Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G208700.1 | Wheat | cytosol | 86.63 | 84.82 |
| TraesCS1D01G197600.1 | Wheat | cytosol | 86.63 | 83.51 |
| TraesCS1A01G193700.1 | Wheat | cytosol | 86.1 | 83.42 |
| VIT_02s0012g02060.t01 | Wine grape | cytosol | 58.82 | 67.48 |
| VIT_16s0039g01880.t01 | Wine grape | cytosol | 57.22 | 65.64 |
| PGSC0003DMT400038352 | Potato | cytosol | 57.22 | 65.64 |
| Os01t0505600-01 | Rice | cytosol | 73.8 | 65.4 |
| KRH25249 | Soybean | cytosol | 56.68 | 65.03 |
| Solyc03g097100.1.1 | Tomato | cytosol | 56.15 | 64.42 |
| KRH30413 | Soybean | cytosol | 54.55 | 64.15 |
| Bra040770.1-P | Field mustard | cytosol | 54.55 | 61.45 |
| AT1G32250.1 | Thale cress | cytosol | 54.55 | 61.45 |
| CDY54677 | Canola | cytosol | 54.55 | 61.45 |
| CDY61824 | Canola | cytosol | 54.55 | 61.45 |
| OQU84270 | Sorghum | cytosol, plastid | 69.52 | 59.36 |
| HORVU1Hr1G050720.2 | Barley | cytosol | 70.59 | 50.57 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 29.41 | 33.13 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 29.41 | 30.56 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 29.95 | 30.43 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 32.09 | 30.15 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 37.43 | 28.34 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 32.09 | 27.91 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 30.48 | 26.64 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 21.39 | 26.49 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 28.88 | 24.43 |
| HORVU2Hr1G030640.1 | Barley | cytosol | 20.32 | 22.49 |
| HORVU7Hr1G075240.1 | Barley | cytosol, plastid | 22.99 | 22.05 |
| HORVU7Hr1G113200.1 | Barley | cytosol | 19.25 | 19.89 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G080000.3 | EnsemblPlantsGene:HORVU1Hr1G080000 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44256 | PANTHER:PTHR44256:SF1 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000B467250 | UniProt:A0A287GF95 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:524300228..524300793
Molecular Weight (calculated)
20629.9 Da
IEP (calculated)
4.347
GRAVY (calculated)
-0.445
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: LCKASYRSPR STRTTVAARD DPDATANANQ QQQAQPEAQD DVDQLSELRQ IFRSFDRNKD GSLTQLELGS LLRSLGLKPC TDELDALIHR ADTNSEFVAL
101: VAPSLLDDRS PYSEDQLCRL FEIFDRDGTG FIIAAELAHS MAKLGHALTA KELTGMIEEA DTDGDGRIDF REFSRAITAA AFDNVFS
101: VAPSLLDDRS PYSEDQLCRL FEIFDRDGTG FIIAAELAHS MAKLGHALTA KELTGMIEEA DTDGDGRIDF REFSRAITAA AFDNVFS
001: MSHKVSKKLD EEQINELREI FRSFDRNKDG SLTQLELGSL LRALGVKPSP DQFETLIDKA DTKSNGLVEF PEFVALVSPE LLSPAKRTTP YTEEQLLRLF
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG
101: RIFDTDGNGF ITAAELAHSM AKLGHALTVA ELTGMIKEAD SDGDGRINFQ EFAKAINSAA FDDIWG
Arabidopsis Description
CML17Probable calcium-binding protein CML17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQN4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.