Factsheet for PGSC0003DMT400036821

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036818	Potato	plasma membrane	100.0	100.0
Solyc03g117180.2.1	Tomato	plasma membrane	97.53	97.53
Os02t0182600-00	Rice	cytosol	14.57	75.58
VIT_09s0002g09090.t01	Wine grape	plasma membrane	63.45	71.46
PGSC0003DMT400045580	Potato	plasma membrane	54.48	67.5
GSMUA_Achr7P05190_001	Banana	plasma membrane	53.36	61.34
KRH23629	Soybean	plasma membrane	56.5	59.43
KRH09675	Soybean	plasma membrane	56.73	58.16
GSMUA_Achr2P05150_001	Banana	plasma membrane	55.83	54.61
TraesCS6B01G174100.2	Wheat	plasma membrane	56.73	53.83
HORVU0Hr1G015780.7	Barley	plasma membrane	56.28	53.4
TraesCS6A01G145700.1	Wheat	plasma membrane	56.73	53.38
TraesCS7D01G500300.1	Wheat	plasma membrane	54.04	53.32
TraesCS6D01G135000.1	Wheat	plasma membrane	56.5	53.05
Zm00001d036735_P002	Maize	plasma membrane	53.14	53.02
TraesCS7B01G421800.1	Wheat	plasma membrane	54.04	52.74
TraesCS7A01G510900.1	Wheat	plasma membrane, plastid	54.04	52.62
Bra035164.1-P	Field mustard	plasma membrane	50.0	52.59
CDY39959	Canola	plasma membrane	50.22	52.46
EER88722	Sorghum	plasma membrane, plastid	54.93	52.13
HORVU7Hr1G114400.3	Barley	plasma membrane	53.59	51.96
CDX87329	Canola	plasma membrane	49.78	51.87
CDY53217	Canola	plasma membrane	48.65	51.42
Bra008449.1-P	Field mustard	plasma membrane	48.43	51.18
AT1G80640.1	Thale cress	golgi, plasma membrane, vacuole	48.88	51.05
CDY66126	Canola	plasma membrane	48.88	50.93
Zm00001d046561_P001	Maize	plasma membrane	56.05	50.0
Os05t0319700-01	Rice	plasma membrane	52.91	49.37
GSMUA_Achr4P20430_001	Banana	plasma membrane	55.16	47.04
Os08t0285600-01	Rice	plasma membrane	39.69	46.7
EES06389	Sorghum	plasma membrane	54.04	46.62
Zm00001d015527_P001	Maize	plasma membrane	53.59	46.5
PGSC0003DMT400052650	Potato	plasma membrane	34.53	38.31
PGSC0003DMT400073645	Potato	plasma membrane	34.3	35.33
PGSC0003DMT400023349	Potato	mitochondrion	35.2	21.48
PGSC0003DMT400006390	Potato	plasma membrane	32.96	16.61
PGSC0003DMT400045970	Potato	plasma membrane	32.74	13.41

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102603232	EntrezGene:102603907	MapMan:18.4.1.40	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1B4A5	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG403014197	PGSC:PGSC0003DMG403014197	EnsemblPlants:PGSC0003DMT400036821	PIRSF:PIRSF000615
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF71	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296845B
RefSeq:XP_006341375.1	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG403014197]

Coordinates

chr3:-:56954280..56961338

Molecular Weight (calculated)

49124.8 Da

IEP (calculated)

7.356

GRAVY (calculated)

0.051

Length

446 amino acids

Sequence
(BLAST)

001: MKLLILVVPI WVFVTPLLSA PVDVTPQPPS ADPVLPTEKG PIFQISSDKD APSPGVAEFK VVHHQDLNKR ILISLIVAST LLAGILLFSS CFWIYRLKTR
101: KNSVEQGHQK GEPVKGLSWG PIMAKFPSLK TVGKKGLVAV IEYQSLVAAT DNFNEKNSIG EGRLGCVYKA QFSDDVQAAV KRTHGGDQDA EKEFENEVDM
201: LSKFQHQNII SLLGYCIHSN AQFLVYEMMQ NGSLEFQLHG PPRGSALTWH LRMKIALDVA RGLEYLHERC NPPVIHRDLK SSNVLLDSNF NAKLSDFGLA
301: IAGWNLSKSN IKLSGTLGYV APEYLLDGKL TDKSDVYAFG IILLELLLGR RPVERLEGAQ CQSIVTWAMP QLTDRSKLPN IVDSVIRDGM DLKHLYQVAA
401: VAVLCVQPEP SYRPLITDVL HSFIPLVPID LGGSLRIADS ALSISA

Best Arabidopsis Sequence Match ( AT2G25220.1 )
(BLAST)

001: MRELLLLLLL HFQSLILLMI FITVSASSAS NPSLAPVYSS MATFSPRIQM GSGEEDRFDA HKKLLIGLII SFSSLGLIIL FCFGFWVYRK NQSPKSINNS
101: DSESGNSFSL LMRRLGSIKT QRRTSIQKGY VQFFDIKTLE KATGGFKESS VIGQGGFGCV YKGCLDNNVK AAVKKIENVS QEAKREFQNE VDLLSKIHHS
201: NVISLLGSAS EINSSFIVYE LMEKGSLDEQ LHGPSRGSAL TWHMRMKIAL DTARGLEYLH EHCRPPVIHR DLKSSNILLD SSFNAKISDF GLAVSLDEHG
301: KNNIKLSGTL GYVAPEYLLD GKLTDKSDVY AFGVVLLELL LGRRPVEKLT PAQCQSLVTW AMPQLTDRSK LPNIVDAVIK DTMDLKHLYQ VAAMAVLCVQ
401: PEPSYRPLIT DVLHSLVPLV PVELGGTLRL TR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IRL7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.