Factsheet for HORVU1Hr1G050720.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G208700.1	Wheat	cytosol	53.64	73.3
TraesCS1A01G193700.1	Wheat	cytosol	53.64	72.54
TraesCS1D01G197600.1	Wheat	cytosol	53.64	72.16
HORVU1Hr1G080000.3	Barley	cytosol	50.57	70.59
VIT_02s0012g02060.t01	Wine grape	cytosol	43.3	69.33
KRH25249	Soybean	cytosol	42.53	68.1
VIT_16s0039g01880.t01	Wine grape	cytosol	41.76	66.87
PGSC0003DMT400038352	Potato	cytosol	41.76	66.87
KRH30413	Soybean	cytosol	40.61	66.67
Solyc03g097100.1.1	Tomato	cytosol	41.0	65.64
Bra040770.1-P	Field mustard	cytosol	41.0	64.46
AT1G32250.1	Thale cress	cytosol	41.0	64.46
CDY54677	Canola	cytosol	41.0	64.46
CDY61824	Canola	cytosol	41.0	64.46
Os01t0505600-01	Rice	cytosol	49.43	61.14
OQU84270	Sorghum	cytosol, plastid	48.28	57.53
HORVU5Hr1G014070.2	Barley	cytosol	21.46	33.73
HORVU3Hr1G079210.4	Barley	cytosol	22.22	31.52
HORVU5Hr1G044710.4	Barley	cytosol	21.07	30.56
HORVU3Hr1G038010.1	Barley	cytosol, plastid	22.99	30.15
HORVU3Hr1G052770.1	Barley	cytosol	26.82	28.34
HORVU2Hr1G016740.4	Barley	cytosol	22.99	27.91
HORVU5Hr1G014060.1	Barley	cytosol, plastid	21.84	26.64
HORVU4Hr1G026290.3	Barley	cytosol, plastid	22.22	26.24
HORVU0Hr1G001280.1	Barley	cytosol	14.94	25.83
HORVU2Hr1G030640.1	Barley	cytosol	14.94	23.08
HORVU7Hr1G075240.1	Barley	cytosol, plastid	16.48	22.05
HORVU7Hr1G113200.1	Barley	cytosol	14.18	20.44

Protein Annotations

EnsemblPlants:HORVU1Hr1G050720.2	EnsemblPlantsGene:HORVU1Hr1G050720	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44256	PANTHER:PTHR44256:SF1
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000B4703F6	UniProt:A0A287FIN1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:376099097..376100144

Molecular Weight (calculated)

15773.4 Da

IEP (calculated)

4.351

GRAVY (calculated)

-0.148

Length

261 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXFR SFDRNKDGSL TQLELGSLLR SLGLKPSTDE LDALIHRADT NSNGLVEFSE FVALVAPSLL DDRSPYSEDQ LRRLFEIFDR
201: DGNGFITAAE LAHSMAKLGH ALTAKELTGM IEEADTDGDG RIDFREFSRA ITAAAFDNVF S

Best Arabidopsis Sequence Match ( AT1G32250.1 )
(BLAST)

001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGVKPSP DQFETLIDKA DTKSNGLVEF PEFVALVSPE LLSPAKRTTP YTEEQLLRLF
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG

Arabidopsis Description

CML17Probable calcium-binding protein CML17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.