQRAADQR SLREQKNALA IAALNSLSLG PPXXTKLQW
0101: AEPHDHVEMP NLSPSKFGIQ NQSPFPDAHA SFSPLLNSNL VRGSGRLRPA SGTSTSSSVL GDAAQQEMND HMREQRFSAP LQSRMDHSIS KRSRSPTLSY
0201: QDVDGAEARH GTGANARRLI NYADTLVDDV SIETSKRMRA PSSEFTNMPR SPPSDIRDNI RPAPAGFGSS NVAAQNLRSQ ADIQRSKASL PMVGSQTKSR
0301: IGDARSPPYQ QFRPSDTYSE EYSTPTFSPP KPSIPNSRSV TPPLDDGDDV IPSTELEREK QAKAKRLARF NVELSRPVEN INDLAKADKQ KQASSMGKVP
0401: ARSNDTTMAD MDPPELAAIL GLCSYMCPEP ERAERERKGD LDRYERLDGD RNQTTELLAV KKYTRTAERD ADLIRPLPVL QKTMSYLLSL LDHTYDDSFL
0501: GLYNFLWDRM RAIRMDLRMQ HFYNQEAISM LEQMIRLHIV AMHELCEYSK GEGFSEGFDA HLNIEQMNKT SVELFQMYED HRRNGVLFST EQEFRGYYAL
0601: LKLDKHPGYK VEPSELSLDL AKMSRKIRGS PDVLFAREVA RACRMGNYIA FFRLARKATY LQACLMHAHF AKVRRQALAS LHSGLQIGQG IPISHVVEWL
0701: AMEDEDIESL LEYHGFGSRQ YEGPYLVKEG PFLNSENDFP SGCSELVHSK KSQRIVDDVS FGPVSAPTGQ KATVAPYSGR FPSPASKREL IPPRSALVIP
0801: VSAKKEFGPS SSGPVSPTSS RQITSPYSGP FSPKAGNKQF NSTYSSPISP TGSRKGSVPV IPSTSPRATK HTLSHTGWMD DQRVASPKAK GKTTITDDFI
0901: ISEDQNADCV DFSREQTEIP QSESYTPHVD ALVATIVSHP LADGVSSDYA HIQEDELRAH GSGSDTDLAD ESPSCHQVNL IEHVWPTGSL LPDYEYGDHQ
1001: INNETTDDSL PIVVSPKKTI SDERLKMILR KWRQRAADQR SLREQKNALA IAALNSLSLG PPXXTKLQW
0001: MGTDAVEIGR SQDSKRKSRS DILPDQNMGF SRRNQSPVSG FENGNLVDGF QPLSSRTWMR SPSSAENNPV RSRSNPNQLI HQEQTGNSSF PYAHEVAEIQ
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.