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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • vacuole 1
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55678 Canola cytosol 99.33 99.33
CDY27651 Canola cytosol 99.33 98.67
CDX99690 Canola cytosol 98.66 98.66
GSMUA_Achr3P25040_001 Banana cytosol 97.32 97.32
Os05t0491100-01 Rice cytosol, extracellular 97.32 97.32
CDY04474 Canola cytosol 96.64 96.64
CDY56411 Canola cytosol 96.64 96.64
GSMUA_Achr6P23670_001 Banana cytosol 96.64 96.64
KRG94975 Soybean nucleus 96.64 96.64
Solyc10g081170.1.1 Tomato extracellular 96.64 96.64
VIT_08s0040g00470.t01 Wine grape cytosol 96.64 96.64
GSMUA_Achr10P... Banana cytosol 95.97 95.97
GSMUA_Achr2P01120_001 Banana cytosol 95.97 95.97
GSMUA_Achr6P15990_001 Banana cytosol 95.97 95.97
Os01t0267900-01 Rice cytosol 95.97 95.97
Os01t0279300-01 Rice cytosol, plasma membrane, plastid 95.97 95.97
Os03t0319300-01 Rice cytosol, extracellular, nucleus 95.97 95.97
Os07t0687200-02 Rice cytosol 95.97 95.97
PGSC0003DMT400018569 Potato cytosol 95.97 95.97
PGSC0003DMT400070437 Potato cytosol 95.97 95.97
Solyc10g077010.1.1 Tomato cytosol 95.97 95.97
Solyc11g072240.1.1 Tomato cytosol 95.97 95.97
Solyc12g099990.1.1 Tomato nucleus 95.97 95.97
CDY65072 Canola cytosol 95.3 95.3
GSMUA_Achr10P... Banana cytosol, plasma membrane 95.3 95.3
GSMUA_Achr3P09330_001 Banana cytosol 95.3 95.3
GSMUA_Achr5P07820_001 Banana cytosol 95.3 95.3
PGSC0003DMT400058435 Potato cytosol 95.3 95.3
Solyc01g008950.2.1 Tomato nucleus 95.3 95.3
GSMUA_Achr11P... Banana cytosol 65.1 95.1
GSMUA_Achr5P27590_001 Banana cytosol 73.83 94.83
CDX92401 Canola cytosol 85.23 94.78
GSMUA_Achr9P17280_001 Banana cytosol 94.63 94.63
Zm00001d008278_P001 Maize cytosol 80.54 94.49
VIT_06s0009g01910.t01 Wine grape cytosol 96.64 94.12
CDY12321 Canola cytosol 91.28 93.79
PGSC0003DMT400046278 Potato cytosol 48.32 93.51
TraesCS1A01G308800.1 Wheat cytosol 81.88 93.13
AT1G66410.2 Thale cress cytosol 99.33 93.08
PGSC0003DMT400054299 Potato cytosol 70.47 92.92
KRH18664 Soybean cytosol 81.88 87.14
TraesCS3A01G184500.1 Wheat cytosol 95.3 86.59
TraesCS3D01G188600.1 Wheat cytosol 95.97 85.63
CDX75970 Canola cytosol 64.43 84.21
Zm00001d038545_P001 Maize cytosol, mitochondrion 83.89 83.89
Zm00001d047597_P001 Maize cytosol 81.88 82.99
PGSC0003DMT400014123 Potato mitochondrion 67.79 82.79
TraesCS2B01G113800.2 Wheat cytosol 95.97 81.71
TraesCS3B01G219900.1 Wheat cytosol 95.3 81.61
CDY48191 Canola cytosol 96.64 80.45
CDX77060 Canola cytosol 96.64 80.0
TraesCS3A01G191900.1 Wheat cytosol 81.88 76.73
TraesCS3D01G194500.2 Wheat cytosol 81.88 76.73
TraesCS3A01G335000.1 Wheat cytosol 93.29 76.37
TraesCS3D01G328300.1 Wheat cytosol 93.29 76.37
HORVU3Hr1G079210.4 Barley cytosol 93.29 75.54
TraesCS3B01G365900.1 Wheat cytosol 91.95 74.86
Zm00001d038543_P004 Maize plastid 83.89 73.96
KRG89812 Soybean cytosol, mitochondrion 80.54 72.73
HORVU3Hr1G038010.1 Barley cytosol, plastid 95.97 71.86
CDY34215 Canola cytosol 75.17 71.79
PGSC0003DMT400097662 Potato cytosol, mitochondrion 83.22 71.68
CDX92965 Canola cytosol 73.83 71.43
CDX94883 Canola cytosol 53.02 71.17
CDY10686 Canola cytosol 73.83 70.97
CDY10325 Canola cytosol 53.02 69.91
CDY30947 Canola cytosol 95.97 68.42
EES01631 Sorghum cytosol 83.22 67.39
