Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05249 | Canola | nucleus | 82.55 | 86.39 |
| Bra020761.1-P | Field mustard | cytosol | 80.33 | 59.26 |
| CDY08059 | Canola | cytosol, plastid | 45.68 | 57.63 |
| CDY70818 | Canola | mitochondrion | 17.12 | 54.59 |
| AT3G06290.1 | Thale cress | plastid | 65.84 | 47.14 |
| CDX74111 | Canola | plastid | 61.89 | 45.63 |
| CDX67598 | Canola | plastid | 9.71 | 30.73 |
| CDY07542 | Canola | plastid | 9.63 | 30.23 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 30.95 | 30.13 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 36.71 | 29.44 |
| HORVU2Hr1G025040.2 | Barley | plastid | 25.76 | 29.28 |
| KRH20952 | Soybean | nucleus | 35.23 | 28.36 |
| KRH11322 | Soybean | nucleus | 35.56 | 27.76 |
| Solyc12g035670.1.1 | Tomato | nucleus | 35.23 | 27.35 |
| TraesCS2D01G144800.1 | Wheat | plastid | 29.88 | 21.99 |
| Zm00001d022343_P001 | Maize | plastid | 31.6 | 21.18 |
| OQU90370 | Sorghum | plastid | 29.96 | 20.58 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 30.12 | 20.45 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 29.71 | 20.4 |
| Zm00001d022344_P001 | Maize | cytosol | 14.4 | 14.39 |
| CDY24706 | Canola | cytosol | 3.37 | 13.14 |
| Zm00001d022346_P001 | Maize | cytosol | 25.1 | 11.13 |
Protein Annotations
| EnsemblPlants:CDY24705 | EnsemblPlantsGene:GSBRNA2T00027091001 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | ProteinID:CDY24705 | ProteinID:CDY24705.1 |
| SEG:seg | UniParc:UPI0004EF0901 | UniProt:A0A078GDU2 | MapMan:16.11.2.1 | : | : |
Description
BnaA05g31040DBnaA05g31040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDU2]
Coordinates
chrLK032162:+:551499..558240
Molecular Weight (calculated)
135821.0 Da
IEP (calculated)
7.671
GRAVY (calculated)
-0.673
Length
1215 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFKPFGKDV GPAMSSKPSP FTTFGASDPT QSTRCYVSFL AVFLRRSCWC CFDSPIQPAT SQHHSGYAGR SFGPGGIQSG PPIQRAPSPS ASQNPSPFVG
0101: QPYRPGGVQS SPTMNRTSPP VAFQNPSHSS GQSYRPGGTQ RSPGPVNVHW GPEAFPRPST SVRPYKFPGV QRSYNSSRKT EQGLAECYRP TLNPQFGHDE
0201: SRNFQNDHSE RSLATSSAST SHTLSRSVTD VVEIGRSQDS KRKSRSDVLP DRSLGVSRRN HSPGSGFGNG RLVDDFQQSS SQTWIRSPSS ADNNPVRSRI
0301: NPNRLIHQEQ SPSSSFPYAH EAAETQEATK RKSSVTPSDS PLHNNPVFSQ DDTRRSSTSP PGTKSFMLSR SSDSQFTGQS SVNNFSNAVK TSSSPATKRT
0401: RSPPFYPVED DIQGNSFLSQ SFTEGEEQAR AKRLARFKGE LDPVPTRPEA NRDVHKGDAL SDFESSEQPS LIVGLCPDMC PESERGERER KGDLDHYERV
0501: DGDRNQTSKS LAVKKYTRTA EREAILIRPM PILQNTMEYL LSLLDRPYNE NFLGMYNFLW DRMRAIRMDL RMQHIFNREA ITLLEQMIRL HIIAMHELCE
0601: YTKGEGFSEG FDAHLNIEQM NKTSVELFQM YDDHRKRGIT IPTEKEFRGY YALLKLDKHP GYKVEPSELS LDLANMTPEI RQTSEVLFAR SVARACRTGN
0701: FIAFFRLARK ASYLQACIMH AHFSKLRTQA LASLHAGLQN NQGLPVSDTS KWIGMEEEDI EALLEYHGFS IKEFEEPYMN HSNKGYQQET PPPQSLKKQT
0801: SLRLVDKEMA DSKTSLLLEE DKPVKTSVIN PVRPSDVKPA VDQQKGNHFT PAGEFHSPPK FYSPGFPQAE SLNLKKQPND GHTSISPAEI NFPFAEHMQT
