Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G025040.2 | Barley | plastid | 59.84 | 92.42 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 97.64 | 90.06 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 96.18 | 89.72 |
| OQU90370 | Sorghum | plastid | 62.14 | 58.0 |
| Zm00001d022344_P001 | Maize | cytosol | 42.28 | 57.4 |
| Zm00001d022343_P001 | Maize | plastid | 59.66 | 54.33 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 32.22 | 42.63 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 34.16 | 37.23 |
| KRH20952 | Soybean | nucleus | 32.65 | 35.72 |
| KRH11322 | Soybean | nucleus | 33.13 | 35.15 |
| Solyc12g035670.1.1 | Tomato | nucleus | 32.1 | 33.87 |
| CDY08059 | Canola | cytosol, plastid | 19.2 | 32.92 |
| Zm00001d022346_P001 | Maize | cytosol | 52.7 | 31.74 |
| Bra020761.1-P | Field mustard | cytosol | 31.01 | 31.09 |
| CDY05249 | Canola | nucleus | 21.8 | 31.01 |
| Bra001190.1-P | Field mustard | plastid | 30.59 | 30.79 |
| CDX74111 | Canola | plastid | 30.35 | 30.4 |
| AT3G06290.1 | Thale cress | plastid | 31.07 | 30.23 |
| CDY24705 | Canola | cytosol, plastid | 21.99 | 29.88 |
| TraesCS1D01G260400.1 | Wheat | cytosol | 6.48 | 27.44 |
| CDY70818 | Canola | mitochondrion | 5.39 | 23.36 |
Protein Annotations
| Gene3D:1.25.40.990 | MapMan:16.11.2.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0034399 | GO:GO:0040029 | GO:GO:0044030 | GO:GO:0060968 | GO:GO:0090065 | InterPro:IPR000717 |
| InterPro:PCI_dom | PFAM:PF03399 | PFscan:PS50250 | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | InterPro:SAC3/GANP/THP3 |
| EnsemblPlantsGene:TraesCS2D01G144800 | EnsemblPlants:TraesCS2D01G144800.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:86076420..86086693
Molecular Weight (calculated)
183547.0 Da
IEP (calculated)
6.127
GRAVY (calculated)
-0.483
Length
1651 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHPGISSRSR SPPNLSNQRV NVPPENDNGM GQRRLVNYAD PLFENESAQS SVQMRMQPPE TGKTARSPPL DMSRQFRPSS SLPKFPPTQR AEPHDYVQMP
0101: NLSPSKFGIQ NQSPFHDAHA TFSPLLNSNL VPGSERPRPA SGTSTSSSSV LGGAAQQEMN DHMREQRFSA PLQSRTMDHS ISKRSRSPTL SYEDVDGAEA
0201: RHGTGANARR LINYADTLVD DVSIETSKRM RAPSSEFTNM PKSPPSDIRD NIRPAPAGFG SSNVAAQNLR SQADIQRSEA SLLKVGSQIK SRIGDVRSPP
0301: YQQFRPSDTY SKEYSTPTFS PPKPSILNSR GVTPPLDDGD DFIPSTELER EKQAKAKRLA RFNVELSRPV ENINDLAKAD KQKQASSMGK VPVKSNDSTM