Zm00001d043144_P001 Maize plasma membrane 82.55 67.21
CDY06478 Canola cytosol 67.79 66.89
Os01t0810300-01 Rice plasma membrane 83.89 66.84
HORVU2Hr1G016740.4 Barley cytosol 95.97 66.51
Zm00001d028948_P001 Maize cytosol 85.23 64.47
CDY57144 Canola cytosol 63.09 64.38
CDY21220 Canola cytosol 95.3 64.25
GSMUA_Achr10P... Banana cytosol 78.52 62.23
CDY40824 Canola cytosol 75.17 62.22
TraesCS5D01G068100.1 Wheat cytosol 67.79 61.96
GSMUA_Achr10P... Banana cytosol 78.52 61.9
Zm00001d041430_P001 Maize cytosol 69.8 61.54
EES16322 Sorghum cytosol 71.81 60.8
TraesCS5A01G057200.1 Wheat cytosol 66.44 60.74
TraesCS5B01G137100.1 Wheat cytosol 73.15 60.56
Os12t0603800-00 Rice cytosol 67.11 60.24
EES09201 Sorghum cytosol 72.48 60.0
HORVU5Hr1G044710.4 Barley cytosol 72.48 60.0
TraesCS5A01G057100.1 Wheat cytosol 66.44 60.0
TraesCS5A01G139700.1 Wheat cytosol 72.48 60.0
TraesCS5D01G153400.1 Wheat cytosol 72.48 60.0
HORVU5Hr1G014070.2 Barley cytosol 66.44 59.64
TraesCS5D01G068000.1 Wheat cytosol 66.44 58.93
TraesCS5B01G059900.1 Wheat cytosol 65.77 58.33
Zm00001d005003_P002 Maize cytosol 69.8 57.78
Zm00001d052415_P001 Maize cytosol 61.07 57.59
CDX98074 Canola cytosol 47.65 47.97
CDY21044 Canola cytosol 47.65 47.97
CDY30070 Canola cytosol 47.65 47.97
CDY31259 Canola cytosol 47.65 47.97
CDY15991 Canola cytosol 46.98 47.3
CDY26556 Canola cytosol 46.98 47.3
Os05t0491000-01 Rice cytosol 47.65 45.81
HORVU5Hr1G014060.1 Barley cytosol, plastid 65.77 45.79
HORVU0Hr1G001280.1 Barley cytosol 44.97 44.37
TraesCS1A01G308700.1 Wheat cytosol 44.97 44.08
TraesCS1B01G319300.1 Wheat cytosol 44.3 44.0
TraesCS1D01G308000.1 Wheat cytosol 43.62 43.33
TraesCS4B01G131100.1 Wheat cytosol 66.44 42.86
TraesCS4D01G126100.1 Wheat cytosol 67.79 41.91
HORVU4Hr1G026290.3 Barley cytosol, plastid 61.07 41.18
Zm00001d010649_P001 Maize extracellular 38.93 40.85
CDY58544 Canola cytosol 44.97 39.65
CDY54677 Canola cytosol 43.62 39.16
CDY61824 Canola cytosol 43.62 39.16
OQU78227 Sorghum cytosol 46.31 38.55
CDY26151 Canola cytosol 38.93 36.94
CDX75623 Canola extracellular 44.3 36.67
CDX81878 Canola cytosol 38.26 36.54
CDY21702 Canola cytosol 38.26 36.54
CDY19221 Canola cytosol 38.26 36.31
CDY04172 Canola cytosol 38.93 36.02
CDY59874 Canola cytosol 38.93 36.02
CDY48076 Canola cytosol 38.93 35.8
CDY51605 Canola cytosol 38.93 35.8
CDX83123 Canola golgi 45.64 35.6
CDY62753 Canola cytosol 46.31 34.5
GSMUA_Achr8P05790_001 Banana cytosol 46.31 28.16
Protein Annotations
EnsemblPlants:CDX96148EnsemblPlantsGene:GSBRNA2T00102206001Gene3D:1.10.238.10GO:A0A078E9U7GO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050
PANTHER:PTHR23050:SF250PFAM:PF13499PFscan:PS50222ProteinID:CDX96148ProteinID:CDX96148.1ScanProsite:PS00018
SMART:SM00054SUPFAM:SSF47473UniParc:UPI000151E3C8MapMan:35.1::
Description
BnaA07g25830D
Coordinates
chrLK031892:+:1317543..1318760
Molecular Weight (calculated)
16848.6 Da
IEP (calculated)
3.887
GRAVY (calculated)
-0.615
Length
149 amino acids
Sequence
(BLAST)
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMVREAD VDGDGQINYE EFVKIMMAK
Best Arabidopsis Sequence Match ( AT5G37780.1 )
(BLAST)
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM1Calmodulin 1 [Source:UniProtKB/TrEMBL;Acc:F4K8M2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.