0901: NLVPVPTLQQ KSPRSVENIF ALEESVPEAA MTVTLEEGFH DIEQEDEDGH EDITSQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLTL
1001: GTPIRLSKTD QSRACGEFDI DQAMKRRFEE REKSWSKLNI SDVIADILVE RNPDSKCIWW KVILCTQIKS VDSSSQDTHA AASRWLSSKL IPDTEHTISD
1101: ANLLFAAPGV SVWNKWVASG SDSDSRCCLS VARDVESDND PRGASAVLFL ASKGIPLNLQ REHLNRILES VPNGSLLPLL VLTSSSNGES QASPSFLSLI
1201: TPRRDMKFVF SAIHG
0101: QPYRPGGVQS SPTMNRTSPP VAFQNPSHSS GQSYRPGGTQ RSPGPVNVHW GPEAFPRPST SVRPYKFPGV QRSYNSSRKT EQGLAECYRP TLNPQFGHDE
0201: SRNFQNDHSE RSLATSSAST SHTLSRSVTD VVEIGRSQDS KRKSRSDVLP DRSLGVSRRN HSPGSGFGNG RLVDDFQQSS SQTWIRSPSS ADNNPVRSRI
0301: NPNRLIHQEQ SPSSSFPYAH EAAETQEATK RKSSVTPSDS PLHNNPVFSQ DDTRRSSTSP PGTKSFMLSR SSDSQFTGQS SVNNFSNAVK TSSSPATKRT
0401: RSPPFYPVED DIQGNSFLSQ SFTEGEEQAR AKRLARFKGE LDPVPTRPEA NRDVHKGDAL SDFESSEQPS LIVGLCPDMC PESERGERER KGDLDHYERV
0501: DGDRNQTSKS LAVKKYTRTA EREAILIRPM PILQNTMEYL LSLLDRPYNE NFLGMYNFLW DRMRAIRMDL RMQHIFNREA ITLLEQMIRL HIIAMHELCE
0601: YTKGEGFSEG FDAHLNIEQM NKTSVELFQM YDDHRKRGIT IPTEKEFRGY YALLKLDKHP GYKVEPSELS LDLANMTPEI RQTSEVLFAR SVARACRTGN
0701: FIAFFRLARK ASYLQACIMH AHFSKLRTQA LASLHAGLQN NQGLPVSDTS KWIGMEEEDI EALLEYHGFS IKEFEEPYMN HSNKGYQQET PPPQSLKKQT
0801: SLRLVDKEMA DSKTSLLLEE DKPVKTSVIN PVRPSDVKPA VDQQKGNHFT PAGEFHSPPK FYSPGFPQAE SLNLKKQPND GHTSISPAEI NFPFAEHMQT
0901: NLVPVPTLQQ KSPRSVENIF ALEESVPEAA MTVTLEEGFH DIEQEDEDGH EDITSQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLTL
1001: GTPIRLSKTD QSRACGEFDI DQAMKRRFEE REKSWSKLNI SDVIADILVE RNPDSKCIWW KVILCTQIKS VDSSSQDTHA AASRWLSSKL IPDTEHTISD
1101: ANLLFAAPGV SVWNKWVASG SDSDSRCCLS VARDVESDND PRGASAVLFL ASKGIPLNLQ REHLNRILES VPNGSLLPLL VLTSSSNGES QASPSFLSLI
1201: TPRRDMKFVF SAIHG
0001: MAFRPFGKDL GPMSSKPAPF TPFGASSTTR LYLSFLFLHT ANVGFACSDS SIQPPASQNH SAFAGQSFGP GGIRSGPSIQ RAPPLSASQN PQLSIGKPYR
0101: PGGVQSVPPI NRIPSPSAFQ NPSPSSGQPY QPGGIQRIPE PFNGIAWGPE ASRTSPSVRP YQFPGVQRPN LNPQYGHDGS RNFLKDHGEH SRATSPPATS
0201: HILSRMGTDA VEIGRSQDSK RKSRSDILPD QNMGFSRRNQ SPVSGFENGN LVDGFQPLSS RTWMRSPSSA ENNPVRSRSN PNQLIHQEQT GNSSFPYAHE
0301: VAEIQEATRR KSSAVAPSDK PLGDDPILSQ HDSQRFSTSP PTSGTKSYTL SRSSDSQFPG QPSSVNSFNN ARKTNSSPAT KRTRSPPVYP IEEDIPRNSF
0401: PSQDCTEGEE QARAKRLARF KGELEPIADR PVDIQLTKSP VNKTMKPLDN KQTFNSLESS RDALKGDALP DYENSEQPSL IIGVCPDMCP ESERGERERK
0501: GDLDHYERVD GDRNQTSKSL AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNQEAI TLLEQMIRLH
0601: IIAMHELCEY TKGEGFSEGF DAHLNIEQMN KTSVELFQMY DDHRKKGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN
0701: VARACRTGNF IAFFRLARKA SYLQACLMHA HFSKLRTQAL ASLHSGLQIN QGLPVSDMSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK NDLFLHADKD
0801: YKTKCSKLVH MKKSRTIVED VSAPTVVEDV STPFPLPSLI TEATIGNQQC ITAHKHEMPP ARSLKKQTSM RLFDKEVADS KTSLLAEEDK PMGTFVMNPP
