Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400041342 | Potato | cytosol, mitochondrion | 77.78 | 78.26 |
| Solyc01g010020.2.1 | Tomato | cytosol | 77.16 | 77.64 |
| Bra017355.1-P | Field mustard | cytosol | 76.54 | 77.02 |
| CDY04172 | Canola | cytosol | 76.54 | 77.02 |
| KRH07628 | Soybean | cytosol | 75.93 | 76.88 |
| CDY59874 | Canola | cytosol | 75.93 | 76.4 |
| AT3G25600.1 | Thale cress | cytosol | 75.31 | 75.78 |
| Bra025149.1-P | Field mustard | cytosol | 75.31 | 75.31 |
| CDY48076 | Canola | cytosol | 75.31 | 75.31 |
| CDY51605 | Canola | cytosol | 75.31 | 75.31 |
| VIT_17s0000g04460.t01 | Wine grape | cytosol | 74.07 | 75.0 |
| PGSC0003DMT400019291 | Potato | cytosol | 50.0 | 69.83 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 69.75 | 69.33 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 68.52 | 68.1 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 65.43 | 64.63 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 66.05 | 61.85 |
| Zm00001d053188_P001 | Maize | cytosol | 41.36 | 61.47 |
| Zm00001d039110_P001 | Maize | cytosol | 64.81 | 61.05 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 62.96 | 59.3 |
| TraesCS1B01G446400.1 | Wheat | plastid | 62.96 | 58.29 |
| EES19997 | Sorghum | plastid | 63.58 | 55.38 |
| VIT_02s0012g02060.t01 | Wine grape | cytosol | 50.0 | 49.69 |
| VIT_16s0039g01880.t01 | Wine grape | cytosol | 49.38 | 49.08 |
| Zm00001d044411_P001 | Maize | plastid | 60.49 | 41.88 |
| EES03239 | Sorghum | plastid | 60.49 | 41.53 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 36.42 | 39.6 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 36.42 | 39.6 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 59.88 | 39.27 |
| Os01t0604500-01 | Rice | cytosol | 59.88 | 38.96 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 35.8 | 38.93 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 36.42 | 38.56 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 60.49 | 38.43 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 60.49 | 38.43 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 59.26 | 37.65 |
| VIT_17s0000g00580.t01 | Wine grape | cytosol | 33.95 | 36.91 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 33.33 | 35.29 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 27.16 | 26.67 |
| VIT_02s0241g00140.t01 | Wine grape | cytosol | 23.46 | 25.85 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 28.4 | 22.77 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100264548 | wikigene:100264548 | MapMan:35.1 | ProteinID:CBI27110 | ProteinID:CBI27110.3 |
| UniProt:D7T9D9 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:FN595752 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | EntrezGene:LOC100264548 | wikigene:LOC100264548 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR44256 | PANTHER:PTHR44256:SF6 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI00019829A3 | ArrayExpress:VIT_01s0011g02470 | EnsemblPlantsGene:VIT_01s0011g02470 | EnsemblPlants:VIT_01s0011g02470.t01 | RefSeq:XP_003631231 | RefSeq:XP_003631231.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:2251768..2252455
Molecular Weight (calculated)
17799.2 Da
IEP (calculated)
3.905
GRAVY (calculated)
-0.065
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMDTLKSDQ LTQLKDIFKR FDMDSDGSLT QLELAALLRS LGLKPTGDQL QVLLTNMDAN GNGSIEFDEL VEAILPDLNE QILVNQEQLT EVFRSFDRDG
101: NGYITASELA GSMAKMGSPL SYRELSDMMR EADINGDGVI SFNEFATIMA KSAADFLGLA VF
101: NGYITASELA GSMAKMGSPL SYRELSDMMR EADINGDGVI SFNEFATIMA KSAADFLGLA VF
001: MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
Arabidopsis Description
CML16Probable calcium-binding protein CML16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.