Factsheet for PGSC0003DMT400045970

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56890.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT5G56890.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT5G56890.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT5G56890.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT5G56890.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT5G56890.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g039340.2.1	Tomato	plastid	89.53	94.39
GSMUA_Achr7P09140_001	Banana	plasma membrane	36.82	64.06
Os01t0195200-01	Rice	mitochondrion	26.17	63.62
KRH02710	Soybean	cytosol, mitochondrion, plastid	11.57	63.0
CDY32893	Canola	cytosol, nucleus, plasma membrane	11.2	62.56
GSMUA_Achr6P04910_001	Banana	plastid	37.92	60.2
VIT_11s0016g02150.t01	Wine grape	plastid	51.24	56.53
Os01t0709500-03	Rice	plastid	37.28	55.16
PGSC0003DMT400006390	Potato	plasma membrane	41.97	51.64
Bra035635.1-P	Field mustard	plasma membrane	44.08	50.69
CDY20707	Canola	plasma membrane	44.08	50.37
Bra002786.1-P	Field mustard	plasma membrane	47.66	48.46
CDY32894	Canola	plasma membrane	47.38	48.45
CDY32753	Canola	plasma membrane	47.66	48.1
GSMUA_Achr6P35830_001	Banana	mitochondrion	36.91	47.57
AT5G56890.1	Thale cress	plasma membrane	48.21	47.17
KXG33227	Sorghum	plasma membrane	41.87	46.53
Zm00001d011700_P014	Maize	plasma membrane	41.69	45.86
KRH37393	Soybean	plasma membrane	53.08	45.12
KRH19175	Soybean	plasma membrane	52.34	44.88
Zm00001d043684_P001	Maize	plasma membrane	34.71	44.52
KRH12398	Soybean	plasma membrane	52.53	44.03
OQU86148	Sorghum	vacuole	44.08	43.09
TraesCS3D01G107000.3	Wheat	plasma membrane	44.08	41.59
TraesCS3A01G251000.1	Wheat	plasma membrane	44.63	41.54
TraesCS3B01G280500.1	Wheat	plasma membrane	43.8	41.51
TraesCS3B01G123300.2	Wheat	plasma membrane	43.99	41.26
HORVU3Hr1G066880.19	Barley	plasma membrane	44.35	41.25
TraesCS3D01G251400.2	Wheat	plasma membrane	44.08	41.03
HORVU3Hr1G019140.11	Barley	plasma membrane	44.08	40.85
PGSC0003DMT400052650	Potato	plasma membrane	14.88	40.3
PGSC0003DMT400045580	Potato	plasma membrane	13.31	40.28
TraesCS3A01G104800.1	Wheat	plasma membrane	44.17	40.02
PGSC0003DMT400073645	Potato	plasma membrane	15.89	39.95
Zm00001d039465_P001	Maize	plasma membrane	29.2	39.75
PGSC0003DMT400023349	Potato	mitochondrion	22.86	34.06
PGSC0003DMT400036818	Potato	plasma membrane	13.41	32.74
PGSC0003DMT400036821	Potato	plasma membrane	13.41	32.74

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102597942	MapMan:18.4.1.18	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1BIG5	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400017836	PGSC:PGSC0003DMG400017836	EnsemblPlants:PGSC0003DMT400045970
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF283	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000294FB0A	RefSeq:XP_006346571.1	SEG:seg	:	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017836]

Coordinates

chr7:-:35463234..35471257

Molecular Weight (calculated)

116542.0 Da

IEP (calculated)

8.886

GRAVY (calculated)

-0.275

Length

1089 amino acids

Sequence
(BLAST)

