Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24705 | Canola | cytosol, plastid | 57.63 | 45.68 |
| CDY05249 | Canola | nucleus | 53.58 | 44.44 |
| Bra001190.1-P | Field mustard | plastid | 64.28 | 37.74 |
| CDX74111 | Canola | plastid | 62.51 | 36.53 |
| AT3G06290.1 | Thale cress | plastid | 61.58 | 34.94 |
| CDY70818 | Canola | mitochondrion | 12.77 | 32.28 |
| CDX67598 | Canola | plastid | 12.25 | 30.73 |
| CDY07542 | Canola | plastid | 11.63 | 28.94 |
| HORVU2Hr1G025040.2 | Barley | plastid | 31.46 | 28.34 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 33.96 | 26.2 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 38.11 | 24.22 |
| KRH20952 | Soybean | nucleus | 36.66 | 23.39 |
| KRH11322 | Soybean | nucleus | 37.28 | 23.07 |
| Solyc12g035670.1.1 | Tomato | nucleus | 37.49 | 23.07 |
| CDY24706 | Canola | cytosol | 6.44 | 19.87 |
| TraesCS2D01G144800.1 | Wheat | plastid | 32.92 | 19.2 |
| Zm00001d022343_P001 | Maize | plastid | 34.89 | 18.53 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 33.54 | 18.04 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 33.13 | 18.02 |
| OQU90370 | Sorghum | plastid | 33.02 | 17.98 |
| Zm00001d022344_P001 | Maize | cytosol | 13.71 | 10.86 |
| Zm00001d022346_P001 | Maize | cytosol | 26.9 | 9.45 |
Protein Annotations
| EnsemblPlants:CDY08059 | EnsemblPlantsGene:GSBRNA2T00125315001 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| ncoils:Coil | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | ProteinID:CDY08059 |
| ProteinID:CDY08059.1 | SEG:seg | UniParc:UPI0004EE4033 | UniProt:A0A078F4X6 | MapMan:16.11.2.1 | : |
Description
BnaC03g34640DBnaC03g34640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4X6]
Coordinates
chrLK031982:+:931268..936761
Molecular Weight (calculated)
107763.0 Da
IEP (calculated)
6.993
GRAVY (calculated)
-0.673
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFKPFGKDV GPAMSSKPSP FTTFGASSAP TQTTSTSLCA YCDCNLFACS DSPIQPPASQ GYAGQSFGPR GTQRLDKTFA LQLRFVSQNS PPFIGQPYRP
101: GGVPSSPPMN RTPSPLAFQN PSPSSGQPYR PGGTQRSPGP VNGIKWGSEG FPRPSPSVRP YQFPGVQSRP TLNPQFGHDE SRNLLKDQGK HSLATSAASI
201: SHTLSRSGPD AVEIGRSQDS KRKSQSDLPG RSLGFPRINH SPVSDFENGS LVDDVQQPSS HTWIRSPSAD NNPVSSRSNP NRLIQQEQTP SSSFPYAHES
301: VEIQEATKRR YNSMITHHIL LSTSPPASGA VSFMLSRSSD SQFPVQPSSL NNFNSAGKAN SSPATKRTRS PTSYPVEEDI QGNSFPSRDC TEGEEQARAK
401: RLARFKGELD PVPARPVDTQ LTKSSVNKTV KPLDNKQTFN SLESSRDALS EYESSEQPSL IVGLCPDMCP ESERGERERK GDLDHYERVD GDRNQTSKFL
501: AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNREAI TLLEQMIRLH ILAMHELCEY TKGEGFSEGF
601: DAHLNIEQMN KTSVELFQMY DDHRKRGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN VARACRTGNF IAFFRLARKA
