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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G217900.1 Wheat cytosol 94.33 91.37
TraesCS3B01G246100.1 Wheat cytosol 94.33 91.37
Zm00001d053188_P001 Maize cytosol 39.68 89.91
TraesCS3A01G216300.1 Wheat cytosol 92.31 89.41
EES03239 Sorghum plastid 68.83 72.03
Zm00001d044411_P001 Maize plastid 68.02 71.79
GSMUA_Achr8P29750_001 Banana cytosol, mitochondrion 44.13 66.46
Os01t0604500-01 Rice cytosol 66.4 65.86
GSMUA_Achr9P21860_001 Banana cytosol, mitochondrion 42.91 65.03
GSMUA_Achr1P25220_001 Banana cytosol 42.51 64.42
CDY26151 Canola cytosol 39.68 62.42
Bra025896.1-P Field mustard cytosol 39.68 62.42
CDY19221 Canola cytosol 39.27 61.78
CDX81878 Canola cytosol 38.46 60.9
PGSC0003DMT400063261 Potato cytosol 39.68 60.87
PGSC0003DMT400041342 Potato cytosol, mitochondrion 39.68 60.87
VIT_17s0000g04460.t01 Wine grape cytosol 39.27 60.62
AT1G18530.1 Thale cress cytosol 38.46 60.51
CDY21702 Canola cytosol 38.06 60.26
Solyc01g010020.2.1 Tomato cytosol 39.27 60.25
KRH62961 Soybean cytosol 38.87 60.0
VIT_01s0011g02470.t01 Wine grape cytosol 39.27 59.88
KRH56721 Soybean cytosol 38.87 59.63
CDY59874 Canola cytosol 38.46 59.01
CDY04172 Canola cytosol 38.46 59.01
Bra017355.1-P Field mustard cytosol 38.46 59.01
CDY51605 Canola cytosol 38.46 58.64
CDY48076 Canola cytosol 38.46 58.64
Bra025149.1-P Field mustard cytosol 38.46 58.64
AT3G25600.1 Thale cress cytosol 37.65 57.76
KRH54782 Soybean cytosol 37.25 57.5
KRH07628 Soybean cytosol 37.25 57.5
Solyc03g114420.1.1 Tomato cytosol 39.27 56.73
PGSC0003DMT400019291 Potato cytosol 23.08 49.14
HORVU5Hr1G014070.2 Barley cytosol 25.51 37.95
HORVU1Hr1G080000.3 Barley cytosol 28.34 37.43
HORVU3Hr1G079210.4 Barley cytosol 27.13 36.41
HORVU5Hr1G044710.4 Barley cytosol 25.1 34.44
HORVU3Hr1G038010.1 Barley cytosol, plastid 26.72 33.17
HORVU2Hr1G016740.4 Barley cytosol 26.72 30.7
HORVU5Hr1G014060.1 Barley cytosol, plastid 26.32 30.37
HORVU2Hr1G030640.1 Barley cytosol 20.65 30.18
HORVU0Hr1G001280.1 Barley cytosol 17.81 29.14
HORVU7Hr1G113200.1 Barley cytosol 21.05 28.73
HORVU1Hr1G050720.2 Barley cytosol 28.34 26.82
HORVU4Hr1G026290.3 Barley cytosol, plastid 23.48 26.24
HORVU7Hr1G075240.1 Barley cytosol, plastid 17.0 21.54
Protein Annotations
EnsemblPlants:HORVU3Hr1G052770.1EnsemblPlantsGene:HORVU3Hr1G052770Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR44256PANTHER:PTHR44256:SF4
PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SEG:segSMART:SM00054SUPFAM:SSF47473
UniParc:UPI000B45FCD1UniProt:A0A287L297MapMan:35.1:::
Description
No Description!
Coordinates
chrchr3H:-:386434003..386435569
Molecular Weight (calculated)
26739.4 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.433
Length
247 amino acids
Sequence
(BLAST)
001: LKTRSRRKGW SDLVATPRNM QSHRPAPEDH VREESRSTRA QPTTRPHAAA TRTTATRARR SAFMSVPSDA GQETPPSATE GGRARLQDEQ LGQLRELFLR
101: FDLDGDGSLT KLEIAALLRS LGLRPAAGDE IHTLIASMDA DGNGTVEFDE LASSLSQLLL GPGRPAVAVD HEQLAEAFRA FDRDGNGYIS AAELARSMAQ
201: MGHPICYAEL TDMMREADTD GDGSISFEEF TAIMAKSAVE FLGLAAL
Best Arabidopsis Sequence Match ( AT1G18530.1 )
(BLAST)
001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS
Arabidopsis Description
CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.