Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH36229 | Soybean | nucleus | 95.53 | 95.15 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 34.39 | 68.65 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 21.87 | 55.28 |
| Solyc05g054910.2.1 | Tomato | nucleus | 50.8 | 53.17 |
| AT2G39340.1 | Thale cress | nucleus | 52.78 | 52.78 |
| CDX93271 | Canola | nucleus | 50.3 | 51.32 |
| CDY07001 | Canola | nucleus | 49.9 | 51.12 |
| Bra017081.1-P | Field mustard | nucleus | 49.9 | 51.07 |
| CDX74854 | Canola | nucleus | 50.1 | 50.76 |
| Bra005050.1-P | Field mustard | nucleus | 50.0 | 50.65 |
| Bra005052.1-P | Field mustard | nucleus | 50.0 | 50.65 |
| CDY44640 | Canola | nucleus | 50.3 | 50.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.03 | 46.94 |
| Os05t0462600-01 | Rice | mitochondrion | 37.77 | 45.51 |
| TraesCS1A01G287600.8 | Wheat | nucleus | 41.65 | 43.24 |
| HORVU1Hr1G071780.21 | Barley | nucleus | 41.35 | 43.11 |
| TraesCS1D01G286500.8 | Wheat | nucleus | 41.35 | 43.11 |
| TraesCS1B01G297000.5 | Wheat | nucleus | 41.45 | 43.03 |
| OQU87820 | Sorghum | nucleus | 39.76 | 42.69 |
| Os01t0836400-02 | Rice | nucleus | 38.77 | 42.67 |
| OQU78144 | Sorghum | nucleus | 41.45 | 41.7 |
| Zm00001d010546_P003 | Maize | nucleus | 42.15 | 41.01 |
| TraesCS3A01G354400.3 | Wheat | nucleus | 42.54 | 39.63 |
| Zm00001d038393_P012 | Maize | nucleus | 39.76 | 38.95 |
| TraesCS3D01G348300.1 | Wheat | cytosol | 42.45 | 38.57 |
| TraesCS3B01G387400.1 | Wheat | nucleus | 42.64 | 38.27 |
| Zm00001d003061_P001 | Maize | nucleus | 4.57 | 37.4 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 42.15 | 36.05 |
| HORVU1Hr1G029080.1 | Barley | extracellular | 5.37 | 31.76 |
Protein Annotations
| EMBL:ACUP02012777 | EnsemblPlants:KRG92986 | EnsemblPlantsGene:GLYMA_20G242100 | EntrezGene:100804185 | Gene3D:1.25.40.990 | InterPro:IPR000717 |
| InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 |
| ProteinID:KRG92986 | ProteinID:KRG92986.1 | SEG:seg | UniParc:UPI0003DEC0DA | UniProt:A0A0R0ES49 | MapMan:16.11.2.1 |
Description
hypothetical protein
Coordinates
chr20:-:47292235..47302316
Molecular Weight (calculated)
111128.0 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.736
