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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 5
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039110_P001 Maize cytosol 86.02 93.02
Os05t0577500-01 Rice cytosol, mitochondrion 80.11 86.13
TraesCS1A01G416100.1 Wheat cytosol 73.12 79.07
TraesCS1B01G446400.1 Wheat plastid 73.12 77.71
GSMUA_Achr8P29750_001 Banana cytosol, mitochondrion 65.05 73.78
GSMUA_Achr1P25220_001 Banana cytosol 61.83 70.55
GSMUA_Achr9P21860_001 Banana cytosol, mitochondrion 61.29 69.94
KRH56721 Soybean cytosol 56.45 65.22
KRH07628 Soybean cytosol 55.91 65.0
VIT_01s0011g02470.t01 Wine grape cytosol 55.38 63.58
PGSC0003DMT400063261 Potato cytosol 54.84 63.35
KRH62961 Soybean cytosol 54.3 63.12
VIT_17s0000g04460.t01 Wine grape cytosol 53.76 62.5
CDY59874 Canola cytosol 53.76 62.11
Bra017355.1-P Field mustard cytosol 53.76 62.11
CDY04172 Canola cytosol 53.76 62.11
Bra025896.1-P Field mustard cytosol 52.15 61.78
CDY26151 Canola cytosol 52.15 61.78
AT1G18530.1 Thale cress cytosol 52.15 61.78
Solyc03g114420.1.1 Tomato cytosol 56.45 61.4
Bra025149.1-P Field mustard cytosol 53.23 61.11
CDY51605 Canola cytosol 53.23 61.11
CDY48076 Canola cytosol 53.23 61.11
Solyc01g010020.2.1 Tomato cytosol 52.69 60.87
PGSC0003DMT400041342 Potato cytosol, mitochondrion 52.69 60.87
CDY19221 Canola cytosol 51.08 60.51
AT3G25600.1 Thale cress cytosol 52.15 60.25
CDX81878 Canola cytosol 50.0 59.62
CDY21702 Canola cytosol 50.0 59.62
KRH54782 Soybean cytosol 50.54 58.75
PGSC0003DMT400019291 Potato cytosol 33.87 54.31
EES03239 Sorghum plastid 64.52 50.85
EER90981 Sorghum cytosol 31.18 38.93
OQU84270 Sorghum cytosol, plastid 45.16 38.36
KXG37587 Sorghum cytosol 31.72 38.31
EES09201 Sorghum cytosol 35.48 36.67
EES16322 Sorghum cytosol 33.33 35.23
EES01631 Sorghum cytosol 33.87 34.24
OQU79799 Sorghum cytosol 22.58 28.38
OQU78227 Sorghum cytosol 25.81 26.82
KXG36700 Sorghum cytosol 24.19 26.16
KXG37588 Sorghum mitochondrion, nucleus 2.15 2.92
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:8083798UniProt:C5YW42EnsemblPlants:EES19997ProteinID:EES19997
ProteinID:EES19997.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:IPR002048PFAM:PF13499ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR44256
PANTHER:PTHR44256:SF6SMART:SM00054EnsemblPlantsGene:SORBI_3009G242700SUPFAM:SSF47473UniParc:UPI0001A8934ARefSeq:XP_002441567.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:-:57919723..57920642
Molecular Weight (calculated)
19826.7 Da
IEP (calculated)
4.585
GRAVY (calculated)
-0.095
Length
186 amino acids
Sequence
(BLAST)
001: MARSAPAAAA AASSPAPKPQ PQPQPHPHPQ LRGSQLKQLR EIFQRFDMDG DGSLTQLELA ALLRSLGLRP TGEEARALLA AMDSDGNGLV EFGELAAAIA
101: PLLTTQTHLV DQAQLLEVFR AFDRDGNGFI SAAELARSMA RLGQPLTFEE LTRMMRDADA DGDGVISFQE FAAVMAKSAL DFLGVA
Best Arabidopsis Sequence Match ( AT1G18530.1 )
(BLAST)
001: MEDQIRQLKD IFDRFDMDAD GSLTILELAA LLRSLGLKPS GDQIHVLLAS MDSNGNGFVE FDELVGTILP DLNEEVLINS EQLLEIFKSF DRDGNGFISA
101: AELAGAMAKM GQPLTYKELT EMIKEADTNG DGVISFGEFA SIMAKSAVDY FGLKINS
Arabidopsis Description
CML15Probable calcium-binding protein CML15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ75]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.