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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87329 Canola plasma membrane 95.08 94.86
CDY53217 Canola plasma membrane 84.07 85.07
CDY66126 Canola plasma membrane 84.31 84.11
AT1G80640.1 Thale cress golgi, plasma membrane, vacuole 82.9 82.9
Os02t0182600-00 Rice cytosol 13.82 68.6
VIT_09s0002g09090.t01 Wine grape plasma membrane 55.27 59.6
GSMUA_Achr7P05190_001 Banana plasma membrane 47.54 52.32
KRH23629 Soybean plasma membrane 50.12 50.47
Solyc03g117180.2.1 Tomato plasma membrane 52.46 50.22
PGSC0003DMT400036818 Potato plasma membrane 52.46 50.22
PGSC0003DMT400036821 Potato plasma membrane 52.46 50.22
CDX68808 Canola plasma membrane 48.48 49.88
KRH09675 Soybean plasma membrane 50.59 49.66
CDX75212 Canola plasma membrane 48.01 49.64
CDX97074 Canola plasma membrane 48.48 47.48
Zm00001d036735_P002 Maize plasma membrane 49.41 47.2
TraesCS7D01G500300.1 Wheat plasma membrane 49.88 47.12
CDY62504 Canola plasma membrane 47.78 47.11
CDY35369 Canola plasma membrane 47.78 47.11
HORVU7Hr1G114400.3 Barley plasma membrane 50.35 46.74
TraesCS7B01G421800.1 Wheat plasma membrane 49.88 46.61
CDX69790 Canola plasma membrane 47.54 46.56
TraesCS7A01G510900.1 Wheat plasma membrane, plastid 49.88 46.51
TraesCS6B01G174100.2 Wheat plasma membrane 51.05 46.38
EER88722 Sorghum plasma membrane, plastid 50.59 45.96
GSMUA_Achr2P05150_001 Banana plasma membrane 48.95 45.83
TraesCS6A01G145700.1 Wheat plasma membrane 50.82 45.78
HORVU0Hr1G015780.7 Barley plasma membrane 50.35 45.74
TraesCS6D01G135000.1 Wheat plasma membrane 50.59 45.47
CDX95260 Canola cytosol 8.9 45.24
Os05t0319700-01 Rice plasma membrane 49.41 44.14
Zm00001d046561_P001 Maize plasma membrane 51.05 43.6
EES06389 Sorghum plasma membrane 51.76 42.75
Zm00001d015527_P001 Maize plasma membrane 50.82 42.22
CDX95259 Canola cytosol 9.84 40.78
GSMUA_Achr4P20430_001 Banana plasma membrane 48.48 39.58
Os08t0285600-01 Rice plasma membrane 34.66 39.05
CDX67760 Canola plasma membrane 29.27 33.51
CDX98321 Canola plasma membrane 29.74 31.67
CDY49244 Canola plasma membrane 29.27 31.49
CDY32893 Canola cytosol, nucleus, plasma membrane 10.07 22.05
CDX71935 Canola cytosol 29.27 19.84
CDX91819 Canola plasma membrane 30.91 18.18
CDX90960 Canola plasma membrane 30.91 18.16
CDY31977 Canola plasma membrane 30.45 17.57
CDY39767 Canola plasma membrane 29.98 17.49
CDY05735 Canola plasma membrane 30.21 17.43
CDY03314 Canola plasma membrane 29.98 17.39
CDX81963 Canola plasma membrane 29.98 17.39
CDY13879 Canola plasma membrane 29.74 17.19
CDY20707 Canola plasma membrane 29.98 13.43
CDY32894 Canola plasma membrane 30.21 12.11
CDY32753 Canola plasma membrane 30.21 11.96
CDY66127 Canola nucleus 2.11 4.41
CDX75211 Canola plastid 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.40Gene3D:3.30.200.20GO:A0A078HRQ8UniProt:A0A078HRQ8EnsemblPlants:CDY39959
ProteinID:CDY39959ProteinID:CDY39959.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00068841001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF71InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF0C3FSEG:seg:
Description
BnaC06g40370DBnaC06g40370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRQ8]
Coordinates
chrLK032461:-:90362..92378
Molecular Weight (calculated)
47315.7 Da
IEP (calculated)
8.768
GRAVY (calculated)
0.028
Length
427 amino acids
Sequence
(BLAST)
001: MLRSSVPIWV LCFSFFSLAV FVSSTSQEIP ISQAYSPPVR AQSPGPPIVK VVLRQDLNKK ILIALIASST LLCVTVMLLL YLLLWRYSYM KNSFTGINPN
101: HHPDSVRSSV STKPIAHKID SVTKGTIPVY EYQLLESATN KFSESNVLSR GGRGCLYKAC LDEKSSVTVK RLDGGGDTDI IEKQFENEVD WLAKIKHQNI
201: ISMLGFSVYR QTRCIVYEMM QNGSLESLLH GTSQGSGLTW QLRMKIAVDI ARGLEYLHEH CNPPVVHRDL KSSNILLDSH FNAKISDFGY AAVSMTQGKN
301: LKLNGTLGNR ASEYIVDGKV TDKNDVYSFG VILLELLLGK KSVEKPSTTE PESVVTWVPK LSDRANLPNI LDPAIKGSMD LKHLYQVAAV AVLCVQPEPS
401: YRPLITDVLH SLIPLLPLEL GGSLRIL
Best Arabidopsis Sequence Match ( AT1G80640.1 )
(BLAST)
001: MCLLRHLLPI WVLLGFFFFS TATKSQESSV VYVSGASPEI PISQASPRMG AQSPGPPIVK VVLRQDLNKK ILIALIVSSS LLCVTVMFLV YLLLWRYRNM
101: KNSFTGIKRK SDSVKSVTTK PTVHKIDSVR KGTIPVYEYQ LLESATNKFS DSNVLSRGGR GCLYRACLDE KSSVTVKKLD GGGETDIEKQ FETEVDWLAK
201: IRHQNIVSLL GFCVYRQTSC IVYELMQNGS LESQLHGPSQ GSGLTWQLRM KIAVDIARGL EYLHEHCHPP VVHRDLKSSS ILLDSDFNAK ISDFGFATVL
301: TTQNKNLIHK ASEDLLDGKV TDKNDVYSFG VILLELLLGK KSVEKPSSEP ESIVTWAVPK LSDRANLPNI LDPAIKGTMD LKHLYQVAAV AVLCVQPEPS
401: YRPLITDVLH SLIPLLPVEL GGSLRIL
Arabidopsis Description
Probable receptor-like protein kinase At1g80640 [Source:UniProtKB/Swiss-Prot;Acc:Q0V7T5]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.