Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_08s0040g00470.t01 | Wine grape | cytosol | 97.39 | 100.0 |
AT3G56800.1 | Thale cress | cytosol | 96.73 | 99.33 |
AT5G21274.1 | Thale cress | cytosol | 96.73 | 99.33 |
Bra000214.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Bra002368.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Bra003251.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Bra006595.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Bra014671.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Bra020155.1-P | Field mustard | cytosol | 96.73 | 99.33 |
Os01t0267900-01 | Rice | cytosol | 96.73 | 99.33 |
Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 96.73 | 99.33 |
Os07t0687200-02 | Rice | cytosol | 96.73 | 99.33 |
PGSC0003DMT400070437 | Potato | cytosol | 96.73 | 99.33 |
Solyc11g072240.1.1 | Tomato | cytosol | 96.73 | 99.33 |
Solyc12g099990.1.1 | Tomato | nucleus | 96.73 | 99.33 |
PGSC0003DMT400046278 | Potato | cytosol | 49.67 | 98.7 |
Bra007269.1-P | Field mustard | cytosol | 96.08 | 98.66 |
Bra012037.1-P | Field mustard | cytosol | 96.08 | 98.66 |
Bra019453.1-P | Field mustard | cytosol | 96.08 | 98.66 |
CDY04474 | Canola | cytosol | 96.08 | 98.66 |
CDY56411 | Canola | cytosol | 96.08 | 98.66 |
CDY65072 | Canola | cytosol | 96.08 | 98.66 |
GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 96.08 | 98.66 |
GSMUA_Achr3P09330_001 | Banana | cytosol | 96.08 | 98.66 |
GSMUA_Achr5P07820_001 | Banana | cytosol | 96.08 | 98.66 |
GSMUA_Achr6P23670_001 | Banana | cytosol | 96.08 | 98.66 |
PGSC0003DMT400058435 | Potato | cytosol | 96.08 | 98.66 |
Solyc01g008950.2.1 | Tomato | nucleus | 96.08 | 98.66 |
CDX92401 | Canola | cytosol | 86.27 | 98.51 |
GSMUA_Achr5P27590_001 | Banana | cytosol | 74.51 | 98.28 |
GSMUA_Achr10P... | Banana | cytosol | 95.42 | 97.99 |
GSMUA_Achr2P01120_001 | Banana | cytosol | 95.42 | 97.99 |
GSMUA_Achr3P25040_001 | Banana | cytosol | 95.42 | 97.99 |
GSMUA_Achr6P15990_001 | Banana | cytosol | 95.42 | 97.99 |
GSMUA_Achr9P17280_001 | Banana | cytosol | 95.42 | 97.99 |
Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 95.42 | 97.99 |
Os05t0491100-01 | Rice | cytosol, extracellular | 95.42 | 97.99 |
Zm00001d008278_P001 | Maize | cytosol | 81.05 | 97.64 |
CDY55678 | Canola | cytosol | 94.77 | 97.32 |
Bra034981.1-P | Field mustard | cytosol | 92.16 | 97.24 |
CDY12321 | Canola | cytosol | 92.16 | 97.24 |
GSMUA_Achr11P... | Banana | cytosol | 64.71 | 97.06 |
Bra004166.1-P | Field mustard | cytosol | 94.12 | 96.64 |
CDX96148 | Canola | cytosol | 94.12 | 96.64 |
Bra025438.1-P | Field mustard | cytosol | 71.24 | 96.46 |
PGSC0003DMT400054299 | Potato | cytosol | 71.24 | 96.46 |
TraesCS1A01G308800.1 | Wheat | cytosol | 82.35 | 96.18 |
CDY27651 | Canola | cytosol | 93.46 | 95.33 |
CDX99690 | Canola | cytosol | 92.81 | 95.3 |
VIT_17s0000g00580.t01 | Wine grape | cytosol | 90.85 | 93.29 |
AT2G41110.2 | Thale cress | cytosol | 96.73 | 91.93 |
