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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400006390 Potato plasma membrane 94.92 95.03
KRH44145 Soybean plasma membrane 36.57 63.28
VIT_09s0002g02220.t01 Wine grape plasma membrane 58.92 60.14
KRH23315 Soybean plasma membrane 49.77 57.8
KRH47116 Soybean plasma membrane 54.51 56.96
KRH10013 Soybean plasma membrane 48.87 55.23
Solyc09g064270.2.1 Tomato mitochondrion 31.72 49.21
KRH65720 Soybean extracellular, plasma membrane 16.7 49.17
Solyc07g039340.2.1 Tomato plastid 52.37 44.92
Solyc04g045600.2.1 Tomato golgi, plasma membrane 15.8 40.11
Solyc07g055180.2.1 Tomato plasma membrane 18.17 40.05
Solyc01g098740.2.1 Tomato plasma membrane 17.95 36.72
Solyc01g079340.2.1 Tomato mitochondrion, plasma membrane 27.2 32.92
Solyc03g117180.2.1 Tomato plasma membrane 16.48 32.74
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.18Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719
UniProt:K4BMW0InterPro:Kinase-like_dom_sfPFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF283InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g121610.2EnsemblPlants:Solyc03g121610.2.1TMHMM:TMhelixUniParc:UPI00027655A3
SEG:seg:::::
Description
No Description!
Coordinates
chr3:-:69700738..69706470
Molecular Weight (calculated)
97323.1 Da
IEP (calculated)
9.278
GRAVY (calculated)
-0.204
Length
886 amino acids
Sequence
(BLAST)
001: MGLLQSFMLL RFLVILSVLS IQLSAGFNLH SLKTAASAFL KDGRIDLSVQ RNAGSRKSLL QEDLFPTPTS RSKRHAMFAA APHLEAFHSA PHPYHHPTKA
101: TYQHKILEPS NYADAPLTST HFRNSGGKQV HSSASAPIIS SIRHHHRRNK HSDSTAKPND RLHPPSSRWS GPSISPFMSP VPSSISWAPV SSPITQPSHT
201: EIPMSTPTIS PTSSSIKRKK LRPPPLPVMT LPPPPPNHDC SSLTCTEPLT YTPPGSPCGC VWPIQVAMCL NVTLYTFFPL VSELAKEIAA GVLLNTSQVR
301: IMGANAADQQ LEKTIVHINL VPTDGKFDGT TALTIYQKFW KRAVFIKTTD FGAYEMVYVR YPGLPPSPPS RHSSSATIDD LPAYPGNENN GMTIKPLGVD
401: VSSRMRKKGI PRNMIIVIVI SSITAFVVCM GLIWLLLFKR GCYAQSPEQP PHILVSSQGK TSGDAGSMIL ASKPSSKSMS FSSSILAYTG TAKIFSTNDI
501: ERATNNFDIS RVLGEGGFGL VYSGTLDDGR KVAVKVLKRD DRQGGREFLA EVEMLSRLHH RNLVKLIGIC TEENCRCLVY ELVPNGSVES HLHGIDKEAS
601: PLDWYARMKI ALGAARGLAY LHEDSSPRVI HRDFKSSNIL LEHDFTPKVS DFGLARTALE EGNRHISTHV MGTFGYLAPE YAMTGHLLVK SDVYSYGVVL
701: LELLSGRKPV DLSQPQGQEN LVAWARPLLT TKEGLEIIID KAMESDIPID SISKVAAIAS MCVQPEVSHR PFMGEVVQAL KLVCDEFDDT RGPMSRSCSQ
801: EDLSMTDTSL VHKSIPGFDS PLNVQMELSA SELKSASARY GTVESESFRR QFNSAPLKMG RKRNFWQRLR VLSSGSMSEH SFSSKT
Best Arabidopsis Sequence Match ( AT5G56890.1 )
(BLAST)
0001: MENLTLLLRI CLVSSVLVAA SSSGSELLSP LSSPPSPLPE TSKGFGQAPS NSPESHKSDN VPPSKASSQP SLPPLADLAA PPPSDSVGGK APAGVPVVFV
0101: PNAPAPATIP VKDLPVASPP VLQPITPIAS PPRFIPGDAP KEPPFSGRVT PAPVSSPVSD IPPIPSVALP PPTPSNVPPR NASNNHKPPP IEKSIAPVAS
0201: PPTISIDIAP PVHPVIPKLT PSSSPVPTST PTKGSPRRNP PTTHPVFPIE SPAVSPDHAA NPVKHPPPSD NGDDSKSPGA APANETAKPL PVFPHKASPP
0301: SIAPSAPKFN RHSHHTSPST TPPPDSTPSN VHHHPSSPSP PPLSSHHQHH QERKKIADSP APSPLPPHLI SPKKSNRKGS MTPPPQSHHA PSPPIPDSLI
0401: SPAHAPVSFS MKRISPALAP SPTQVFPLRS SSRPSKSRKF PLGPPLQAFP PPPPNSDCSS TICLEPYTNT PPGSPCGCVW PIQVELRLSM ALYDFFPMVS
0501: EFAREISAGV FMKQSQVRIM GANAASEQPE KSIVLIDLVP LGDKFDNMTA MLTYQRFWSK KVYIDEPIFG GYDVIYVRYP GLPASPPTSG MTIIDQGPYS
0601: GNNNGRAVKP LGVDVPRKPR KKELNGGSIA VIVLSAAAFI GLCFVIVWFL VFRRQRDRRR LSKRTPLARP SLPSLSKPSG SARSLTGSRF SSTSLSFESS
0701: IAPFTLSAKT FTASEIMKAT NNFDESRVLG EGGFGRVYEG VFDDGTKVAV KVLKRDDQQG SREFLAEVEM LSRLHHRNLV NLIGICIEDR NRSLVYELIP
0801: NGSVESHLHG IDKASSPLDW DARLKIALGA ARGLAYLHED SSPRVIHRDF KSSNILLEND FTPKVSDFGL ARNALDDEDN RHISTRVMGT FGYVAPEYAM
0901: TGHLLVKSDV YSYGVVLLEL LTGRKPVDMS QPPGQENLVS WTRPFLTSAE GLAAIIDQSL GPEISFDSIA KVAAIASMCV QPEVSHRPFM GEVVQALKLV
1001: SNECDEAKEL NSLTSISKDD FRDDTQAESS CGDSSARMAR YPLLPNYDSE PDTERGLSTS EMYTGSGRFE RQSNSGPLTS GRGKSFWQKM RRLSTGSLSE
1101: HGTPTVMLRS GSR
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K946]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.