Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040770.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY54677 | Canola | cytosol | 99.4 | 99.4 |
| AT1G32250.1 | Thale cress | cytosol | 93.37 | 93.37 |
| Solyc03g097100.1.1 | Tomato | cytosol | 69.28 | 70.55 |
| CDY58544 | Canola | cytosol | 65.06 | 63.91 |
| TraesCS1B01G208700.1 | Wheat | cytosol | 70.48 | 61.26 |
| TraesCS1A01G193700.1 | Wheat | cytosol | 70.48 | 60.62 |
| TraesCS1D01G197600.1 | Wheat | cytosol | 70.48 | 60.31 |
| Os01t0505600-01 | Rice | cytosol | 69.88 | 54.98 |
| HORVU1Hr1G080000.3 | Barley | cytosol | 61.45 | 54.55 |
| OQU84270 | Sorghum | cytosol, plastid | 71.08 | 53.88 |
| CDY21702 | Canola | cytosol | 46.39 | 49.36 |
| CDX81878 | Canola | cytosol | 46.39 | 49.36 |
| CDY04172 | Canola | cytosol | 47.59 | 49.07 |
| CDY59874 | Canola | cytosol | 47.59 | 49.07 |
| CDY48076 | Canola | cytosol | 46.99 | 48.15 |
| CDY51605 | Canola | cytosol | 46.99 | 48.15 |
| CDY26151 | Canola | cytosol | 44.58 | 47.13 |
| CDY19221 | Canola | cytosol | 44.58 | 47.13 |
| CDY65072 | Canola | cytosol | 39.76 | 44.3 |
| CDY12321 | Canola | cytosol | 38.55 | 44.14 |
| CDX92401 | Canola | cytosol | 35.54 | 44.03 |
| CDY55678 | Canola | cytosol | 39.16 | 43.62 |
| CDX96148 | Canola | cytosol | 39.16 | 43.62 |
| CDY56411 | Canola | cytosol | 38.55 | 42.95 |
| CDY04474 | Canola | cytosol | 38.55 | 42.95 |
| CDX99690 | Canola | cytosol | 38.55 | 42.95 |
| CDY27651 | Canola | cytosol | 38.55 | 42.67 |
| HORVU1Hr1G050720.2 | Barley | cytosol | 64.46 | 41.0 |
| CDY06478 | Canola | cytosol | 35.54 | 39.07 |
| CDX92965 | Canola | cytosol | 36.14 | 38.96 |
| CDY34215 | Canola | cytosol | 35.54 | 37.82 |
| CDY10686 | Canola | cytosol | 34.94 | 37.42 |
| CDY48191 | Canola | cytosol | 39.76 | 36.87 |
| CDX77060 | Canola | cytosol | 39.76 | 36.67 |
| CDX75970 | Canola | cytosol | 23.49 | 34.21 |
| CDY57144 | Canola | cytosol | 29.52 | 33.56 |
| CDX94883 | Canola | cytosol | 22.29 | 33.33 |
| CDY40824 | Canola | cytosol | 35.54 | 32.78 |
| CDY10325 | Canola | cytosol | 22.29 | 32.74 |
| CDY30947 | Canola | cytosol | 39.16 | 31.1 |
| CDY26556 | Canola | cytosol | 26.51 | 29.73 |
| CDY15991 | Canola | cytosol | 26.51 | 29.73 |
| CDY31259 | Canola | cytosol | 25.9 | 29.05 |
| CDY30070 | Canola | cytosol | 25.9 | 29.05 |
| CDY21044 | Canola | cytosol | 25.9 | 29.05 |
| CDX98074 | Canola | cytosol | 25.9 | 29.05 |
| CDY21220 | Canola | cytosol | 38.55 | 28.96 |
| CDX75623 | Canola | extracellular | 28.31 | 26.11 |
| CDX83123 | Canola | golgi | 28.31 | 24.61 |
| CDY62753 | Canola | cytosol | 28.92 | 24.0 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078JC62 | UniProt:A0A078JC62 | EnsemblPlants:CDY61824 | ProteinID:CDY61824 |
| ProteinID:CDY61824.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00034408001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR44256 | PANTHER:PTHR44256:SF2 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000253E880 | SEG:seg |
Description
BnaA05g36510DBnaA05g36510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC62]
Coordinates
chrLK034043:-:26575..27075
Molecular Weight (calculated)
18654.0 Da
IEP (calculated)
4.542
GRAVY (calculated)
-0.436
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGLKPSP DQFETLIDKA DTKSNGLVEF PEFVSLVSPE LLTEEKTRTP YTEEQLLRLF
101: RIFDTDGNGF ITAKELAHSM ARLGHALTVA ELTGMIKEAD SDGDGRINFQ EFSKAINSAA FDDLWG
101: RIFDTDGNGF ITAKELAHSM ARLGHALTVA ELTGMIKEAD SDGDGRINFQ EFSKAINSAA FDDLWG
001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGVKPSP DQFETLIDKA DTKSNGLVEF PEFVALVSPE LLSPAKRTTP YTEEQLLRLF
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG
Arabidopsis Description
CML17Probable calcium-binding protein CML17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQN4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.