0401: ADMDPPELAA ILGLCSYMCP EPERAERERK GDLDRYERLG GDRNQTTELL AVKKYTRTAE RDAELIRPLP VLQKTMSYLL SLLDHTYDDS FLGLYNFLWD
0501: RMRAIRMDLR MQHFFNQEAI SMLEQMIRLH IVAMHELCEY SKGEGFSEGF DAHLNIEQMN KTSVELFQMY EDHRRNGVFF STEQEFRGYY ALLKLDKHPG
0601: YKVEPSELSL DLAKMSREIR GSPDVLFARE VARACRMGNY IAFFRLARKA TYLQACLMHA HFAKVRRQAL ASLHSGLQIG QGIPISHVVE WLAMEDEDIE
0701: SLLEHHGFGS KQYEGPYLVK EGPFLNSESD FPSGCSELVH SKKSQRIVDD VSSGPVCAPT GQKATVAPYS VGFPSPASKR EPVPPRSALV IPVSAKKEFG
0801: PSFSGPVSPT SSGQITSPYS GLFSPKAGNK QFNSTYSSPI SPTGSRKGSV PVILSTSPRA TKHALSHTGW MDDQRVASPK AKGKITMTDD FIISEDQNGD
0901: FVDFSREQME IPQSEAYTQH VDALVATIVS HPLADVVSSD YAHMHEEEDE LRAHGSGSDT DLDDESPSCH QVNLIERVGP TGSLLPGHED GDYQNNNETT
1001: YDSLPIVVSP KKTISDERLK MILRKWRQRA ADQRSLREQK NALAIAALNS LSLGPPVHQT AVVPKHAVHE LDIGHAFKER YTRQQRSWSR LNVSELAGPI
1101: LTERKPDARC ICWKMLVLVP PGAMKSQSNN VASRWLLKKL MGSGSEDNGL LLTSADLSIW RTWLSSPSVC CLSVVRASDQ QVIGNEIADS TNCIVFVVSE
1201: SIPWEMQKAR FSSLLASIPP QSCLPLLILS GDTYNEGYDY ASQNVIDKLG VSGLSEGKIA SSLVVFLAGS CTEGYINGFF DDDKLREGLK WMANSFPLQP
1301: DVILVKTHEL LLNYLNPSLE LLNKRVAPEV GPEHCISVFN NAVSQLGEEI LAAAYISPNQ WPTLEIDLLE RSSSERMFTE MFLPSIGWSS PSRIQPLVES
1401: VKSLQLPGFS DDLSWLKQGS YMGRQIQDQK LYLEECLTRY LTQSARLLNG AQAVAEAKIM VQKGVDLELR DSNHYLVPNW VTIFRRIYNW RLARLSTGDF
1501: SEAYVLSQRL YQPPAADSDG ATQHGLTANS DIIGEAPILE DHDMMPAVPS GLSLDEIIEV SCDLDSDSPP SLRPPPPPLP TPAYDEPQAL AHINGEVSPV
1601: HGATDDNMHD APRRVELRDL VPLKWDDELA KLEQQCAKLQ SKIDEKLFIY F
0101: NLSPSKFGIQ NQSPFHDAHA TFSPLLNSNL VPGSERPRPA SGTSTSSSSV LGGAAQQEMN DHMREQRFSA PLQSRTMDHS ISKRSRSPTL SYEDVDGAEA
0201: RHGTGANARR LINYADTLVD DVSIETSKRM RAPSSEFTNM PKSPPSDIRD NIRPAPAGFG SSNVAAQNLR SQADIQRSEA SLLKVGSQIK SRIGDVRSPP
0301: YQQFRPSDTY SKEYSTPTFS PPKPSILNSR GVTPPLDDGD DFIPSTELER EKQAKAKRLA RFNVELSRPV ENINDLAKAD KQKQASSMGK VPVKSNDSTM
0401: ADMDPPELAA ILGLCSYMCP EPERAERERK GDLDRYERLG GDRNQTTELL AVKKYTRTAE RDAELIRPLP VLQKTMSYLL SLLDHTYDDS FLGLYNFLWD
0501: RMRAIRMDLR MQHFFNQEAI SMLEQMIRLH IVAMHELCEY SKGEGFSEGF DAHLNIEQMN KTSVELFQMY EDHRRNGVFF STEQEFRGYY ALLKLDKHPG
0601: YKVEPSELSL DLAKMSREIR GSPDVLFARE VARACRMGNY IAFFRLARKA TYLQACLMHA HFAKVRRQAL ASLHSGLQIG QGIPISHVVE WLAMEDEDIE
0701: SLLEHHGFGS KQYEGPYLVK EGPFLNSESD FPSGCSELVH SKKSQRIVDD VSSGPVCAPT GQKATVAPYS VGFPSPASKR EPVPPRSALV IPVSAKKEFG
0801: PSFSGPVSPT SSGQITSPYS GLFSPKAGNK QFNSTYSSPI SPTGSRKGSV PVILSTSPRA TKHALSHTGW MDDQRVASPK AKGKITMTDD FIISEDQNGD