AT1G66410.2 | Thale cress | cytosol | 94.77 | 91.19 |
KRH18664 | Soybean | cytosol | 82.35 | 90.0 |
TraesCS3A01G184500.1 | Wheat | cytosol | 96.08 | 89.63 |
TraesCS3D01G188600.1 | Wheat | cytosol | 96.73 | 88.62 |
Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 84.31 | 86.58 |
Zm00001d047597_P001 | Maize | cytosol | 82.35 | 85.71 |
PGSC0003DMT400014123 | Potato | mitochondrion | 67.97 | 85.25 |
TraesCS2B01G113800.2 | Wheat | cytosol | 96.73 | 84.57 |
CDX77060 | Canola | cytosol | 98.69 | 83.89 |
Bra034317.1-P | Field mustard | cytosol | 98.04 | 83.8 |
CDY48191 | Canola | cytosol | 98.04 | 83.8 |
TraesCS3B01G219900.1 | Wheat | cytosol | 94.77 | 83.33 |
AT2G27030.3 | Thale cress | cytosol | 98.04 | 82.87 |
AT5G37780.3 | Thale cress | cytosol | 94.77 | 82.86 |
CDX75970 | Canola | cytosol | 60.13 | 80.7 |
VIT_05s0020g04420.t01 | Wine grape | cytosol | 76.47 | 78.52 |
TraesCS3A01G191900.1 | Wheat | cytosol | 81.05 | 77.99 |
TraesCS3D01G194500.2 | Wheat | cytosol | 81.05 | 77.99 |
TraesCS3A01G335000.1 | Wheat | cytosol | 90.85 | 76.37 |
TraesCS3D01G328300.1 | Wheat | cytosol | 90.85 | 76.37 |
Zm00001d038543_P004 | Maize | plastid | 84.31 | 76.33 |
KRG89812 | Soybean | cytosol, mitochondrion | 81.7 | 75.76 |
HORVU3Hr1G079210.4 | Barley | cytosol | 90.85 | 75.54 |
TraesCS3B01G365900.1 | Wheat | cytosol | 90.2 | 75.41 |
HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 96.73 | 74.37 |
PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 83.01 | 73.41 |
CDY30947 | Canola | cytosol | 96.08 | 70.33 |
EES01631 | Sorghum | cytosol | 84.31 | 70.11 |
AT3G43810.2 | Thale cress | cytosol | 96.73 | 69.16 |
HORVU2Hr1G016740.4 | Barley | cytosol | 96.73 | 68.84 |
Os01t0810300-01 | Rice | plasma membrane | 83.66 | 68.45 |
VIT_14s0030g02150.t01 | Wine grape | cytosol | 67.97 | 67.97 |
Zm00001d043144_P001 | Maize | plasma membrane | 81.05 | 67.76 |
Zm00001d028948_P001 | Maize | cytosol | 85.62 | 66.5 |
VIT_00s0179g00280.t01 | Wine grape | cytosol | 64.71 | 66.44 |
CDY57144 | Canola | cytosol | 63.4 | 66.44 |
CDY21220 | Canola | cytosol | 95.42 | 66.06 |
GSMUA_Achr10P... | Banana | cytosol | 77.78 | 62.96 |
GSMUA_Achr10P... | Banana | cytosol | 77.12 | 62.77 |
TraesCS5D01G068100.1 | Wheat | cytosol | 66.01 | 61.96 |
EES09201 | Sorghum | cytosol | 72.55 | 61.67 |
TraesCS5B01G137100.1 | Wheat | cytosol | 72.55 | 61.67 |
Zm00001d041430_P001 | Maize | cytosol | 67.97 | 61.54 |
TraesCS5A01G057100.1 | Wheat | cytosol | 66.01 | 61.21 |
HORVU5Hr1G044710.4 | Barley | cytosol | 71.9 | 61.11 |
TraesCS5A01G139700.1 | Wheat | cytosol | 71.9 | 61.11 |
TraesCS5D01G153400.1 | Wheat | cytosol | 71.9 | 61.11 |
EES16322 | Sorghum | cytosol | 69.93 | 60.8 |
TraesCS5A01G057200.1 | Wheat | cytosol | 64.71 | 60.74 |
Os12t0603800-00 | Rice | cytosol | 65.36 | 60.24 |
TraesCS5D01G068000.1 | Wheat | cytosol | 66.01 | 60.12 |
HORVU5Hr1G014070.2 | Barley | cytosol | 64.71 | 59.64 |
TraesCS5B01G059900.1 | Wheat | cytosol | 65.36 | 59.52 |
