Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G025040.2 | |
| HORVU2Hr1G030640.1 | |
| HORVU5Hr1G059930.4 | |
| HORVU7Hr1G113200.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G286500.8 | Wheat | nucleus | 93.99 | 93.99 |
| TraesCS1B01G297000.5 | Wheat | nucleus | 93.47 | 93.09 |
| TraesCS1A01G287600.8 | Wheat | nucleus | 92.95 | 92.57 |
| Os05t0462600-01 | Rice | mitochondrion | 60.0 | 69.34 |
| OQU78144 | Sorghum | nucleus | 71.19 | 68.7 |
| Zm00001d010546_P003 | Maize | nucleus | 70.78 | 66.05 |
| Zm00001d038393_P012 | Maize | nucleus | 68.29 | 64.17 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 30.05 | 57.54 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 58.96 | 48.38 |
| Zm00001d003061_P001 | Maize | nucleus | 6.01 | 47.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.94 | 46.94 |
| HORVU1Hr1G029080.1 | Barley | extracellular | 7.56 | 42.94 |
| Solyc05g054910.2.1 | Tomato | nucleus | 41.55 | 41.73 |
| KRG92986 | Soybean | nucleus | 43.11 | 41.35 |
| KRH36229 | Soybean | nucleus | 42.69 | 40.79 |
| CDX93271 | Canola | nucleus | 41.45 | 40.57 |
| CDX74854 | Canola | nucleus | 41.66 | 40.48 |
| Bra005052.1-P | Field mustard | nucleus | 41.55 | 40.38 |
| Bra005050.1-P | Field mustard | nucleus | 41.55 | 40.38 |
| CDY44640 | Canola | nucleus | 42.07 | 40.32 |
| AT2G39340.1 | Thale cress | nucleus | 41.55 | 39.86 |
| CDY07001 | Canola | nucleus | 40.52 | 39.82 |
| Bra017081.1-P | Field mustard | nucleus | 40.52 | 39.78 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 12.54 | 30.4 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G071780.21 | EnsemblPlantsGene:HORVU1Hr1G071780 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | UniParc:UPI000296E28D |
| UniProt:M0XA05 | MapMan:16.11.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:494875168..494884218
Molecular Weight (calculated)
105236.0 Da
IEP (calculated)
8.564
GRAVY (calculated)
-0.672
Length
965 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHGAAPAA GSDAARVEVS GTGQTNQPAY PPFVSGDHSW SSSTGAAAAA ASWNYPVANQ SQDAVYYDPQ RDVSVSGDNQ NVASSAPPAV QSTMGLTNAS
101: HSHVPYASSL QQGYNPAEYA NYYYNYPQAT NSCSAQQGGA NQHPGAAYQP LTSFQNSGSY IDPSSNTYYN AGGHQTAPGY ATSNYYYQTD TRNDGSSGNN
201: YAQSYQNYPS SDTNAAQSSS TVPANSFSYQ QQYNQWPYYY NQSVPTPAGN PVAGSSNIDN TAVNTTSGYS YPSMEPPPPG TTPWKSNSGA SVAPPVQVPS
301: VPEPQNQYVQ HAQVTPVLQN QYAYQAPGVP VAQNYYANQA PAYPQNNMNV NQAPLNNHGD QQKSGSLTTG IFSENKTQIP IIPRIAPGFS MVIPKSEKKI
401: VGADLAKKPA YVSVSVPKND GAAVQHGPDA RSLPFSLRNY ATRNLSRCKD EAQRAACQSM IQQITGKAIS NGTLLTKNWD TEPLIPLQEN LLTMTETSSA
501: NNSSSLSKST PKRRLKSRWE PVPEEKVTEK VEQLAKALMN GNTHNNLKAQ IRMGDSWNLG KSLQSPHTPS NKIAHRLSKK QKMGSYSSVV QNGNASSDSD
601: KEKDLTKYYA NASALANSPE EKKRREHRSK RFEKSKDSSS KSRNSAVNKD AGAHIHTRRP ISALVTGSYK DGSSLAVEDM DWDALTVKGT CQEIEKRYLR
701: LTSAPDPSTV RPEHVLEKAL SMVETSQKNY LYKCDQLKSI RQDLTVQRIQ NELTVKVYET HARLALQAGD LPEFNQCQSQ LKRLYREGNN GCYFEFAAYN
801: LLCVMLHSSN KRDLLSSMAS LSKEAKQDGA VKHALAVHAA VSSGNYVIFF KLYKQGPNLN SCLMDLYVER MRFEAIKCMS RSYRPTVPVG YVAQVLGFLL
901: NGDDRSEECE IWLKAHGAVL SVDNSGELQI DTKASSSMLF MPEPENAVAH GDASLAVNDF FARTS
101: HSHVPYASSL QQGYNPAEYA NYYYNYPQAT NSCSAQQGGA NQHPGAAYQP LTSFQNSGSY IDPSSNTYYN AGGHQTAPGY ATSNYYYQTD TRNDGSSGNN
201: YAQSYQNYPS SDTNAAQSSS TVPANSFSYQ QQYNQWPYYY NQSVPTPAGN PVAGSSNIDN TAVNTTSGYS YPSMEPPPPG TTPWKSNSGA SVAPPVQVPS
301: VPEPQNQYVQ HAQVTPVLQN QYAYQAPGVP VAQNYYANQA PAYPQNNMNV NQAPLNNHGD QQKSGSLTTG IFSENKTQIP IIPRIAPGFS MVIPKSEKKI
401: VGADLAKKPA YVSVSVPKND GAAVQHGPDA RSLPFSLRNY ATRNLSRCKD EAQRAACQSM IQQITGKAIS NGTLLTKNWD TEPLIPLQEN LLTMTETSSA
501: NNSSSLSKST PKRRLKSRWE PVPEEKVTEK VEQLAKALMN GNTHNNLKAQ IRMGDSWNLG KSLQSPHTPS NKIAHRLSKK QKMGSYSSVV QNGNASSDSD
601: KEKDLTKYYA NASALANSPE EKKRREHRSK RFEKSKDSSS KSRNSAVNKD AGAHIHTRRP ISALVTGSYK DGSSLAVEDM DWDALTVKGT CQEIEKRYLR
701: LTSAPDPSTV RPEHVLEKAL SMVETSQKNY LYKCDQLKSI RQDLTVQRIQ NELTVKVYET HARLALQAGD LPEFNQCQSQ LKRLYREGNN GCYFEFAAYN
801: LLCVMLHSSN KRDLLSSMAS LSKEAKQDGA VKHALAVHAA VSSGNYVIFF KLYKQGPNLN SCLMDLYVER MRFEAIKCMS RSYRPTVPVG YVAQVLGFLL
901: NGDDRSEECE IWLKAHGAVL SVDNSGELQI DTKASSSMLF MPEPENAVAH GDASLAVNDF FARTS
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.