0001: MGGVKLQLVC LVLELCAFAF SKGSAGVSLS PSPSASSAVP PVEEGIPSFV SHGNASTSNA PAPAFELNVT SPPANVFPPL MSPPVPPPRE VLTPSLQPSA
0101: PIILPPPSSA PPAINSAPPQ IVSLPSPPPP IVWNDPAPVL PPSAPKREHR HTEQPVVVPE APAPVSSPGR KSTEDAPTKA PPLPGTMPPS ESKSPEGPLP
0201: SIAPVLNAPA PRGKPRNSLP TLPRNPEISP SIPPVLNAPS PRGKPQNPLP THPIIPEVSP SIPPVLNAPS PREKPQNPLP ARPTNPKVSP SIPPATVAPP
0301: PRRLPNNSPP SHPRHPLKPP SVSPVKHDIS PVSTPWPSIN RKRAIGPTVA PTKGMNHQHP AKGLSVPPML APLTSPESHD SPAISPSPSA SSRPTKKPFL
0401: SPKMSPSGSS PRHPKLPHPF QALPPPPPNE DCASLACAEP FTNGPPKAPC VCVLPMRIGL RLSVALYTFF PLVSELATEV SVGVFMDPSQ VRIMGANSAS
0501: QYPEKTIVLI DLVPLGEKFD NTTAFVTSQR FWHKQVVIKS LFGDYDVLYV QYPGLPPSPP SAASDIDTVG SQPYPGDNNG RTIQPLGVDV KGQQHKSGPN
0601: RSVIAVIVLS ASVAVILCCA VAWVLLFRHR DHGYQLEPTP PTTLPSLAKS SASMIGSRPN SPTLSFSSSF AAYTGSARTF SSKEIDRATD SFNEARVLGE
0701: GGFGRVYSGV LDDGMKVAVK VLKRDDQQGG REFLAEVEML SRLHHRNLVK LIGICLEERS RCLLYELIPN GSVESHLHGV DKESSPLDWN ARMKIALGAA
0801: RGLAYLHEDS SPRVIHRDFK SSNILLEHDF TPKVSDFGLA RAALDEGERH ISTRVMGTFG YVAPEYAMTG HLLVKSDVYS YGVVLLELLT GKKPVDMSQP
0901: PGQENLVAWA RPLLTSEEGL ELIVDRNLGP DFPFDDIVKV AAIASMCVQP EVSHRPFMGE VVQALKLVCN ECGQTKDVVS RSCSQDNLSI DMDTRISTTS
1001: SQVLNPIQPQ SPVSNSDSEL DVERGLSMSD LLSPLARYGR QESDSFRRYS SSGPLRKGKT RRLWQKMRRL SGGSLSEHGV MFGLRPGSH

Best Arabidopsis Sequence Match ( AT5G56890.1 )
(BLAST)

0001: MENLTLLLRI CLVSSVLVAA SSSGSELLSP LSSPPSPLPE TSKGFGQAPS NSPESHKSDN VPPSKASSQP SLPPLADLAA PPPSDSVGGK APAGVPVVFV
0101: PNAPAPATIP VKDLPVASPP VLQPITPIAS PPRFIPGDAP KEPPFSGRVT PAPVSSPVSD IPPIPSVALP PPTPSNVPPR NASNNHKPPP IEKSIAPVAS
0201: PPTISIDIAP PVHPVIPKLT PSSSPVPTST PTKGSPRRNP PTTHPVFPIE SPAVSPDHAA NPVKHPPPSD NGDDSKSPGA APANETAKPL PVFPHKASPP
0301: SIAPSAPKFN RHSHHTSPST TPPPDSTPSN VHHHPSSPSP PPLSSHHQHH QERKKIADSP APSPLPPHLI SPKKSNRKGS MTPPPQSHHA PSPPIPDSLI
0401: SPAHAPVSFS MKRISPALAP SPTQVFPLRS SSRPSKSRKF PLGPPLQAFP PPPPNSDCSS TICLEPYTNT PPGSPCGCVW PIQVELRLSM ALYDFFPMVS
0501: EFAREISAGV FMKQSQVRIM GANAASEQPE KSIVLIDLVP LGDKFDNMTA MLTYQRFWSK KVYIDEPIFG GYDVIYVRYP GLPASPPTSG MTIIDQGPYS
0601: GNNNGRAVKP LGVDVPRKPR KKELNGGSIA VIVLSAAAFI GLCFVIVWFL VFRRQRDRRR LSKRTPLARP SLPSLSKPSG SARSLTGSRF SSTSLSFESS
0701: IAPFTLSAKT FTASEIMKAT NNFDESRVLG EGGFGRVYEG VFDDGTKVAV KVLKRDDQQG SREFLAEVEM LSRLHHRNLV NLIGICIEDR NRSLVYELIP
0801: NGSVESHLHG IDKASSPLDW DARLKIALGA ARGLAYLHED SSPRVIHRDF KSSNILLEND FTPKVSDFGL ARNALDDEDN RHISTRVMGT FGYVAPEYAM
0901: TGHLLVKSDV YSYGVVLLEL LTGRKPVDMS QPPGQENLVS WTRPFLTSAE GLAAIIDQSL GPEISFDSIA KVAAIASMCV QPEVSHRPFM GEVVQALKLV
1001: SNECDEAKEL NSLTSISKDD FRDDTQAESS CGDSSARMAR YPLLPNYDSE PDTERGLSTS EMYTGSGRFE RQSNSGPLTS GRGKSFWQKM RRLSTGSLSE
1101: HGTPTVMLRS GSR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K946]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.