Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017355.1-P | Field mustard | cytosol | 98.14 | 98.14 |
| CDY04172 | Canola | cytosol | 98.14 | 98.14 |
| CDY51605 | Canola | cytosol | 95.65 | 95.06 |
| CDY48076 | Canola | cytosol | 95.03 | 94.44 |
| AT3G25600.1 | Thale cress | cytosol | 93.79 | 93.79 |
| KRH07628 | Soybean | cytosol | 76.4 | 76.88 |
| VIT_01s0011g02470.t01 | Wine grape | cytosol | 76.4 | 75.93 |
| CDY26151 | Canola | cytosol | 73.91 | 75.8 |
| CDY19221 | Canola | cytosol | 73.29 | 75.16 |
| Solyc01g010020.2.1 | Tomato | cytosol | 75.16 | 75.16 |
| PGSC0003DMT400041342 | Potato | cytosol, mitochondrion | 75.16 | 75.16 |
| CDX81878 | Canola | cytosol | 69.57 | 71.79 |
| CDY21702 | Canola | cytosol | 69.57 | 71.79 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 68.94 | 68.1 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 67.7 | 66.87 |
| PGSC0003DMT400019291 | Potato | cytosol | 47.83 | 66.38 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 65.84 | 64.63 |
| Zm00001d053188_P001 | Maize | cytosol | 41.61 | 61.47 |
| TraesCS1A01G416100.1 | Wheat | cytosol | 64.6 | 60.47 |
| TraesCS1B01G446400.1 | Wheat | plastid | 64.6 | 59.43 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 63.35 | 58.96 |
| Zm00001d039110_P001 | Maize | cytosol | 61.49 | 57.56 |
| EES19997 | Sorghum | plastid | 62.11 | 53.76 |
| CDY54677 | Canola | cytosol | 49.07 | 47.59 |
| CDY61824 | Canola | cytosol | 49.07 | 47.59 |
| CDY58544 | Canola | cytosol | 47.83 | 45.56 |
| EES03239 | Sorghum | plastid | 60.87 | 41.53 |
| Zm00001d044411_P001 | Maize | plastid | 60.25 | 41.45 |
| CDX92401 | Canola | cytosol | 33.54 | 40.3 |
| Os01t0604500-01 | Rice | cytosol | 60.87 | 39.36 |
| CDX99690 | Canola | cytosol | 36.02 | 38.93 |
| CDX96148 | Canola | cytosol | 36.02 | 38.93 |
| CDY65072 | Canola | cytosol | 36.02 | 38.93 |
| CDY55678 | Canola | cytosol | 36.02 | 38.93 |
| CDY56411 | Canola | cytosol | 36.02 | 38.93 |
| CDY04474 | Canola | cytosol | 36.02 | 38.93 |
| CDY12321 | Canola | cytosol | 34.78 | 38.62 |
| HORVU3Hr1G052770.1 | Barley | cytosol | 59.01 | 38.46 |
| CDY27651 | Canola | cytosol | 35.4 | 38.0 |
| TraesCS3B01G246100.1 | Wheat | cytosol | 59.01 | 37.25 |
| CDX92965 | Canola | cytosol | 35.4 | 37.01 |
| TraesCS3D01G217900.1 | Wheat | cytosol | 58.39 | 36.86 |
| CDY10686 | Canola | cytosol | 35.4 | 36.77 |
| CDY34215 | Canola | cytosol | 35.4 | 36.54 |
| TraesCS3A01G216300.1 | Wheat | cytosol | 57.76 | 36.47 |
| CDY06478 | Canola | cytosol | 33.54 | 35.76 |
| CDY10325 | Canola | cytosol | 24.22 | 34.51 |
| CDX94883 | Canola | cytosol | 23.6 | 34.23 |
| CDX75970 | Canola | cytosol | 22.98 | 32.46 |
| CDY48191 | Canola | cytosol | 36.02 | 32.4 |
| CDX77060 | Canola | cytosol | 36.02 | 32.22 |
| CDY40824 | Canola | cytosol | 35.4 | 31.67 |
| CDY57144 | Canola | cytosol | 26.09 | 28.77 |
| CDY30947 | Canola | cytosol | 36.65 | 28.23 |
| CDY21220 | Canola | cytosol | 36.02 | 26.24 |
| CDY15991 | Canola | cytosol | 23.6 | 25.68 |
| CDX98074 | Canola | cytosol | 23.6 | 25.68 |
| CDY31259 | Canola | cytosol | 23.6 | 25.68 |
| CDY30070 | Canola | cytosol | 23.6 | 25.68 |
| CDY26556 | Canola | cytosol | 23.6 | 25.68 |
| CDY21044 | Canola | cytosol | 23.6 | 25.68 |
| CDX75623 | Canola | extracellular | 27.95 | 25.0 |
| CDX83123 | Canola | golgi | 26.71 | 22.51 |
| CDY62753 | Canola | cytosol | 26.71 | 21.5 |
Protein Annotations
| EnsemblPlants:CDY59874 | EnsemblPlantsGene:GSBRNA2T00027812001 | Gene3D:1.10.238.10 | GO:A0A078J2C7 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR44256 |
| PANTHER:PTHR44256:SF6 | PFAM:PF13499 | PFscan:PS50222 | ProteinID:CDY59874 | ProteinID:CDY59874.1 | ScanProsite:PS00018 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EB958D | UniProt:A0A078J2C7 | MapMan:35.1 | : |
Description
BnaC09g52610DBnaC09g52610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2C7]
Coordinates
chrLK033814:-:44862..45484
Molecular Weight (calculated)
17542.9 Da
IEP (calculated)
4.038
GRAVY (calculated)
-0.094
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAKPTDQI KQLKDIFTRF DMDGDGSLTQ LELAALLRSL GIKPRGDQIT LLLNQIDCNG NGSVEFDELV VAILPDLNEE VLINQEQLME VFRSFDRDGN
101: GQITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FDEFAHIMAK SAADFLGLTA A
101: GQITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FDEFAHIMAK SAADFLGLTA A
001: MASTKPTDQI KQLKDIFARF DMDKDGSLTQ LELAALLRSL GIKPRGDQIS LLLNQIDRNG NGSVEFDELV VAILPDINEE VLINQEQLME VFRSFDRDGN
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
101: GSITAAELAG SMAKMGHPLT YRELTEMMTE ADSNGDGVIS FNEFSHIMAK SAADFLGLTA S
Arabidopsis Description
CML16Probable calcium-binding protein CML16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.