0901: FVDFSREQME IPQSEAYTQH VDALVATIVS HPLADVVSSD YAHMHEEEDE LRAHGSGSDT DLDDESPSCH QVNLIERVGP TGSLLPGHED GDYQNNNETT
1001: YDSLPIVVSP KKTISDERLK MILRKWRQRA ADQRSLREQK NALAIAALNS LSLGPPVHQT AVVPKHAVHE LDIGHAFKER YTRQQRSWSR LNVSELAGPI
1101: LTERKPDARC ICWKMLVLVP PGAMKSQSNN VASRWLLKKL MGSGSEDNGL LLTSADLSIW RTWLSSPSVC CLSVVRASDQ QVIGNEIADS TNCIVFVVSE
1201: SIPWEMQKAR FSSLLASIPP QSCLPLLILS GDTYNEGYDY ASQNVIDKLG VSGLSEGKIA SSLVVFLAGS CTEGYINGFF DDDKLREGLK WMANSFPLQP
1301: DVILVKTHEL LLNYLNPSLE LLNKRVAPEV GPEHCISVFN NAVSQLGEEI LAAAYISPNQ WPTLEIDLLE RSSSERMFTE MFLPSIGWSS PSRIQPLVES
1401: VKSLQLPGFS DDLSWLKQGS YMGRQIQDQK LYLEECLTRY LTQSARLLNG AQAVAEAKIM VQKGVDLELR DSNHYLVPNW VTIFRRIYNW RLARLSTGDF
1501: SEAYVLSQRL YQPPAADSDG ATQHGLTANS DIIGEAPILE DHDMMPAVPS GLSLDEIIEV SCDLDSDSPP SLRPPPPPLP TPAYDEPQAL AHINGEVSPV
1601: HGATDDNMHD APRRVELRDL VPLKWDDELA KLEQQCAKLQ SKIDEKLFIY F
0001: MAFRPFGKDL GPMSSKPAPF TPFGASSTTS DSSIQPPASQ NHSAFAGQSF GPGGIRSGPS IQRAPPLSAS QNPQLSIGKP YRPGGVQSVP PINRIPSPSA
0101: FQNPSPSSGQ PYQPGGIQRI PEPFNGIAWG PEASRTSPSV RPYQFPGVQR PNLNPQYGHD GSRNFLKDHG EHSRATSPPA TSHILSRMGT DAVEIGRSQD
0201: SKRKSRSDIL PDQNMGFSRR NQSPVSGFEN GNLVDGFQPL SSRTWMRSPS SAENNPVRSR SNPNQLIHQE QTGNSSFPYA HEVAEIQEAT RRKSSAVAPS
0301: DKPLGDDPIL SQHDSQRFST SPPTSGTKSY TLSRSSDSQF PGQPSSVNSF NNARKTNSSP ATKRTRSPPV YPIEEDIPRN SFPSQDCTEG EEQARAKRLA
0401: RFKGELEPIA DRPVDIQLTK SPVNKTMKPL DNKQTFNSLE SSRDALKGDA LPDYENSEQP SLIIGVCPDM CPESERGERE RKGDLDHYER VDGDRNQTSK
0501: SLAVKKYTRT AEREAILIRP MPILQNTMEY LLSLLDRPYN ENFLGMYNFL WDRMRAIRMD LRMQHIFNQE AITLLEQMIR LHIIAMHELC EYTKGEGFSE
0601: GFDAHLNIEQ MNKTSVELFQ MYDDHRKKGI TVPTEKEFRG YYALLKLDKH PGYKVEPSEL SLDLANMTPE IRQTSEVLFA RNVARACRTG NFIAFFRLAR
0701: KASYLQACLM HAHFSKLRTQ ALASLHSGLQ INQGLPVSDM SNWIGMEEED IEALLEYHGF SIKVFEEPYM VKNDLFLHAD KDYKTKCSKL VHMKKSRTIV
0801: EDVSAPTVVE DVSTPFPLPS LITEATIGNQ QCITAHKHEM PPARSLKKQT SMRLFDKEVA DSKTSLLAEE DKPMGTFVMN PPGPFVINPV VHQEKQNDLT
0901: SAGGFHSPVK LYSPFGSPKF PQTKSSNLEK QPNDDRIGMS PGEIKFSIIG DVYTNHVPGP ALQQSPKSMP MEIMPVTTIA ECPTSVENKY ALEESVPEAA
1001: MICTLEKEFN DIDEEDEDED GVILNQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLSL GTPIRFSKTD QSRACGEFNI DQAMRRRFEE
1101: REKSWSRLNI SDVIADILVG RNPESKCISW KVVLCTQTKS VNSSSSASQV THSAASRWLS SKLMPHAEHS SLNDDNLLFS APGVSVWNKW VANGSDIDFT
1201: CCLSVARDVE AENDMCETTC GASAVLFLAS GGLPLNLQRE QLNLILESVP NGSVLPLLVV ISSCNGEHME PDTDIVSGLG LHDIDKSKIA SFSIVSIANK