Zm00001d052415_P001 | Maize | cytosol | 61.44 | 59.49 |
Zm00001d005003_P002 | Maize | cytosol | 69.93 | 59.44 |
VIT_02s0241g00140.t01 | Wine grape | cytosol | 49.02 | 51.02 |
AT2G41090.1 | Thale cress | cytosol | 61.44 | 49.21 |
Os05t0491000-01 | Rice | cytosol | 47.71 | 47.1 |
HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 65.36 | 46.73 |
TraesCS1D01G308000.1 | Wheat | cytosol | 45.1 | 46.0 |
HORVU0Hr1G001280.1 | Barley | cytosol | 45.1 | 45.7 |
TraesCS1A01G308700.1 | Wheat | cytosol | 45.1 | 45.39 |
TraesCS1B01G319300.1 | Wheat | cytosol | 44.44 | 45.33 |
VIT_02s0012g02060.t01 | Wine grape | cytosol | 47.06 | 44.17 |
Zm00001d010649_P001 | Maize | extracellular | 40.52 | 43.66 |
TraesCS4B01G131100.1 | Wheat | cytosol | 65.36 | 43.29 |
VIT_05s0094g01240.t01 | Wine grape | cytosol | 46.41 | 43.03 |
TraesCS4D01G126100.1 | Wheat | cytosol | 66.67 | 42.32 |
HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 60.78 | 42.08 |
VIT_16s0039g01880.t01 | Wine grape | cytosol | 43.79 | 41.1 |
OQU78227 | Sorghum | cytosol | 47.71 | 40.78 |
VIT_01s0011g02470.t01 | Wine grape | cytosol | 38.56 | 36.42 |
VIT_07s0031g00700.t01 | Wine grape | cytosol | 45.1 | 34.16 |
VIT_17s0000g04460.t01 | Wine grape | cytosol | 35.29 | 33.75 |
GSMUA_Achr8P05790_001 | Banana | cytosol | 45.1 | 28.16 |
AT2G41100.1 | Thale cress | cytosol | 58.17 | 27.47 |
Protein Annotations
Gene3D:1.10.238.10 | EntrezGene:100232908 | wikigene:100232908 | EntrezGene:100261610 | wikigene:100261610 | MapMan:35.1 |
ProteinID:AAL58535 | ProteinID:AAL58535.1 | EMBL:AM446038 | EMBL:AY070232 | ProteinID:CAN63123 | ProteinID:CAN63123.1 |
ProteinID:CBI24333 | ProteinID:CBI24333.3 | ProteinID:CCB57150 | ProteinID:CCB57150.1 | UniProt:D7T1F3 | InterPro:EF-hand-dom_pair |
InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:FN595504 | EMBL:FN596008 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005509 | InterPro:IPR002048 | EntrezGene:LOC100232908 | wikigene:LOC100232908 | EntrezGene:LOC100261610 | wikigene:LOC100261610 |
PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 | SMART:SM00054 |
SUPFAM:SSF47473 | UniParc:UPI0001BE22CA | ArrayExpress:VIT_06s0009g01910 | EnsemblPlantsGene:VIT_06s0009g01910 | EnsemblPlants:VIT_06s0009g01910.t01 | RefSeq:XP_002270925 |
RefSeq:XP_002270925.1 | RefSeq:XP_003632228 | RefSeq:XP_003632228.1 | RefSeq:XP_003632229 | RefSeq:XP_003632229.1 | RefSeq:XP_003632230 |
RefSeq:XP_003632230.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:14126626..14129091
Molecular Weight (calculated)
17346.2 Da
IEP (calculated)
4.013
GRAVY (calculated)
-0.690
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKK RGR
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAKK RGR
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAKR RGKRVMAAKR SSNSAEYKEK NGRRKSHCRI L
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAKR RGKRVMAAKR SSNSAEYKEK NGRRKSHCRI L
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.