Factsheet for VIT_11s0016g02150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56890.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G56890.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G56890.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G56890.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G56890.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT5G56890.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G56890.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0195200-01	Rice	mitochondrion	30.29	66.74
CDY32893	Canola	cytosol, nucleus, plasma membrane	13.17	66.67
KRH02710	Soybean	cytosol, mitochondrion, plastid	13.37	66.0
GSMUA_Achr7P09140_001	Banana	plasma membrane	41.54	65.5
VIT_09s0002g02220.t01	Wine grape	plasma membrane	57.55	65.44
Os01t0709500-03	Rice	plastid	45.59	61.14
GSMUA_Achr6P04910_001	Banana	plastid	41.84	60.2
VIT_07s0005g04710.t01	Wine grape	plasma membrane	38.1	56.54
Solyc07g039340.2.1	Tomato	plastid	56.03	53.53
Bra035635.1-P	Field mustard	plasma membrane	50.46	52.59
CDY20707	Canola	plasma membrane	50.66	52.47
PGSC0003DMT400045970	Potato	plasma membrane	56.53	51.24
Bra002786.1-P	Field mustard	plasma membrane	55.22	50.89
CDY32753	Canola	plasma membrane	55.32	50.6
CDY32894	Canola	plasma membrane	54.51	50.52
GSMUA_Achr6P35830_001	Banana	mitochondrion	42.86	50.06
AT5G56890.1	Thale cress	plasma membrane	55.62	49.33
KXG33227	Sorghum	plasma membrane	46.4	46.73
KRH37393	Soybean	plasma membrane	60.59	46.68
Zm00001d011700_P014	Maize	plasma membrane	46.5	46.36
Zm00001d043684_P001	Maize	plasma membrane	39.72	46.17
KRH19175	Soybean	plasma membrane	59.07	45.91
KRH12398	Soybean	plasma membrane	60.08	45.65
OQU86148	Sorghum	vacuole	48.13	42.64
TraesCS3B01G280500.1	Wheat	plasma membrane	48.63	41.78
VIT_12s0028g01970.t01	Wine grape	plasma membrane	16.72	41.46
TraesCS3A01G251000.1	Wheat	plasma membrane	48.94	41.28
HORVU3Hr1G066880.19	Barley	plasma membrane	48.94	41.25
TraesCS3D01G251400.2	Wheat	plasma membrane	48.83	41.2
TraesCS3D01G107000.3	Wheat	plasma membrane	47.62	40.73
TraesCS3B01G123300.2	Wheat	plasma membrane	47.82	40.65
HORVU3Hr1G019140.11	Barley	plasma membrane	47.42	39.83
VIT_14s0128g00160.t01	Wine grape	plasma membrane	17.33	39.04
TraesCS3A01G104800.1	Wheat	plasma membrane	47.52	39.02
VIT_12s0028g01890.t01	Wine grape	cytosol	2.53	37.88
VIT_07s0005g01590.t01	Wine grape	cytosol, nucleus, plasma membrane	26.85	37.48
VIT_09s0002g09090.t01	Wine grape	plasma membrane	14.59	36.36
Zm00001d039465_P001	Maize	plasma membrane	28.98	35.75
VIT_04s0008g06050.t01	Wine grape	plasma membrane	15.4	33.41
VIT_09s0002g06160.t01	Wine grape	golgi, vacuole	11.25	29.52

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254143	wikigene:100254143	MapMan:18.4.1.18	Gene3D:3.30.200.20	ProteinID:CCB51442
ProteinID:CCB51442.1	UniProt:F6HGV9	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254143	wikigene:LOC100254143	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF283	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00021081F1	ArrayExpress:VIT_11s0016g02150	EnsemblPlantsGene:VIT_11s0016g02150
EnsemblPlants:VIT_11s0016g02150.t01	unigene:Vvi.15140	RefSeq:XP_003633096	RefSeq:XP_003633096.1	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:1761397..1767426

Molecular Weight (calculated)

105562.0 Da

IEP (calculated)

9.701

GRAVY (calculated)

-0.324

Length

987 amino acids

Sequence
(BLAST)

