Factsheet for PGSC0003DMT400045580

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g045600.2.1	Tomato	golgi, plasma membrane	90.56	93.41
KRH52372	Soybean	plasma membrane	71.39	62.23
KRH61701	Soybean	plasma membrane	70.0	60.29
KRH15798	Soybean	plasma membrane	70.56	57.73
VIT_04s0008g06050.t01	Wine grape	plasma membrane	72.78	57.58
KRH05253	Soybean	plasma membrane	71.11	56.64
PGSC0003DMT400036818	Potato	plasma membrane	67.5	54.48
PGSC0003DMT400036821	Potato	plasma membrane	67.5	54.48
VIT_09s0002g06160.t01	Wine grape	golgi, vacuole	48.33	46.28
PGSC0003DMT400052650	Potato	plasma membrane	43.06	38.56
PGSC0003DMT400073645	Potato	plasma membrane	41.39	34.41
PGSC0003DMT400023349	Potato	mitochondrion	41.11	20.25
PGSC0003DMT400006390	Potato	plasma membrane	40.28	16.38
PGSC0003DMT400045970	Potato	plasma membrane	40.28	13.31

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590145	MapMan:18.4.1.40	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1BHW2	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400017680	PGSC:PGSC0003DMG400017680	EnsemblPlants:PGSC0003DMT400045580	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF62	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295584C
RefSeq:XP_006338869.1	RefSeq:XP_015164123.1	SEG:seg	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017680]

Coordinates

chr4:-:42029850..42036336

Molecular Weight (calculated)

40368.2 Da

IEP (calculated)

7.658

GRAVY (calculated)

-0.039

Length

360 amino acids

Sequence
(BLAST)

001: MDQNRRLLIA LIVASTALGL IILFWIYHTK RFHTSDVVKG MCKFNFSKSR KTLVSLMDYN ILESATNKFQ ETEILGEGGF GRVYKAKLED NLYVAVKKLT
101: QNSIKEFETE VELLSQMQHL NIISLLGYCI HSETRLLVYE LMHNGSLETQ LHGPSRGSVL TWHRRIKIAL DAARGIEYLH EQCHPPVIHR DLKSSNILLD
201: SNFNAKLSDF GLAVLGGAQN KNNIKLSGTL GYVAPEYMLD GKLSDKSDVY AFGVVLLELL LGRRPVEKEA PTECQSIVTW AMPQLTDRSK LPNIVDPVIQ
301: NTMDLKHLYQ VAAVAVLCVQ PEPSYRPLIT DVLHSLIPLL PTELGGTLRV TTQQLSPSDS

Best Arabidopsis Sequence Match ( AT4G32000.1 )
(BLAST)

001: MGKILHLLLL LLKVSVLEFI ISVSAFTSPA SQPSLSPVYT SMASFSPGIH MGKGQEHKLD AHKKLLIALI ITSSSLGLIL VSCLCFWVYW SKKSPKNTKN
101: SGESRISLSK KGFVQSFDYK TLEKATGGFK DGNLIGRGGF GDVYKACLGN NTLAAVKKIE NVSQEAKREF QNEVDLLSKI HHPNIISLFG YGNELSSSFI
201: VYELMESGSL DTQLHGPSRG SALTWHMRMK IALDTARAVE YLHERCRPPV IHRDLKSSNI LLDSSFNAKI SDFGLAVMVG AHGKNNIKLS GTLGYVAPEY
301: LLDGKLTDKS DVYAFGVVLL ELLLGRRPVE KLSSVQCQSL VTWAMPQLTD RSKLPKIVDP VIKDTMDHKH LYQVAAVAVL CVQPEPSYRP LITDVLHSLV
401: PLVPVELGGT LRLIPSSS

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT4G32000]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.