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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
  • plastid 1
  • cytosol 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
plastid: 20363867
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400045970 Potato plasma membrane 94.39 89.53
KRH02710 Soybean cytosol, mitochondrion, plastid 12.49 64.5
GSMUA_Achr7P09140_001 Banana plasma membrane 38.92 64.22
Os01t0195200-01 Rice mitochondrion 27.49 63.39
CDY32893 Canola cytosol, nucleus, plasma membrane 11.81 62.56
GSMUA_Achr6P04910_001 Banana plastid 40.08 60.35
VIT_11s0016g02150.t01 Wine grape plastid 53.53 56.03
Os01t0709500-03 Rice plastid 39.88 55.98
Solyc03g121610.2.1 Tomato extracellular 44.92 52.37
Solyc09g064270.2.1 Tomato mitochondrion 28.07 50.79
Bra035635.1-P Field mustard plasma membrane 45.69 49.84
CDY20707 Canola plasma membrane 45.69 49.53
Bra002786.1-P Field mustard plasma membrane 49.66 47.9
CDY32894 Canola plasma membrane 49.27 47.79
CDY32753 Canola plasma membrane 49.66 47.54
GSMUA_Achr6P35830_001 Banana mitochondrion 38.24 46.75
AT5G56890.1 Thale cress plasma membrane 50.24 46.63
KXG33227 Sorghum plasma membrane 44.14 46.53
Zm00001d011700_P014 Maize plasma membrane 43.85 45.76
Zm00001d043684_P001 Maize plasma membrane 36.69 44.64
KRH37393 Soybean plasma membrane 55.18 44.5
KRH19175 Soybean plasma membrane 54.21 44.09
KRH12398 Soybean plasma membrane 54.7 43.49
OQU86148 Sorghum vacuole 44.63 41.38
TraesCS3A01G251000.1 Wheat plasma membrane 46.85 41.37
TraesCS3B01G280500.1 Wheat plasma membrane 45.98 41.34
HORVU3Hr1G066880.19 Barley plasma membrane 46.56 41.08
Solyc07g055180.2.1 Tomato plasma membrane 15.97 41.04
TraesCS3D01G251400.2 Wheat plasma membrane 46.37 40.94
TraesCS3D01G107000.3 Wheat plasma membrane 44.53 39.86
Solyc04g045600.2.1 Tomato golgi, plasma membrane 13.46 39.83
TraesCS3B01G123300.2 Wheat plasma membrane 44.34 39.45
Solyc01g098740.2.1 Tomato plasma membrane 16.46 39.26
HORVU3Hr1G019140.11 Barley plasma membrane 44.53 39.15
TraesCS3A01G104800.1 Wheat plasma membrane 44.63 38.35
Zm00001d039465_P001 Maize plasma membrane 29.33 37.88
Solyc01g079340.2.1 Tomato mitochondrion, plasma membrane 24.49 34.56
Solyc03g117180.2.1 Tomato plasma membrane 14.23 32.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.18Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
UniProt:K4CDR0InterPro:Kinase-like_dom_sfPFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF283InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMEnsemblPlantsGene:Solyc07g039340.2EnsemblPlants:Solyc07g039340.2.1TMHMM:TMhelixUniParc:UPI000276B433
SEG:seg:::::
Description
No Description!
