Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G166300.1 | Wheat | cytosol | 97.34 | 96.26 |
| TraesCS2D01G144800.1 | Wheat | plastid | 89.72 | 96.18 |
| HORVU2Hr1G025040.2 | Barley | plastid | 55.48 | 91.86 |
| OQU90370 | Sorghum | plastid | 58.81 | 58.85 |
| Zm00001d022344_P001 | Maize | cytosol | 39.04 | 56.83 |
| Zm00001d022343_P001 | Maize | plastid | 57.12 | 55.76 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 29.94 | 42.47 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 31.64 | 36.96 |
| KRH20952 | Soybean | nucleus | 30.4 | 35.65 |
| KRH11322 | Soybean | nucleus | 30.85 | 35.09 |
| Solyc12g035670.1.1 | Tomato | nucleus | 29.89 | 33.8 |
| CDY08059 | Canola | cytosol, plastid | 18.02 | 33.13 |
| Zm00001d022346_P001 | Maize | cytosol | 48.81 | 31.52 |
| Bra001190.1-P | Field mustard | plastid | 28.81 | 31.1 |
| Bra020761.1-P | Field mustard | cytosol | 28.93 | 31.09 |
| CDY05249 | Canola | nucleus | 20.34 | 31.01 |
| CDX74111 | Canola | plastid | 28.53 | 30.64 |
| AT3G06290.1 | Thale cress | plastid | 29.15 | 30.41 |
| CDY24705 | Canola | cytosol, plastid | 20.4 | 29.71 |
| CDY70818 | Canola | mitochondrion | 5.14 | 23.88 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G141300.1 | EnsemblPlantsGene:TraesCS2A01G141300 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| ncoils:Coil | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg |
| MapMan:16.11.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:86436096..86447809
Molecular Weight (calculated)
195169.0 Da
IEP (calculated)
6.643
GRAVY (calculated)
-0.438
Length
1770 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEASGFGRDA GPLNRGPGSA PLAFGAGAAT APSPAAQPAP VQFPSARPAA PFVPPSSRFP SARPQLSAAA PISHPTSPIP IPAPSARPAA AAPGASGPVR
0101: FPSPLRAVDP GAAAATARHA ARHLQSQPRV AAPSIGRPMH PGISSRSRSP PNLSNQHVNV PSENDNGMGQ RRLVNYADPL FENESAQSSV QMRMQPPETG
0201: KTARSPPLDM SRQFRPSSSL PKLTPTQRAE PHDHVQMPNL SPSKFGIQNQ SPFHDACATF SPLLNSNLVP GIGRPRPASG TSTSSSSVLG GAAQQEMNDH
0301: MREQRFSAPL QSRTMDHSIS KRSRSPTLSY QDVDGAEARH GTGANARRLI NYADTLVDDV SIETSKRMRA PSDIRDNIRP APAGFGSSNV AAQNLRSQAD
0401: IQRSEASLLK VGSQIKSRIG DVRSPPYQQF RPSDTYSKEY STPTFSPPKP SILNSRSVTL PLDDGDDFIP STELEREKQA KAKRLARFNV ELSRPVENIN
0501: DLAKADKQKQ ASSMGKVPVR SNDSTMADMD PPGLAAILGL CSYMCPEPER AERERKGDLD RYERLGGDRN QTTELLAVKK YTRTAERDAE LIRPLPVLQK
0601: TMSYLLSLLD HTYDDSFLGL YNFLWDRMRA IRMDLRMQHF FNQEAISMLE QMIRLHIVAM HELCEYSKGE GFSEGFDAHL NIEQMNKTSV ELFQMYEDHR
0701: RNGVLFSTEQ EFRGYYALLK LDKHPGYKVE PSELSLDLAK MSREIRGSPD VLFAREVARA CRMGNYIAFF RLARKATYLQ ACLMHAHFAK VRRQALASLH
0801: SGLQIGQGIP ISHVVEWLAM EDEDIESLLE YHGFGSKQYE GPYLVKEGPF LKSESDFPSG CSELVHSKKS QRIVDDVSSG PVCAPTGQKA TVAPYSVGFP
0901: SPASKREPVL PRSALVIPVI AKKEFGPSFS GPVSPTSSGQ ITSPYSGLFS PKAGNKQFNS TYSSPISPTG SRKGSVPVIL STSPRATKHA LSHTGWMDDQ
1001: RVASPKAKGK ITMTDDFIIS EDQNGDFVDF SREQMEIPQS EAYTQHVDAL VATIVSHPLA DGVSSDYAHM HEEEDELRAH GSGSDTDLDD ESTSYHQVNL
