CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046278	Potato	cytosol	59.65	88.31
PGSC0003DMT400054299	Potato	cytosol	77.19	77.88
Zm00001d008278_P001	Maize	cytosol	80.7	72.44
TraesCS1A01G308800.1	Wheat	cytosol	80.7	70.23
PGSC0003DMT400014123	Potato	mitochondrion	73.68	68.85
KRH18664	Soybean	cytosol	80.7	65.71
CDX96148	Canola	cytosol	84.21	64.43
CDX99690	Canola	cytosol	84.21	64.43
CDY27651	Canola	cytosol	84.21	64.0
CDY55678	Canola	cytosol	83.33	63.76
Zm00001d047597_P001	Maize	cytosol	80.7	62.59
GSMUA_Achr2P01120_001	Banana	cytosol	81.58	62.42
GSMUA_Achr3P25040_001	Banana	cytosol	81.58	62.42
Os05t0491100-01	Rice	cytosol, extracellular	81.58	62.42
CDY04474	Canola	cytosol	80.7	61.74
CDY56411	Canola	cytosol	80.7	61.74
GSMUA_Achr10P...	Banana	cytosol	80.7	61.74
GSMUA_Achr10P...	Banana	cytosol, plasma membrane	80.7	61.74
GSMUA_Achr3P09330_001	Banana	cytosol	80.7	61.74
GSMUA_Achr5P07820_001	Banana	cytosol	80.7	61.74
GSMUA_Achr6P23670_001	Banana	cytosol	80.7	61.74
KRG94975	Soybean	nucleus	80.7	61.74
Os01t0267900-01	Rice	cytosol	80.7	61.74
Os01t0279300-01	Rice	cytosol, plasma membrane, plastid	80.7	61.74
Os03t0319300-01	Rice	cytosol, extracellular, nucleus	80.7	61.74
Os07t0687200-02	Rice	cytosol	80.7	61.74
Solyc10g081170.1.1	Tomato	extracellular	80.7	61.74
VIT_08s0040g00470.t01	Wine grape	cytosol	80.7	61.74
Zm00001d038545_P001	Maize	cytosol, mitochondrion	80.7	61.74
GSMUA_Achr6P15990_001	Banana	cytosol	79.82	61.07
GSMUA_Achr9P17280_001	Banana	cytosol	79.82	61.07
PGSC0003DMT400018569	Potato	cytosol	79.82	61.07
PGSC0003DMT400058435	Potato	cytosol	79.82	61.07
PGSC0003DMT400070437	Potato	cytosol	79.82	61.07
Solyc01g008950.2.1	Tomato	nucleus	79.82	61.07
Solyc10g077010.1.1	Tomato	cytosol	79.82	61.07
Solyc11g072240.1.1	Tomato	cytosol	79.82	61.07
Solyc12g099990.1.1	Tomato	nucleus	79.82	61.07
CDY65072	Canola	cytosol	78.95	60.4
VIT_06s0009g01910.t01	Wine grape	cytosol	80.7	60.13
CDY12321	Canola	cytosol	73.68	57.93
TraesCS3A01G191900.1	Wheat	cytosol	80.7	57.86
TraesCS3D01G194500.2	Wheat	cytosol	80.7	57.86
CDX92401	Canola	cytosol	66.67	56.72
TraesCS3A01G184500.1	Wheat	cytosol	79.82	55.49
TraesCS3D01G188600.1	Wheat	cytosol	80.7	55.09
Zm00001d038543_P004	Maize	plastid	81.58	55.03
AT5G37780.3	Thale cress	cytosol	83.33	54.29
TraesCS3B01G219900.1	Wheat	cytosol	80.7	52.87
TraesCS2B01G113800.2	Wheat	cytosol	80.7	52.57
CDY57144	Canola	cytosol	66.67	52.05
PGSC0003DMT400097662	Potato	cytosol, mitochondrion	78.95	52.02
GSMUA_Achr5P27590_001	Banana	cytosol	52.63	51.72
CDY48191	Canola	cytosol	80.7	51.4
CDX77060	Canola	cytosol	80.7	51.11
TraesCS3A01G335000.1	Wheat	cytosol	78.95	49.45
TraesCS3D01G328300.1	Wheat	cytosol	78.95	49.45
HORVU3Hr1G079210.4	Barley	cytosol	78.95	48.91
CDX92965	Canola	cytosol	65.79	48.7
KRG89812	Soybean	cytosol, mitochondrion	70.18	48.48
TraesCS3B01G365900.1	Wheat	cytosol	77.19	48.09
CDY34215	Canola	cytosol	65.79	48.08
Zm00001d028948_P001	Maize	cytosol	81.58	47.21
CDY10686	Canola	cytosol	64.04	47.1
HORVU3Hr1G038010.1	Barley	cytosol, plastid	80.7	46.23
GSMUA_Achr11P...	Banana	cytosol	41.23	46.08
CDY06478	Canola	cytosol	60.53	45.7
CDY30947	Canola	cytosol	79.82	43.54
HORVU2Hr1G016740.4	Barley	cytosol	80.7	42.79
EES01631	Sorghum	cytosol	67.54	41.85
Zm00001d052415_P001	Maize	cytosol	57.89	41.77