701: SYLQACLMHA HFSKLRTQAL ASLHSGLQNN QGIPVSDTSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK DGLFLHADTD YKTKCSKLVH MKKSRTIVED
801: VSAPSTDENV SAPSPLSSLP TEASSAYVLK SDLTMSASSY ADKFLSGEDA AYQSPRPNLP LLREMIQISC SPFKASRVQT ERAIDDHRDI DETMLEKSRE
901: ASRRIDMMIT EDDELADETE RSPRKEAAEK KTMKDRESER LDELLEKCNL VQNSIAEKLC IYF
101: GGVPSSPPMN RTPSPLAFQN PSPSSGQPYR PGGTQRSPGP VNGIKWGSEG FPRPSPSVRP YQFPGVQSRP TLNPQFGHDE SRNLLKDQGK HSLATSAASI
201: SHTLSRSGPD AVEIGRSQDS KRKSQSDLPG RSLGFPRINH SPVSDFENGS LVDDVQQPSS HTWIRSPSAD NNPVSSRSNP NRLIQQEQTP SSSFPYAHES
301: VEIQEATKRR YNSMITHHIL LSTSPPASGA VSFMLSRSSD SQFPVQPSSL NNFNSAGKAN SSPATKRTRS PTSYPVEEDI QGNSFPSRDC TEGEEQARAK
401: RLARFKGELD PVPARPVDTQ LTKSSVNKTV KPLDNKQTFN SLESSRDALS EYESSEQPSL IVGLCPDMCP ESERGERERK GDLDHYERVD GDRNQTSKFL
501: AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNREAI TLLEQMIRLH ILAMHELCEY TKGEGFSEGF
601: DAHLNIEQMN KTSVELFQMY DDHRKRGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN VARACRTGNF IAFFRLARKA
701: SYLQACLMHA HFSKLRTQAL ASLHSGLQNN QGIPVSDTSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK DGLFLHADTD YKTKCSKLVH MKKSRTIVED
801: VSAPSTDENV SAPSPLSSLP TEASSAYVLK SDLTMSASSY ADKFLSGEDA AYQSPRPNLP LLREMIQISC SPFKASRVQT ERAIDDHRDI DETMLEKSRE
901: ASRRIDMMIT EDDELADETE RSPRKEAAEK KTMKDRESER LDELLEKCNL VQNSIAEKLC IYF
0001: MAFRPFGKDL GPMSSKPAPF TPFGASSTTR LYLSFLFLHT ANVGFACSDS SIQPPASQNH SAFAGQSFGP GGIRSGPSIQ RAPPLSASQN PQLSIGKPYR
0101: PGGVQSVPPI NRIPSPSAFQ NPSPSSGQPY QPGGIQRIPE PFNGIAWGPE ASRTSPSVRP YQFPGVQRPN LNPQYGHDGS RNFLKDHGEH SRATSPPATS
0201: HILSRMGTDA VEIGRSQDSK RKSRSDILPD QNMGFSRRNQ SPVSGFENGN LVDGFQPLSS RTWMRSPSSA ENNPVRSRSN PNQLIHQEQT GNSSFPYAHE
0301: VAEIQEATRR KSSAVAPSDK PLGDDPILSQ HDSQRFSTSP PTSGTKSYTL SRSSDSQFPG QPSSVNSFNN ARKTNSSPAT KRTRSPPVYP IEEDIPRNSF
0401: PSQDCTEGEE QARAKRLARF KGELEPIADR PVDIQLTKSP VNKTMKPLDN KQTFNSLESS RDALKGDALP DYENSEQPSL IIGVCPDMCP ESERGERERK
0501: GDLDHYERVD GDRNQTSKSL AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNQEAI TLLEQMIRLH
0601: IIAMHELCEY TKGEGFSEGF DAHLNIEQMN KTSVELFQMY DDHRKKGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN
0701: VARACRTGNF IAFFRLARKA SYLQACLMHA HFSKLRTQAL ASLHSGLQIN QGLPVSDMSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK NDLFLHADKD
0801: YKTKCSKLVH MKKSRTIVED VSAPTVVEDV STPFPLPSLI TEATIGNQQC ITAHKHEMPP ARSLKKQTSM RLFDKEVADS KTSLLAEEDK PMGTFVMNPP
0901: GPFVINPVVH QEKQNDLTSA GGFHSPVKLY SPFGSPKFPQ TKSSNLEKQP NDDRIGMSPG EIKFSIIGDV YTNHVPGPAL QQSPKSMPME IMPVTTIAEC
1001: PTSVENKYAL EESVPEAAMI CTLEKEFNDI DEEDEDEDGV ILNQYDEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLSLGT PIRFSKTDQS