1101: IERVWPTGSL LPGHEDGDDQ NNNETTYDSL PIVVSPKKTI SDERLKLILR KWRQRAADQR SLREQKNALA IAALNSLSLG PPVHQTAVVP KHAVHELDIG
1201: HAFKERYTRQ QRSWSRLNVS ELVGPILTEK KPDARCICWK MLVLVPPGAM KSQSNNVASR WLLKKLMGSG NEDNGLLLTS ADLSIWRTWL SSPSVCCLSV
1301: VRASDQQVIG NEIADSTNCI VFVVSESIPW EMQKARFSSL LASIPPQSCL PLLILSGDTY NEGYDYASQN VIDKLGVGGL SEGKIASSLV VFLAGSCTEG
1401: YINGFFDDDK LREGLKWMAN SFPLQPDVIL VKTHELLLNY LNPSLELLNK RVAPEVGPEH CISVFNNAVS QLGEEILAAA YRSPNQWPAL EIDLLERWSS
1501: ERLFTEMFLP SIGWSSPSRI QPLVETVKCL QLPGFSDDLS WLKQGSYMGR QIQDQKLYLE ECLTRYLTQS AQLLNGAQAV AEAKIMVQKG VDLELRDSNH
1601: YLVPNWVTIF RRIYNWRLAR LSTGDFSEAY VLSQRLYQPP ATQHGLTANS DTIGEAPILE DHDMMPAVPS GLSLDEIIEV SCDLDSDSPP LRPPSPPLPT
1701: PACDEPQALA HIDGEVNPMH GATYDDTHDA PRRVELRDLV PLKWDDELAK LEQQCAKLQS KIDEKLFIYF
0101: FPSPLRAVDP GAAAATARHA ARHLQSQPRV AAPSIGRPMH PGISSRSRSP PNLSNQHVNV PSENDNGMGQ RRLVNYADPL FENESAQSSV QMRMQPPETG
0201: KTARSPPLDM SRQFRPSSSL PKLTPTQRAE PHDHVQMPNL SPSKFGIQNQ SPFHDACATF SPLLNSNLVP GIGRPRPASG TSTSSSSVLG GAAQQEMNDH
0301: MREQRFSAPL QSRTMDHSIS KRSRSPTLSY QDVDGAEARH GTGANARRLI NYADTLVDDV SIETSKRMRA PSDIRDNIRP APAGFGSSNV AAQNLRSQAD
0401: IQRSEASLLK VGSQIKSRIG DVRSPPYQQF RPSDTYSKEY STPTFSPPKP SILNSRSVTL PLDDGDDFIP STELEREKQA KAKRLARFNV ELSRPVENIN
0501: DLAKADKQKQ ASSMGKVPVR SNDSTMADMD PPGLAAILGL CSYMCPEPER AERERKGDLD RYERLGGDRN QTTELLAVKK YTRTAERDAE LIRPLPVLQK
0601: TMSYLLSLLD HTYDDSFLGL YNFLWDRMRA IRMDLRMQHF FNQEAISMLE QMIRLHIVAM HELCEYSKGE GFSEGFDAHL NIEQMNKTSV ELFQMYEDHR
0701: RNGVLFSTEQ EFRGYYALLK LDKHPGYKVE PSELSLDLAK MSREIRGSPD VLFAREVARA CRMGNYIAFF RLARKATYLQ ACLMHAHFAK VRRQALASLH
0801: SGLQIGQGIP ISHVVEWLAM EDEDIESLLE YHGFGSKQYE GPYLVKEGPF LKSESDFPSG CSELVHSKKS QRIVDDVSSG PVCAPTGQKA TVAPYSVGFP
0901: SPASKREPVL PRSALVIPVI AKKEFGPSFS GPVSPTSSGQ ITSPYSGLFS PKAGNKQFNS TYSSPISPTG SRKGSVPVIL STSPRATKHA LSHTGWMDDQ
1001: RVASPKAKGK ITMTDDFIIS EDQNGDFVDF SREQMEIPQS EAYTQHVDAL VATIVSHPLA DGVSSDYAHM HEEEDELRAH GSGSDTDLDD ESTSYHQVNL
1101: IERVWPTGSL LPGHEDGDDQ NNNETTYDSL PIVVSPKKTI SDERLKLILR KWRQRAADQR SLREQKNALA IAALNSLSLG PPVHQTAVVP KHAVHELDIG
1201: HAFKERYTRQ QRSWSRLNVS ELVGPILTEK KPDARCICWK MLVLVPPGAM KSQSNNVASR WLLKKLMGSG NEDNGLLLTS ADLSIWRTWL SSPSVCCLSV
1301: VRASDQQVIG NEIADSTNCI VFVVSESIPW EMQKARFSSL LASIPPQSCL PLLILSGDTY NEGYDYASQN VIDKLGVGGL SEGKIASSLV VFLAGSCTEG
1401: YINGFFDDDK LREGLKWMAN SFPLQPDVIL VKTHELLLNY LNPSLELLNK RVAPEVGPEH CISVFNNAVS QLGEEILAAA YRSPNQWPAL EIDLLERWSS
1501: ERLFTEMFLP SIGWSSPSRI QPLVETVKCL QLPGFSDDLS WLKQGSYMGR QIQDQKLYLE ECLTRYLTQS AQLLNGAQAV AEAKIMVQKG VDLELRDSNH
1601: YLVPNWVTIF RRIYNWRLAR LSTGDFSEAY VLSQRLYQPP ATQHGLTANS DTIGEAPILE DHDMMPAVPS GLSLDEIIEV SCDLDSDSPP LRPPSPPLPT
1701: PACDEPQALA HIDGEVNPMH GATYDDTHDA PRRVELRDLV PLKWDDELAK LEQQCAKLQS KIDEKLFIYF
0001: MGTDAVEIGR SQDSKRKSRS DILPDQNMGF SRRNQSPVSG FENGNLVDGF QPLSSRTWMR SPSSAENNPV RSRSNPNQLI HQEQTGNSSF PYAHEVAEIQ
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.