0901: GPFVINPVVH QEKQNDLTSA GGFHSPVKLY SPFGSPKFPQ TKSSNLEKQP NDDRIGMSPG EIKFSIIGDV YTNHVPGPAL QQSPKSMPME IMPVTTIAEC
1001: PTSVENKYAL EESVPEAAMI CTLEKEFNDI DEEDEDEDGV ILNQYDEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLSLGT PIRFSKTDQS
1101: RACGEFNIDQ AMRRRFEERE KSWSRLNISD VIADILVGRN PESKCISWKV VLCTQTKSVN SSSSASQVTH SAASRWLSSK LMPHAEHSSL NDDNLLFSAP
1201: GVSVWNKWVA NGSDIDFTCC LSVARDVEAE NDMCETTCGA SAVLFLASGG LPLNLQREQL NLILESVPNG SVLPLLVVIS SCNGEHMEPD TDIVSGLGLH
1301: DIDKSKIASF SIVSIANKSQ KGQEVHFFND SRLRDGFKWL ASNSPLQPNL HHVKLRELFL THFSFSLELL KQMPDQEVGP NICISAFNDA LETSRRNITS
1401: AAEANPIGWP CPETMLLEDN RKECLMVKRY LPNLDWSSAE NVELLSSVLE NCKLPDFEDD LTWLTVGCAS GAEIENHTQR LEGCLIEYLT QRSNLMGVSL
1501: ATKETGVMLE RNTRLELHNS SRYHITPRWI GIFQRIFNWR IMGLFDASSS SAYVLKSDLN MSTSSYADKF LAEDASYPSC PPNLPLLHEM IEISCSPLKS
1601: PPPYDDKAQR VVETGMLIDD HRDIEESMLE KNREACRGID LMITEDDELG ERSWRSKGRE AAEKKTIEKR ESERLDELLE KCNMVQNSIA EKLCIYF
0101: PGGVQSVPPI NRIPSPSAFQ NPSPSSGQPY QPGGIQRIPE PFNGIAWGPE ASRTSPSVRP YQFPGVQRPN LNPQYGHDGS RNFLKDHGEH SRATSPPATS
0201: HILSRMGTDA VEIGRSQDSK RKSRSDILPD QNMGFSRRNQ SPVSGFENGN LVDGFQPLSS RTWMRSPSSA ENNPVRSRSN PNQLIHQEQT GNSSFPYAHE
0301: VAEIQEATRR KSSAVAPSDK PLGDDPILSQ HDSQRFSTSP PTSGTKSYTL SRSSDSQFPG QPSSVNSFNN ARKTNSSPAT KRTRSPPVYP IEEDIPRNSF
0401: PSQDCTEGEE QARAKRLARF KGELEPIADR PVDIQLTKSP VNKTMKPLDN KQTFNSLESS RDALKGDALP DYENSEQPSL IIGVCPDMCP ESERGERERK
0501: GDLDHYERVD GDRNQTSKSL AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNQEAI TLLEQMIRLH
0601: IIAMHELCEY TKGEGFSEGF DAHLNIEQMN KTSVELFQMY DDHRKKGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN
0701: VARACRTGNF IAFFRLARKA SYLQACLMHA HFSKLRTQAL ASLHSGLQIN QGLPVSDMSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK NDLFLHADKD
0801: YKTKCSKLVH MKKSRTIVED VSAPTVVEDV STPFPLPSLI TEATIGNQQC ITAHKHEMPP ARSLKKQTSM RLFDKEVADS KTSLLAEEDK PMGTFVMNPP
0901: GPFVINPVVH QEKQNDLTSA GGFHSPVKLY SPFGSPKFPQ TKSSNLEKQP NDDRIGMSPG EIKFSIIGDV YTNHVPGPAL QQSPKSMPME IMPVTTIAEC
1001: PTSVENKYAL EESVPEAAMI CTLEKEFNDI DEEDEDEDGV ILNQYDEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLSLGT PIRFSKTDQS
1101: RACGEFNIDQ AMRRRFEERE KSWSRLNISD VIADILVGRN PESKCISWKV VLCTQTKSVN SSSSASQVTH SAASRWLSSK LMPHAEHSSL NDDNLLFSAP
1201: GVSVWNKWVA NGSDIDFTCC LSVARDVEAE NDMCETTCGA SAVLFLASGG LPLNLQREQL NLILESVPNG SVLPLLVVIS SCNGEHMEPD TDIVSGLGLH
1301: DIDKSKIASF SIVSIANKSQ KGQEVHFFND SRLRDGFKWL ASNSPLQPNL HHVKLRELFL THFSFSLELL KQMPDQEVGP NICISAFNDA LETSRRNITS
1401: AAEANPIGWP CPETMLLEDN RKECLMVKRY LPNLDWSSAE NVELLSSVLE NCKLPDFEDD LTWLTVGCAS GAEIENHTQR LEGCLIEYLT QRSNLMGVSL
1501: ATKETGVMLE RNTRLELHNS SRYHITPRWI GIFQRIFNWR IMGLFDASSS SAYVLKSDLN MSTSSYADKF LAEDASYPSC PPNLPLLHEM IEISCSPLKS
1601: PPPYDDKAQR VVETGMLIDD HRDIEESMLE KNREACRGID LMITEDDELG ERSWRSKGRE AAEKKTIEKR ESERLDELLE KCNMVQNSIA EKLCIYF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.