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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034981.1-P Field mustard cytosol 100.0 100.0
GSMUA_Achr5P27590_001 Banana cytosol 78.62 98.28
CDX92401 Canola cytosol 88.28 95.52
PGSC0003DMT400018569 Potato cytosol 97.93 95.3
PGSC0003DMT400070437 Potato cytosol 97.93 95.3
Solyc10g077010.1.1 Tomato cytosol 97.93 95.3
Solyc11g072240.1.1 Tomato cytosol 97.93 95.3
Solyc12g099990.1.1 Tomato nucleus 97.93 95.3
GSMUA_Achr11P... Banana cytosol 66.9 95.1
CDY04474 Canola cytosol 97.24 94.63
CDY56411 Canola cytosol 97.24 94.63
CDY65072 Canola cytosol 97.24 94.63
PGSC0003DMT400058435 Potato cytosol 97.24 94.63
Solyc01g008950.2.1 Tomato nucleus 97.24 94.63
Solyc10g081170.1.1 Tomato extracellular 97.24 94.63
VIT_08s0040g00470.t01 Wine grape cytosol 97.24 94.63
GSMUA_Achr10P... Banana cytosol 96.55 93.96
GSMUA_Achr6P15990_001 Banana cytosol 96.55 93.96
GSMUA_Achr9P17280_001 Banana cytosol 96.55 93.96
Os01t0267900-01 Rice cytosol 96.55 93.96
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 96.55 93.96
Os03t0319300-01 Rice cytosol, extracellular, nucleus 96.55 93.96
Os07t0687200-02 Rice cytosol 96.55 93.96
GSMUA_Achr10P... Banana cytosol, plasma membrane 95.86 93.29
GSMUA_Achr3P09330_001 Banana cytosol 95.86 93.29
GSMUA_Achr5P07820_001 Banana cytosol 95.86 93.29
GSMUA_Achr6P23670_001 Banana cytosol 95.86 93.29
KRG94975 Soybean nucleus 95.86 93.29
GSMUA_Achr2P01120_001 Banana cytosol 95.17 92.62
GSMUA_Achr3P25040_001 Banana cytosol 95.17 92.62
Os05t0491100-01 Rice cytosol, extracellular 95.17 92.62
VIT_06s0009g01910.t01 Wine grape cytosol 97.24 92.16
CDY55678 Canola cytosol 94.48 91.95
Zm00001d008278_P001 Maize cytosol 80.0 91.34
CDX96148 Canola cytosol 93.79 91.28
PGSC0003DMT400054299 Potato cytosol 71.03 91.15
PGSC0003DMT400046278 Potato cytosol 48.28 90.91
TraesCS1A01G308800.1 Wheat cytosol 81.38 90.08
CDY27651 Canola cytosol 93.1 90.0
CDX99690 Canola cytosol 92.41 89.93
TraesCS3A01G184500.1 Wheat cytosol 95.86 84.76
KRH18664 Soybean cytosol 81.38 84.29
TraesCS3D01G188600.1 Wheat cytosol 96.55 83.83
Zm00001d038545_P001 Maize cytosol, mitochondrion 83.45 81.21
Zm00001d047597_P001 Maize cytosol 81.38 80.27
TraesCS2B01G113800.2 Wheat cytosol 96.55 80.0
TraesCS3B01G219900.1 Wheat cytosol 95.86 79.89
PGSC0003DMT400014123 Potato mitochondrion 66.9 79.51
CDY48191 Canola cytosol 97.24 78.77
CDX77060 Canola cytosol 97.24 78.33
TraesCS3A01G191900.1 Wheat cytosol 81.38 74.21
TraesCS3D01G194500.2 Wheat cytosol 81.38 74.21
CDX75970 Canola cytosol 57.93 73.68
KRG89812 Soybean cytosol, mitochondrion 83.45 73.33
TraesCS3A01G335000.1 Wheat cytosol 91.03 72.53
TraesCS3D01G328300.1 Wheat cytosol 91.03 72.53
HORVU3Hr1G079210.4 Barley cytosol 91.03 71.74
Zm00001d038543_P004 Maize plastid 83.45 71.6
TraesCS3B01G365900.1 Wheat cytosol 89.66 71.04
HORVU3Hr1G038010.1 Barley cytosol, plastid 96.55 70.35
PGSC0003DMT400097662 Potato cytosol, mitochondrion 83.45 69.94
CDX92965 Canola cytosol 72.41 68.18
CDY34215 Canola cytosol 73.1 67.95
CDY10686 Canola cytosol 72.41 67.74
CDX94883 Canola cytosol 51.72 67.57
CDY30947 Canola cytosol 96.55 66.99
EES01631 Sorghum cytosol 84.14 66.3
AT3G43810.2 Thale cress cytosol 96.55 65.42
HORVU2Hr1G016740.4 Barley cytosol 96.55 65.12
