Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G348300.1 | Wheat | cytosol | 93.58 | 94.76 |
| TraesCS3A01G354400.3 | Wheat | nucleus | 89.92 | 93.33 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 86.53 | 82.48 |
| Os01t0836400-02 | Rice | nucleus | 60.21 | 73.85 |
| OQU87820 | Sorghum | nucleus | 54.5 | 65.21 |
| TraesCS1B01G297000.5 | Wheat | nucleus | 52.81 | 61.09 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 25.69 | 57.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.44 | 50.47 |
| KRG92986 | Soybean | nucleus | 38.27 | 42.64 |
| KRH36229 | Soybean | nucleus | 38.27 | 42.48 |
| Solyc05g054910.2.1 | Tomato | nucleus | 35.5 | 41.42 |
| CDX74854 | Canola | nucleus | 35.68 | 40.28 |
| Bra017081.1-P | Field mustard | nucleus | 35.24 | 40.18 |
| Bra005052.1-P | Field mustard | nucleus | 35.59 | 40.18 |
| Bra005050.1-P | Field mustard | nucleus | 35.59 | 40.18 |
| CDX93271 | Canola | nucleus | 35.33 | 40.16 |
| CDY07001 | Canola | nucleus | 35.06 | 40.02 |
| CDY44640 | Canola | nucleus | 35.95 | 40.02 |
| AT2G39340.1 | Thale cress | nucleus | 35.77 | 39.86 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 10.35 | 29.15 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G387400.1 | EnsemblPlantsGene:TraesCS3B01G387400 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | MapMan:16.11.2.1 |
Description
No Description!
Coordinates
chr3B:+:609339484..609349655
Molecular Weight (calculated)
121168.0 Da
IEP (calculated)
7.555
GRAVY (calculated)
-0.732
Length
1121 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQGGEAAA GSDPKPNEGW SVEQPSSSQY QPSASGHHAW SSSSGASWNY PVDNSNQNAV YYDPQRDVSV SGATQNVTSG APHVTQPAVG TANATNTYAP
0101: YSNSVQPGYN AAHYPNYYYN YPQPATDSSV HQGVDQSSGA AYQPLTSFPN SGSYVGPTSN SYYNAGADQT AQAYATNNYY YQKNAWSGGS SGDVHAQTYQ
0201: TYTPSDTNAA QSSCSLPTTS FHYPQQYNQW SNYYDQPAPN CGGFAVAGSS ASDTKSASVG SGYAYPSTQP PPPGTTQRKN DAVAPTAPPQ AAGITGFQSQ
0301: HVNQAPGAPG FQSQHVNQAP GAPGFQSQHV NQAPGAPGFQ SQHVNQAPSA PGFQSQHVNQ APGAPGFQGQ HANQAPGAPG FQSQHVNQAP GAPGFQSQHG
0401: NPSPDTPGFQ SQHVNLAPVT PGFQSQHVNP SPDTPGFPNP YANKTVAVSG FQNHYANQAP AYQQNSTSHS QLPLSNQRDQ QKALHAQGQS SNVYSVNHVN
0501: ENSQPTLQCF TKTVASVNKV HIPTNPRIAP GFPMSMPQTG KKLEVDSSLK PAYVGVNMPK NDVNAAQDGH GAAIQGSFPV SLCTYVERNL SRCKDDAQRS
0601: ATQSIMKEII TKATADGTLH TKNWDIEPLL ALPENAKGTF MTSNAKDSSP FSFSTSRRSP SRRTKSRWEP VAEEKVTNNV EVSKEPAKSN ACTTWENTRR
0701: TGNTWNLGNF VQSRQAPPSQ WNQRPSKKQR IGGNTNLTKN GNASSDSDKE QDLTKYYASS IALTNSPEEK KRREHRSKRF ERGQGASSKS MSSIPHKNGA
0801: ANVYTRGAIS MLNNISNGDG ASLAVEDIDW DALTIKGTCQ EIEKRYLRLT SAPDPATVRP EDVLEKALHM VETSEKNYLY KCDQLKSIRQ DLTVQRIQNE
0901: LTVKVYETHA RLALQAGDLS EYNQCQSQLT RLYGEGIPGC HLEFSAYNLL CVMLHSNNKR DLLSSMASLS KEARLDKTVK HALAVHSAVS SGNYVMFFKL
1001: YKKAPGLNSC LMDLYVERMR FEAIKCMSKS YRPTVPVRYA TRALGFTRVD ELCEANVADG LEECEEWLRA HGAVLAVDEN NGELQIDTKV SSASLYMPEP
1101: DNAVSHGDAS LAVDDFLARA S
0101: YSNSVQPGYN AAHYPNYYYN YPQPATDSSV HQGVDQSSGA AYQPLTSFPN SGSYVGPTSN SYYNAGADQT AQAYATNNYY YQKNAWSGGS SGDVHAQTYQ
0201: TYTPSDTNAA QSSCSLPTTS FHYPQQYNQW SNYYDQPAPN CGGFAVAGSS ASDTKSASVG SGYAYPSTQP PPPGTTQRKN DAVAPTAPPQ AAGITGFQSQ
0301: HVNQAPGAPG FQSQHVNQAP GAPGFQSQHV NQAPGAPGFQ SQHVNQAPSA PGFQSQHVNQ APGAPGFQGQ HANQAPGAPG FQSQHVNQAP GAPGFQSQHG
0401: NPSPDTPGFQ SQHVNLAPVT PGFQSQHVNP SPDTPGFPNP YANKTVAVSG FQNHYANQAP AYQQNSTSHS QLPLSNQRDQ QKALHAQGQS SNVYSVNHVN
0501: ENSQPTLQCF TKTVASVNKV HIPTNPRIAP GFPMSMPQTG KKLEVDSSLK PAYVGVNMPK NDVNAAQDGH GAAIQGSFPV SLCTYVERNL SRCKDDAQRS
0601: ATQSIMKEII TKATADGTLH TKNWDIEPLL ALPENAKGTF MTSNAKDSSP FSFSTSRRSP SRRTKSRWEP VAEEKVTNNV EVSKEPAKSN ACTTWENTRR
0701: TGNTWNLGNF VQSRQAPPSQ WNQRPSKKQR IGGNTNLTKN GNASSDSDKE QDLTKYYASS IALTNSPEEK KRREHRSKRF ERGQGASSKS MSSIPHKNGA
0801: ANVYTRGAIS MLNNISNGDG ASLAVEDIDW DALTIKGTCQ EIEKRYLRLT SAPDPATVRP EDVLEKALHM VETSEKNYLY KCDQLKSIRQ DLTVQRIQNE
0901: LTVKVYETHA RLALQAGDLS EYNQCQSQLT RLYGEGIPGC HLEFSAYNLL CVMLHSNNKR DLLSSMASLS KEARLDKTVK HALAVHSAVS SGNYVMFFKL
1001: YKKAPGLNSC LMDLYVERMR FEAIKCMSKS YRPTVPVRYA TRALGFTRVD ELCEANVADG LEECEEWLRA HGAVLAVDEN NGELQIDTKV SSASLYMPEP
1101: DNAVSHGDAS LAVDDFLARA S
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.