1101: RACGEFNIDQ AMRRRFEERE KSWSRLNISD VIADILVGRN PESKCISWKV VLCTQTKSVN SSSSASQVTH SAASRWLSSK LMPHAEHSSL NDDNLLFSAP
1201: GVSVWNKWVA NGSDIDFTCC LSVARDVEAE NDMCETTCGA SAVLFLASGG LPLNLQREQL NLILESVPNG SVLPLLVVIS SCNGEHMEPD TDIVSGLGLH
1301: DIDKSKIASF SIVSIANKSQ KGQEVHFFND SRLRDGFKWL ASNSPLQPNL HHVKLRELFL THFSFSLELL KQMPDQEVGP NICISAFNDA LETSRRNITS
1401: AAEANPIGWP CPETMLLEDN RKECLMVKRY LPNLDWSSAE NVELLSSVLE NCKLPDFEDD LTWLTVGCAS GAEIENHTQR LEGCLIEYLT QRSNLMGVSL
1501: ATKETGVMLE RNTRLELHNS SRYHITPRWI GIFQRIFNWR IMGLFDASSS SAYVLKSDLN MSTSSYADKF LAEDASYPSC PPNLPLLHEM IEISCSPLKS
1601: PPPYDDKAQR VVETGMLIDD HRDIEESMLE KNREACRGID LMITEDDELG ERSWRSKGRE AAEKKTIEKR ESERLDELLE KCNMVQNSIA EKLCIYF
0101: PGGVQSVPPI NRIPSPSAFQ NPSPSSGQPY QPGGIQRIPE PFNGIAWGPE ASRTSPSVRP YQFPGVQRPN LNPQYGHDGS RNFLKDHGEH SRATSPPATS
0201: HILSRMGTDA VEIGRSQDSK RKSRSDILPD QNMGFSRRNQ SPVSGFENGN LVDGFQPLSS RTWMRSPSSA ENNPVRSRSN PNQLIHQEQT GNSSFPYAHE
0301: VAEIQEATRR KSSAVAPSDK PLGDDPILSQ HDSQRFSTSP PTSGTKSYTL SRSSDSQFPG QPSSVNSFNN ARKTNSSPAT KRTRSPPVYP IEEDIPRNSF
0401: PSQDCTEGEE QARAKRLARF KGELEPIADR PVDIQLTKSP VNKTMKPLDN KQTFNSLESS RDALKGDALP DYENSEQPSL IIGVCPDMCP ESERGERERK
0501: GDLDHYERVD GDRNQTSKSL AVKKYTRTAE REAILIRPMP ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNQEAI TLLEQMIRLH
0601: IIAMHELCEY TKGEGFSEGF DAHLNIEQMN KTSVELFQMY DDHRKKGITV PTEKEFRGYY ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN
0701: VARACRTGNF IAFFRLARKA SYLQACLMHA HFSKLRTQAL ASLHSGLQIN QGLPVSDMSN WIGMEEEDIE ALLEYHGFSI KVFEEPYMVK NDLFLHADKD
0801: YKTKCSKLVH MKKSRTIVED VSAPTVVEDV STPFPLPSLI TEATIGNQQC ITAHKHEMPP ARSLKKQTSM RLFDKEVADS KTSLLAEEDK PMGTFVMNPP
0901: GPFVINPVVH QEKQNDLTSA GGFHSPVKLY SPFGSPKFPQ TKSSNLEKQP NDDRIGMSPG EIKFSIIGDV YTNHVPGPAL QQSPKSMPME IMPVTTIAEC
1001: PTSVENKYAL EESVPEAAMI CTLEKEFNDI DEEDEDEDGV ILNQYDEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLSLGT PIRFSKTDQS
1101: RACGEFNIDQ AMRRRFEERE KSWSRLNISD VIADILVGRN PESKCISWKV VLCTQTKSVN SSSSASQVTH SAASRWLSSK LMPHAEHSSL NDDNLLFSAP
1201: GVSVWNKWVA NGSDIDFTCC LSVARDVEAE NDMCETTCGA SAVLFLASGG LPLNLQREQL NLILESVPNG SVLPLLVVIS SCNGEHMEPD TDIVSGLGLH
1301: DIDKSKIASF SIVSIANKSQ KGQEVHFFND SRLRDGFKWL ASNSPLQPNL HHVKLRELFL THFSFSLELL KQMPDQEVGP NICISAFNDA LETSRRNITS
1401: AAEANPIGWP CPETMLLEDN RKECLMVKRY LPNLDWSSAE NVELLSSVLE NCKLPDFEDD LTWLTVGCAS GAEIENHTQR LEGCLIEYLT QRSNLMGVSL
1501: ATKETGVMLE RNTRLELHNS SRYHITPRWI GIFQRIFNWR IMGLFDASSS SAYVLKSDLN MSTSSYADKF LAEDASYPSC PPNLPLLHEM IEISCSPLKS
1601: PPPYDDKAQR VVETGMLIDD HRDIEESMLE KNREACRGID LMITEDDELG ERSWRSKGRE AAEKKTIEKR ESERLDELLE KCNMVQNSIA EKLCIYF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.