1301: SQKGQEVHFF NDSRLRDGFK WLASNSPLQP NLHHVKLREL FLTHFSFSLE LLKQMPDQEV GPNICISAFN DALETSRRNI TSAAEANPIG WPCPETMLLE
1401: DNRKECLMVK RYLPNLDWSS AENVELLSSV LENCKLPDFE DDLTWLTVGC ASGAEIENHT QRLEGCLIEY LTQRSNLMGV SLATKETGVM LERNTRLELH
1501: NSSRYHITPR WIGIFQRIFN WRIMGLFDAS SSSAYVLKSD LNMSTSSYAD KFLAEDASYP SCPPNLPLLH EMIEISCSPL KSPPPYDDKA QRVVETGMLI
1601: DDHRDIEESM LEKNREACRG IDLMITEDDE LGERSWRSKG REAAEKKTIE KRESERLDEL LEKCNMVQNS IAEKLCIYF
0101: FQNPSPSSGQ PYQPGGIQRI PEPFNGIAWG PEASRTSPSV RPYQFPGVQR PNLNPQYGHD GSRNFLKDHG EHSRATSPPA TSHILSRMGT DAVEIGRSQD
0201: SKRKSRSDIL PDQNMGFSRR NQSPVSGFEN GNLVDGFQPL SSRTWMRSPS SAENNPVRSR SNPNQLIHQE QTGNSSFPYA HEVAEIQEAT RRKSSAVAPS
0301: DKPLGDDPIL SQHDSQRFST SPPTSGTKSY TLSRSSDSQF PGQPSSVNSF NNARKTNSSP ATKRTRSPPV YPIEEDIPRN SFPSQDCTEG EEQARAKRLA
0401: RFKGELEPIA DRPVDIQLTK SPVNKTMKPL DNKQTFNSLE SSRDALKGDA LPDYENSEQP SLIIGVCPDM CPESERGERE RKGDLDHYER VDGDRNQTSK
0501: SLAVKKYTRT AEREAILIRP MPILQNTMEY LLSLLDRPYN ENFLGMYNFL WDRMRAIRMD LRMQHIFNQE AITLLEQMIR LHIIAMHELC EYTKGEGFSE
0601: GFDAHLNIEQ MNKTSVELFQ MYDDHRKKGI TVPTEKEFRG YYALLKLDKH PGYKVEPSEL SLDLANMTPE IRQTSEVLFA RNVARACRTG NFIAFFRLAR
0701: KASYLQACLM HAHFSKLRTQ ALASLHSGLQ INQGLPVSDM SNWIGMEEED IEALLEYHGF SIKVFEEPYM VKNDLFLHAD KDYKTKCSKL VHMKKSRTIV
0801: EDVSAPTVVE DVSTPFPLPS LITEATIGNQ QCITAHKHEM PPARSLKKQT SMRLFDKEVA DSKTSLLAEE DKPMGTFVMN PPGPFVINPV VHQEKQNDLT
0901: SAGGFHSPVK LYSPFGSPKF PQTKSSNLEK QPNDDRIGMS PGEIKFSIIG DVYTNHVPGP ALQQSPKSMP MEIMPVTTIA ECPTSVENKY ALEESVPEAA
1001: MICTLEKEFN DIDEEDEDED GVILNQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLSL GTPIRFSKTD QSRACGEFNI DQAMRRRFEE
1101: REKSWSRLNI SDVIADILVG RNPESKCISW KVVLCTQTKS VNSSSSASQV THSAASRWLS SKLMPHAEHS SLNDDNLLFS APGVSVWNKW VANGSDIDFT
1201: CCLSVARDVE AENDMCETTC GASAVLFLAS GGLPLNLQRE QLNLILESVP NGSVLPLLVV ISSCNGEHME PDTDIVSGLG LHDIDKSKIA SFSIVSIANK
1301: SQKGQEVHFF NDSRLRDGFK WLASNSPLQP NLHHVKLREL FLTHFSFSLE LLKQMPDQEV GPNICISAFN DALETSRRNI TSAAEANPIG WPCPETMLLE
1401: DNRKECLMVK RYLPNLDWSS AENVELLSSV LENCKLPDFE DDLTWLTVGC ASGAEIENHT QRLEGCLIEY LTQRSNLMGV SLATKETGVM LERNTRLELH
1501: NSSRYHITPR WIGIFQRIFN WRIMGLFDAS SSSAYVLKSD LNMSTSSYAD KFLAEDASYP SCPPNLPLLH EMIEISCSPL KSPPPYDDKA QRVVETGMLI
1601: DDHRDIEESM LEKNREACRG IDLMITEDDE LGERSWRSKG REAAEKKTIE KRESERLDEL LEKCNMVQNS IAEKLCIYF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.