Coordinates
chr7:-:47174649..47181906
Molecular Weight (calculated)
110515.0 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.204
Length
1033 amino acids
Sequence
(BLAST)
0001: MGGVKLQLVC LLLQLCAFAF SMGSAGVRLS PSPSASSAVH PVEEGIPFFV SHGNASTSNA PAPALELNVA SPPANVFPPM MSPTIPKPIE VLTPSLQPSA
0101: PIILPPPSSA PPTINSAPPQ IASLPGPPPP IVWSDPAPVL PPSAPKRDHR HTEQPVVVPE APAPVSSPGR NSTEDAPTKT PPLPGSMPPS ESRSPEGPLS
0201: SIAPVLNAPS PRGMPRNSLP TLPRNPEISP SIPPATFAPP PRKLPNNSPP SHPRHPLKPP SISPVKHNIS PVSIPWPSIN RKRASAPTVA PTKGMNHQHP
0301: AKGLSVPPVL APLASPESHD SPAISSSPSA SSRPTKKPFL SPKFSPSGSS PRHPKIPHPF QALPPPPPNE DCASLACAEP FTNGPPKAPC VCVLPMRIGL
0401: RLSVALYTFF PLVSELATEV SVGVFMDKSQ VRIMGANSAS QYPEKTIVLI DLVPLGEKFD NMTAFVTSQR FWHKQVVIKS SLFGDYDVLY VQYPGLPPSP
0501: PSAASDIDTI SSQPYPGDNN GRTIQPLGVD VRGQQHKSGP SRSVIAVIVL SASVAVILCC AVAWVLLFRH RDHGYQLEPT PPTTLPSLAK SSGIAASMIG
0601: SRLNSPTLSF SSSFAAYTGS ARTFSSKEID RATDSFNEAR VLGEGGFGRV YSGVLDDGVK VAVKVLKRDD QQGGREFLAE VEMLSRLHHR NLVKLIGICL
0701: EERSRCLLYE LIPNGSVESH LHGVDKESSP LDWDARMKIA LGAARGLAYL HEDSSPRVIH RDFKSSNILL EHDFTPKVSD FGLARAALDE GERHISTRVM
0801: GTFGYVAPEY AMTGHLLVKS DVYSYGVVLL ELLTGKKPVD MSQPPGQENL VAWARPLLTS EEGLELIMDR NLGPDFPFDD IVKVAAIASM CVQPEVSHRP
0901: FMGEVVQALK LVCNECGQTK DVVSQSCSQD DLSIDMDAGV STTSSQVLNP IQPQSPVSNS DSELDVERGL SMSDLLSPLA RYGQQESGSF RRYSSSGPLR
1001: KGKTRRLWQK MRRLSGGSLS EHGVMFGLRP GSH
Best Arabidopsis Sequence Match ( AT5G56890.1 )
(BLAST)
0001: MENLTLLLRI CLVSSVLVAA SSSGSELLSP LSSPPSPLPE TSKGFGQAPS NSPESHKSDN VPPSKASSQP SLPPLADLAA PPPSDSVGGK APAGVPVVFV
0101: PNAPAPATIP VKDLPVASPP VLQPITPIAS PPRFIPGDAP KEPPFSGRVT PAPVSSPVSD IPPIPSVALP PPTPSNVPPR NASNNHKPPP IEKSIAPVAS
0201: PPTISIDIAP PVHPVIPKLT PSSSPVPTST PTKGSPRRNP PTTHPVFPIE SPAVSPDHAA NPVKHPPPSD NGDDSKSPGA APANETAKPL PVFPHKASPP
0301: SIAPSAPKFN RHSHHTSPST TPPPDSTPSN VHHHPSSPSP PPLSSHHQHH QERKKIADSP APSPLPPHLI SPKKSNRKGS MTPPPQSHHA PSPPIPDSLI
0401: SPAHAPVSFS MKRISPALAP SPTQVFPLRS SSRPSKSRKF PLGPPLQAFP PPPPNSDCSS TICLEPYTNT PPGSPCGCVW PIQVELRLSM ALYDFFPMVS
0501: EFAREISAGV FMKQSQVRIM GANAASEQPE KSIVLIDLVP LGDKFDNMTA MLTYQRFWSK KVYIDEPIFG GYDVIYVRYP GLPASPPTSG MTIIDQGPYS
0601: GNNNGRAVKP LGVDVPRKPR KKELNGGSIA VIVLSAAAFI GLCFVIVWFL VFRRQRDRRR LSKRTPLARP SLPSLSKPSG SARSLTGSRF SSTSLSFESS
0701: IAPFTLSAKT FTASEIMKAT NNFDESRVLG EGGFGRVYEG VFDDGTKVAV KVLKRDDQQG SREFLAEVEM LSRLHHRNLV NLIGICIEDR NRSLVYELIP
0801: NGSVESHLHG IDKASSPLDW DARLKIALGA ARGLAYLHED SSPRVIHRDF KSSNILLEND FTPKVSDFGL ARNALDDEDN RHISTRVMGT FGYVAPEYAM
0901: TGHLLVKSDV YSYGVVLLEL LTGRKPVDMS QPPGQENLVS WTRPFLTSAE GLAAIIDQSL GPEISFDSIA KVAAIASMCV QPEVSHRPFM GEVVQALKLV
1001: SNECDEAKEL NSLTSISKDD FRDDTQAESS CGDSSARMAR YPLLPNYDSE PDTERGLSTS EMYTGSGRFE RQSNSGPLTS GRGKSFWQKM RRLSTGSLSE
1101: HGTPTVMLRS GSR
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K946]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.