Factsheet for TraesCS1D01G197600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G193700.1	Wheat	cytosol	98.45	98.96
TraesCS1B01G208700.1	Wheat	cytosol	97.42	98.95
HORVU1Hr1G080000.3	Barley	cytosol	83.51	86.63
VIT_02s0012g02060.t01	Wine grape	cytosol	62.89	74.85
VIT_16s0039g01880.t01	Wine grape	cytosol	62.37	74.23
PGSC0003DMT400038352	Potato	cytosol	61.86	73.62
Os01t0505600-01	Rice	cytosol	79.9	73.46
KRH25249	Soybean	cytosol	61.34	73.01
Solyc03g097100.1.1	Tomato	cytosol	60.31	71.78
KRH30413	Soybean	cytosol	58.25	71.07
Bra040770.1-P	Field mustard	cytosol	60.31	70.48
CDY61824	Canola	cytosol	60.31	70.48
AT1G32250.1	Thale cress	cytosol	60.31	70.48
CDY54677	Canola	cytosol	60.31	70.48
OQU84270	Sorghum	cytosol, plastid	74.23	65.75
HORVU1Hr1G050720.2	Barley	cytosol	72.16	53.64
TraesCS5D01G068100.1	Wheat	cytosol	32.99	39.26
TraesCS3D01G188600.1	Wheat	cytosol	33.51	38.92
TraesCS5D01G068000.1	Wheat	cytosol	32.99	38.1
TraesCS5D01G392200.1	Wheat	cytosol	28.35	35.48
TraesCS3D01G194500.2	Wheat	cytosol	28.35	34.59
TraesCS3D01G328300.1	Wheat	cytosol	31.44	33.52
TraesCS5D01G153400.1	Wheat	cytosol	30.93	33.33
TraesCS3D01G217900.1	Wheat	cytosol	41.24	31.37
TraesCS7D01G313100.1	Wheat	cytosol	23.71	31.08
TraesCS4D01G126100.1	Wheat	cytosol	35.57	28.63
TraesCS1D01G308000.1	Wheat	cytosol	21.65	28.0
TraesCS2D01G173900.1	Wheat	cytosol, mitochondrion	21.13	24.4
TraesCS5D01G392100.1	Wheat	mitochondrion, nucleus	0.52	0.73

Protein Annotations

EnsemblPlants:TraesCS1D01G197600.1	EnsemblPlantsGene:TraesCS1D01G197600	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR44256	PANTHER:PTHR44256:SF2
PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473
TIGR:cd00051	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:278945929..278946513

Molecular Weight (calculated)

21214.3 Da

IEP (calculated)

4.174

GRAVY (calculated)

-0.531

Length

194 amino acids

Sequence
(BLAST)

001: MSEAPATTAA AGDDPDATAT ANHHQQQQQA QAQAQPETQD DADQLSELRQ IFRSFDRNKD GSLTQLELGS LLRSLGLKPS TDELDALIHR ADTNSNGLVE
101: FSEFVALVSP ELLDDRSPYS EDQLRRLFEI FDRDGNGFIT AAELAHSMAK LGHALTAKEL TGMIEEADTD GDGRINFREF SRAITAAAFD NVFS

Best Arabidopsis Sequence Match ( AT1G32250.1 )
(BLAST)

001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGVKPSP DQFETLIDKA DTKSNGLVEF PEFVALVSPE LLSPAKRTTP YTEEQLLRLF
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG

Arabidopsis Description

CML17Probable calcium-binding protein CML17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQN4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.