Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G029080.1 | |
| HORVU1Hr1G071780.21 | |
| HORVU2Hr1G025040.2 | |
| HORVU3Hr1G087140.16 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 98.82 | 99.4 |
| TraesCS2B01G192400.1 | Wheat | cytosol, mitochondrion | 98.82 | 99.4 |
| TraesCS2A01G166500.1 | Wheat | cytosol, mitochondrion | 98.82 | 99.4 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 86.98 | 85.47 |
| KXG36700 | Sorghum | cytosol | 81.07 | 79.65 |
| KRH10567 | Soybean | endoplasmic reticulum | 74.56 | 74.12 |
| AT3G50360.1 | Thale cress | cytosol | 73.96 | 73.96 |
| Os07t0618800-01 | Rice | plasma membrane | 91.12 | 73.68 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 71.01 | 72.73 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 69.82 | 72.39 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 71.6 | 72.02 |
| PGSC0003DMT400010295 | Potato | cytosol, mitochondrion | 71.6 | 72.02 |
| Solyc04g026350.2.1 | Tomato | cytosol | 73.37 | 71.68 |
| KRH43884 | Soybean | cytosol | 51.48 | 66.41 |
| CDX83123 | Canola | golgi | 74.56 | 65.97 |
| KRG98826 | Soybean | cytosol | 60.35 | 64.97 |
| KRG98823 | Soybean | cytosol | 60.35 | 64.97 |
| CDY62753 | Canola | cytosol | 75.15 | 63.5 |
| HORVU7Hr1G113200.1 | Barley | cytosol | 66.27 | 61.88 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 60.35 | 59.65 |
| CDX75623 | Canola | extracellular | 63.31 | 59.44 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 70.41 | 58.91 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 40.83 | 38.33 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 36.69 | 37.35 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 37.87 | 34.78 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 38.46 | 32.66 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 38.46 | 30.23 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 35.5 | 28.04 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 24.26 | 27.15 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 33.73 | 25.79 |
| HORVU7Hr1G075240.1 | Barley | cytosol, plastid | 27.22 | 23.59 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 30.18 | 20.65 |
| HORVU1Hr1G080000.3 | Barley | cytosol | 22.49 | 20.32 |
| HORVU1Hr1G050720.2 | Barley | cytosol | 23.08 | 14.94 |
Protein Annotations
| EMBL:AK355688 | EnsemblPlants:HORVU2Hr1G030640.1 | EnsemblPlantsGene:HORVU2Hr1G030640 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF167 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00020049FD | UniProt:F2CVN5 | MapMan:14.6.1.1 | MapMan:16.11.2.3 | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CVN5]
Coordinates
chrchr2H:-:113058896..113061464
Molecular Weight (calculated)
19400.8 Da
IEP (calculated)
4.487
GRAVY (calculated)
-0.948
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTMKGQTRR ERPRTRPHGL TQQKRQEIKE AFDLFDTDNS GTIDAKELNV AMRALGFEMT EEQINQMIAD VDKDGSGSID YEEFEHMMTA KIGERDTKEE
101: LTKAFRIIDQ DKNGKISNVD IQRIAKELGE NFTLQEIQEM VQEADQNGDG EIDFGEFARM MKKTSYGGY
101: LTKAFRIIDQ DKNGKISNVD IQRIAKELGE NFTLQEIQEM VQEADQNGDG EIDFGEFARM MKKTSYGGY
001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
Arabidopsis Description
CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.