001: MTKGYVPSMP PSNPRMSPPH YKTPPHLKVP ITLPSVPPSA SQRKAPDNKA PVWAPVAPIA PVAPVPDGPP QRKWPQNPPS MHPHPVMPGL LPPSAHNRNK
101: PDNKAPISTP IAPDPDVTPI STPPLASHWR RKQMPVAAPP NRTPDPLSPV NHSPAKAPSI HNAMRHSNAP ASLSTPQSPT NKGSQSPASS PSMSFSKHHR
201: GRNKITGPAP ASSYLIPPPS PRHQGPVISP APSHPPKSLP NRTRTHHAPL PLNPGSRISP AHSPSPSSLT YPSPAPSPSP TARSGQTMIP FLSPKISPSR
301: LPPSSKMPAP PPVQALPPPP PNQDCSAIVC TEPNTNTPPG SPCGCVLPMQ VQLRLNVALY TFFPLVSELA EEIAAGVFMR QSQVRIMGAN AASPEAEKTI
401: VLIDLVPLGE KFDNTTAFLT YQRFWGKQVV IKNLFFGDYE VIYVNYPGLP PSPPSAPSSI TMIDNGPYSG QGNNGRTIHP LGVDVHKNRH KHGLSGSVIA
501: IIVLSASVAV VLCSAVAWVF LFKKTDCIGQ PVPTQAALVP SLARPPGAAG SVVGSAPSSA SLSFGSSIAT YTGSAKTFSA ADIERATDNF DDSRILGEGG
601: FGRVYSGVLE DGTKVAVKVL KRDDHQGGRE FLAEVEMLSR LHHRNLVKLI GICTEERTRC LVYELIPNGS VESHLHGADK ETAPLDWGAR IKVALGAARG
701: LAYLHEDSSP RVIHRDFKSS NILLEHDFTP KVSDFGLART AMDEENRHIS TRVMGTFGYV APEYAMTGHL LVKSDVYSYG VVLLELLTGR KPVDMSQPPG
801: QENLVAWARP LLTSKEGLQT MIDLSLGSDV PFDSVAKVAA IASMCVQPEV SHRPFMGEVV QALKLVCNEC DETKEAGSKS GSQEDLSLDL DTGVSSASGQ
901: LPDPSHAHFP VSTYGSGLDA ETGLSVSELF STSARFGRQP SGSFRRYSSS GPLRTGRARH FWQRMRRNSG GSVSEHGIMF RLRPGSH

Best Arabidopsis Sequence Match ( AT5G56890.1 )
(BLAST)

0001: MENLTLLLRI CLVSSVLVAA SSSGSELLSP LSSPPSPLPE TSKGFGQAPS NSPESHKSDN VPPSKASSQP SLPPLADLAA PPPSDSVGGK APAGVPVVFV
0101: PNAPAPATIP VKDLPVASPP VLQPITPIAS PPRFIPGDAP KEPPFSGRVT PAPVSSPVSD IPPIPSVALP PPTPSNVPPR NASNNHKPPP IEKSIAPVAS
0201: PPTISIDIAP PVHPVIPKLT PSSSPVPTST PTKGSPRRNP PTTHPVFPIE SPAVSPDHAA NPVKHPPPSD NGDDSKSPGA APANETAKPL PVFPHKASPP
0301: SIAPSAPKFN RHSHHTSPST TPPPDSTPSN VHHHPSSPSP PPLSSHHQHH QERKKIADSP APSPLPPHLI SPKKSNRKGS MTPPPQSHHA PSPPIPDSLI
0401: SPAHAPVSFS MKRISPALAP SPTQVFPLRS SSRPSKSRKF PLGPPLQAFP PPPPNSDCSS TICLEPYTNT PPGSPCGCVW PIQVELRLSM ALYDFFPMVS
0501: EFAREISAGV FMKQSQVRIM GANAASEQPE KSIVLIDLVP LGDKFDNMTA MLTYQRFWSK KVYIDEPIFG GYDVIYVRYP GLPASPPTSG MTIIDQGPYS
0601: GNNNGRAVKP LGVDVPRKPR KKELNGGSIA VIVLSAAAFI GLCFVIVWFL VFRRQRDRRR LSKRTPLARP SLPSLSKPSG SARSLTGSRF SSTSLSFESS
0701: IAPFTLSAKT FTASEIMKAT NNFDESRVLG EGGFGRVYEG VFDDGTKVAV KVLKRDDQQG SREFLAEVEM LSRLHHRNLV NLIGICIEDR NRSLVYELIP
0801: NGSVESHLHG IDKASSPLDW DARLKIALGA ARGLAYLHED SSPRVIHRDF KSSNILLEND FTPKVSDFGL ARNALDDEDN RHISTRVMGT FGYVAPEYAM
0901: TGHLLVKSDV YSYGVVLLEL LTGRKPVDMS QPPGQENLVS WTRPFLTSAE GLAAIIDQSL GPEISFDSIA KVAAIASMCV QPEVSHRPFM GEVVQALKLV
1001: SNECDEAKEL NSLTSISKDD FRDDTQAESS CGDSSARMAR YPLLPNYDSE PDTERGLSTS EMYTGSGRFE RQSNSGPLTS GRGKSFWQKM RRLSTGSLSE
1101: HGTPTVMLRS GSR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K946]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.