CDY10325 Canola cytosol 50.34 64.6
Zm00001d043144_P001 Maize plasma membrane 81.38 64.48
CDY06478 Canola cytosol 66.9 64.24
Os01t0810300-01 Rice plasma membrane 81.38 63.1
CDY21220 Canola cytosol 95.86 62.9
Zm00001d028948_P001 Maize cytosol 84.83 62.44
CDY57144 Canola cytosol 62.07 61.64
GSMUA_Achr10P... Banana cytosol 76.55 59.04
TraesCS5D01G068100.1 Wheat cytosol 66.21 58.9
CDY40824 Canola cytosol 73.1 58.89
GSMUA_Achr10P... Banana cytosol 76.55 58.73
EES09201 Sorghum cytosol 72.41 58.33
TraesCS5A01G057100.1 Wheat cytosol 66.21 58.18
Zm00001d041430_P001 Maize cytosol 67.59 57.99
TraesCS5B01G137100.1 Wheat cytosol 71.72 57.78
TraesCS5A01G057200.1 Wheat cytosol 64.83 57.67
EES16322 Sorghum cytosol 69.66 57.39
HORVU5Hr1G044710.4 Barley cytosol 71.03 57.22
TraesCS5A01G139700.1 Wheat cytosol 71.03 57.22
TraesCS5D01G153400.1 Wheat cytosol 71.03 57.22
TraesCS5D01G068000.1 Wheat cytosol 66.21 57.14
HORVU5Hr1G014070.2 Barley cytosol 64.83 56.63
Os12t0603800-00 Rice cytosol 64.83 56.63
TraesCS5B01G059900.1 Wheat cytosol 65.52 56.55
Zm00001d005003_P002 Maize cytosol 69.66 56.11
Zm00001d052415_P001 Maize cytosol 60.69 55.7
CDX98074 Canola cytosol 46.9 45.95
CDY21044 Canola cytosol 46.9 45.95
CDY30070 Canola cytosol 46.9 45.95
CDY31259 Canola cytosol 46.9 45.95
CDY26556 Canola cytosol 46.21 45.27
Os05t0491000-01 Rice cytosol 48.28 45.16
TraesCS1D01G308000.1 Wheat cytosol 46.21 44.67
CDY15991 Canola cytosol 45.52 44.59
HORVU5Hr1G014060.1 Barley cytosol, plastid 65.52 44.39
HORVU0Hr1G001280.1 Barley cytosol 46.21 44.37
TraesCS1A01G308700.1 Wheat cytosol 46.21 44.08
TraesCS1B01G319300.1 Wheat cytosol 45.52 44.0
Zm00001d010649_P001 Maize extracellular 40.69 41.55
TraesCS4B01G131100.1 Wheat cytosol 65.52 41.13
TraesCS4D01G126100.1 Wheat cytosol 66.21 39.83
HORVU4Hr1G026290.3 Barley cytosol, plastid 60.69 39.82
OQU78227 Sorghum cytosol 48.28 39.11
CDY54677 Canola cytosol 44.14 38.55
CDY61824 Canola cytosol 44.14 38.55
CDY58544 Canola cytosol 44.83 38.46
CDY26151 Canola cytosol 37.93 35.03
CDX75623 Canola extracellular 43.45 35.0
CDY59874 Canola cytosol 38.62 34.78
CDX81878 Canola cytosol 37.24 34.62
CDY21702 Canola cytosol 37.24 34.62
CDY19221 Canola cytosol 37.24 34.39
CDY04172 Canola cytosol 37.93 34.16
CDY48076 Canola cytosol 37.93 33.95
CDY51605 Canola cytosol 37.93 33.95
CDX83123 Canola golgi 44.14 33.51
CDY62753 Canola cytosol 44.83 32.5
GSMUA_Achr8P05790_001 Banana cytosol 47.59 28.16
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1GO:A0A078FGE9UniProt:A0A078FGE9EnsemblPlants:CDY12321ProteinID:CDY12321
ProteinID:CDY12321.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509EnsemblPlantsGene:GSBRNA2T00061425001InterPro:IPR002048PFAM:PF13499PFAM:PF13833ScanProsite:PS00018
PFscan:PS50222PANTHER:PTHR23050PANTHER:PTHR23050:SF250SMART:SM00054SUPFAM:SSF47473UniParc:UPI000253E5B8
Description
BnaA06g20230DBnaA06g20230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGE9]
Coordinates
chrLK032020:+:62467..63673
Molecular Weight (calculated)
16404.2 Da
IEP (calculated)
3.960
GRAVY (calculated)
-0.659
Length
145 amino acids
Sequence
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RDQNGFISAA
101: ELRHVMTNLG KKLTDEEMDE MIREADVDGD GRINYDEFVK VMMAK
Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.