Os01t0810300-01	Rice	plasma membrane	68.42	41.71
CDY40824	Canola	cytosol	65.79	41.67
Zm00001d041430_P001	Maize	cytosol	61.4	41.42
CDY21220	Canola	cytosol	79.82	41.18
Os12t0603800-00	Rice	cytosol	59.65	40.96
EES16322	Sorghum	cytosol	63.16	40.91
TraesCS5A01G057200.1	Wheat	cytosol	57.89	40.49
Zm00001d043144_P001	Maize	plasma membrane	64.91	40.44
GSMUA_Achr10P...	Banana	cytosol	66.67	40.21
TraesCS5D01G068100.1	Wheat	cytosol	57.02	39.88
HORVU5Hr1G014070.2	Barley	cytosol	57.89	39.76
CDX94883	Canola	cytosol	38.6	39.64
CDY10325	Canola	cytosol	38.6	38.94
GSMUA_Achr10P...	Banana	cytosol	64.04	38.83
TraesCS5A01G057100.1	Wheat	cytosol	56.14	38.79
TraesCS5D01G068000.1	Wheat	cytosol	56.14	38.1
TraesCS5B01G059900.1	Wheat	cytosol	55.26	37.5
HORVU5Hr1G044710.4	Barley	cytosol	58.77	37.22
TraesCS5A01G139700.1	Wheat	cytosol	58.77	37.22
TraesCS5D01G153400.1	Wheat	cytosol	58.77	37.22
EES09201	Sorghum	cytosol	57.89	36.67
TraesCS5B01G137100.1	Wheat	cytosol	57.89	36.67
Zm00001d005003_P002	Maize	cytosol	54.39	34.44
HORVU4Hr1G026290.3	Barley	cytosol, plastid	58.77	30.32
HORVU5Hr1G014060.1	Barley	cytosol, plastid	55.26	29.44
Zm00001d010649_P001	Maize	extracellular	34.21	27.46
CDY21044	Canola	cytosol	35.09	27.03
Os05t0491000-01	Rice	cytosol	35.96	26.45
TraesCS4B01G131100.1	Wheat	cytosol	53.51	26.41
CDX98074	Canola	cytosol	34.21	26.35
CDY15991	Canola	cytosol	34.21	26.35
CDY26556	Canola	cytosol	34.21	26.35
CDY30070	Canola	cytosol	34.21	26.35
CDY31259	Canola	cytosol	34.21	26.35
TraesCS4D01G126100.1	Wheat	cytosol	55.26	26.14
CDY58544	Canola	cytosol	37.72	25.44
TraesCS1B01G319300.1	Wheat	cytosol	32.46	24.67
HORVU0Hr1G001280.1	Barley	cytosol	32.46	24.5
TraesCS1A01G308700.1	Wheat	cytosol	32.46	24.34
TraesCS1D01G308000.1	Wheat	cytosol	31.58	24.0
CDX75623	Canola	extracellular	37.72	23.89
CDX81878	Canola	cytosol	32.46	23.72
CDY21702	Canola	cytosol	32.46	23.72
CDY19221	Canola	cytosol	32.46	23.57
CDY26151	Canola	cytosol	32.46	23.57
CDX83123	Canola	golgi	39.47	23.56
CDY54677	Canola	cytosol	34.21	23.49
CDY61824	Canola	cytosol	34.21	23.49
CDY04172	Canola	cytosol	32.46	22.98
CDY59874	Canola	cytosol	32.46	22.98
CDY48076	Canola	cytosol	32.46	22.84
CDY51605	Canola	cytosol	32.46	22.84
CDY62753	Canola	cytosol	39.47	22.5
OQU78227	Sorghum	cytosol	35.09	22.35
GSMUA_Achr8P05790_001	Banana	cytosol	24.56	11.43

Protein Annotations

EnsemblPlants:CDX75970	EnsemblPlantsGene:GSBRNA2T00124005001	Gene3D:1.10.238.10	GO:A0A078CGJ0	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050
PANTHER:PTHR23050:SF250	PFAM:PF00036	PFAM:PF13499	PFscan:PS50222	ProteinID:CDX75970	ProteinID:CDX75970.1
ScanProsite:PS00018	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0004EEC53B	MapMan:35.1	:

Description

BnaC03g40530D

Coordinates

chrLK031805:+:2329987..2330331

Molecular Weight (calculated)

13023.3 Da

IEP (calculated)

4.117

GRAVY (calculated)

-0.580

Length

114 amino acids

Sequence
(BLAST)

001: MINGYLCHSH YSELQDMINE VDADGNGTID FSDFLNLMAK KMKDTDSKEE LKEAFRVFDK DQNGFISAAE LCHVMTNLGE KLTDEEVEEI VREADVDGDG
101: QKNYEEFVKI MMAK

Best Arabidopsis Sequence Match ( AT1G66410.1 )
(BLAST)

001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK

Arabidopsis Description

CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.