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANEGSNAET LAPAEPHLFE NRHVDANQHH PTSYVPTTTG SEAAPWTVHS STGNGVYSNP TYQYDQHPQP PGRSIQDCQN VSSVAGNSSN LGTANVTQDY
0101: NAYASYPSSS NPYGYGSMGY SGYYNNYQQQ PNHTYSQPVG AYQNTGAPYQ PISSFQNTGS YAGSASYSST YYNPADYQTT GGYQNSSGYG NQATMWNSGS
0201: YSSHPYTNYT PDSGGSYSSG TATTSVQYQQ QYKQWADYYN QTEVSCAPGT ENLSVTSSST LDCPIPAVTS GYATPNSQPP QSYPPFWRQE SSSSSIPSFQ
0301: PATVNSGDRD GYWKHGAQSS QIQQTNPIQP NYQSPLDLKS SYDKFQDQQK TVSSQGTNLY LPPPPPPPLP SQLVNLAPVQ SVSSPDAKRV SKLQIPTNPR
0401: IASNLTFGQP KAEKDSSTTS SAPKPVYIAV SLPKPSEKIS SNDAANSILK PGMFPKSLRG YVERALARCK DDKQMVACQA VMKEIITKAT ADGTLNTRNW
0501: DMEPLFPMPD ADVINKDSSM SLAQDSLLPK FKKSPRRSKS RWEPMPEEKP VDNPMLISND TVKYSNWVPN EKDRKVAVEN KESKDGLRNT KFSPLLQRLS
0601: SKALQRPFKK QRLTDASIAS ENGDASSDSD KEQSLTAYYS AAMVFSDTPE ERKRRENRSK RFDLGQGRRT ENNHSRKKHA GGGSFYNRRA SALVLSKSFD
0701: DGASKAVEDI DWDALTVKGT CQEIEKRYLR LTSAPDPATV RPEEVLEKAL LMIQNSQKNY LYKCDQLKSI RQDLTVQRIR NQLTVKVYET HARLALEFGD
0801: LFEYNQCQSQ LQTLYAEGIE GSDMEFAAYN LLCVIMHSNN NRDLVSSMAR LSHEAKKDEA VKHALAVRAA VTSGNYIAFF RLYKAAPNLN TCLMDLYVEK
0901: MRYKAVNCMC RSYRPTLPVS YISQVLGFST GVATNGVSDE RETDALEECS EWLKAHGASI ITDNNGDMLL DTKVSSSNLF VPEPEDAVAH GDANLAVDDF
1001: LARAPL
0101: NAYASYPSSS NPYGYGSMGY SGYYNNYQQQ PNHTYSQPVG AYQNTGAPYQ PISSFQNTGS YAGSASYSST YYNPADYQTT GGYQNSSGYG NQATMWNSGS
0201: YSSHPYTNYT PDSGGSYSSG TATTSVQYQQ QYKQWADYYN QTEVSCAPGT ENLSVTSSST LDCPIPAVTS GYATPNSQPP QSYPPFWRQE SSSSSIPSFQ
0301: PATVNSGDRD GYWKHGAQSS QIQQTNPIQP NYQSPLDLKS SYDKFQDQQK TVSSQGTNLY LPPPPPPPLP SQLVNLAPVQ SVSSPDAKRV SKLQIPTNPR
0401: IASNLTFGQP KAEKDSSTTS SAPKPVYIAV SLPKPSEKIS SNDAANSILK PGMFPKSLRG YVERALARCK DDKQMVACQA VMKEIITKAT ADGTLNTRNW
0501: DMEPLFPMPD ADVINKDSSM SLAQDSLLPK FKKSPRRSKS RWEPMPEEKP VDNPMLISND TVKYSNWVPN EKDRKVAVEN KESKDGLRNT KFSPLLQRLS
0601: SKALQRPFKK QRLTDASIAS ENGDASSDSD KEQSLTAYYS AAMVFSDTPE ERKRRENRSK RFDLGQGRRT ENNHSRKKHA GGGSFYNRRA SALVLSKSFD
0701: DGASKAVEDI DWDALTVKGT CQEIEKRYLR LTSAPDPATV RPEEVLEKAL LMIQNSQKNY LYKCDQLKSI RQDLTVQRIR NQLTVKVYET HARLALEFGD
0801: LFEYNQCQSQ LQTLYAEGIE GSDMEFAAYN LLCVIMHSNN NRDLVSSMAR LSHEAKKDEA VKHALAVRAA VTSGNYIAFF RLYKAAPNLN TCLMDLYVEK
0901: MRYKAVNCMC RSYRPTLPVS YISQVLGFST GVATNGVSDE RETDALEECS EWLKAHGASI ITDNNGDMLL DTKVSSSNLF VPEPEDAVAH GDANLAVDDF
1001: LARAPL
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.