CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49244	Canola	plasma membrane	61.59	97.73
AT3G58690.1	Thale cress	plasma membrane	58.57	92.25
CDX98321	Canola	plasma membrane	57.3	90.02
CDX67760	Canola	plasma membrane	52.7	89.01
VIT_12s0028g01970.t01	Wine grape	plasma membrane	49.68	78.64
KRH27064	Soybean	plasma membrane	48.41	77.02
KRH22269	Soybean	plasma membrane	47.78	75.06
Solyc07g055180.2.1	Tomato	plasma membrane	47.14	73.88
PGSC0003DMT400052650	Potato	plasma membrane	46.67	73.13
GSMUA_Achr6P14570_001	Banana	cytosol	19.84	73.1
GSMUA_Achr6P14590_001	Banana	cytosol	24.29	72.17
VIT_12s0028g01890.t01	Wine grape	cytosol	7.14	68.18
GSMUA_Achr6P14550_001	Banana	plasma membrane	35.08	67.17
TraesCS1A01G124700.1	Wheat	plasma membrane	41.75	64.15
EES19211	Sorghum	plasma membrane	42.38	63.57
HORVU1Hr1G028780.1	Barley	plasma membrane	42.22	63.48
Zm00001d010018_P002	Maize	plasma membrane	41.9	63.31
TraesCS1B01G143700.1	Wheat	plasma membrane	41.59	63.13
TraesCS1D01G129100.1	Wheat	plasma membrane	41.9	63.01
Zm00001d037728_P001	Maize	plasma membrane	42.06	62.95
Os05t0207700-01	Rice	plasma membrane	42.22	62.74
GSMUA_AchrUn_...	Banana	cytosol	9.21	58.59
GSMUA_Achr7P25210_001	Banana	peroxisome, plasma membrane, plastid	42.38	57.92
GSMUA_Achr7P13850_001	Banana	plasma membrane, vacuole	48.1	36.91
CDX68808	Canola	plasma membrane	24.29	36.87
CDX75212	Canola	plasma membrane	24.13	36.8
CDY62504	Canola	plasma membrane	24.44	35.57
CDY35369	Canola	plasma membrane	24.44	35.57
CDX97074	Canola	plasma membrane	22.38	32.34
CDX69790	Canola	plasma membrane	22.22	32.11
CDY32893	Canola	cytosol, nucleus, plasma membrane	9.52	30.77
CDX95259	Canola	cytosol	4.92	30.1
CDY39959	Canola	plasma membrane	19.84	29.27
CDY53217	Canola	plasma membrane	19.52	29.15
CDX87329	Canola	plasma membrane	19.68	28.97
CDY66126	Canola	plasma membrane	19.52	28.74
CDX95260	Canola	cytosol	3.81	28.57
CDX91819	Canola	plasma membrane	27.46	23.83
CDX90960	Canola	plasma membrane	27.46	23.8
CDY39767	Canola	plasma membrane	26.19	22.54
CDY03314	Canola	plasma membrane	26.03	22.28
CDX81963	Canola	plasma membrane	25.87	22.15
CDY13879	Canola	plasma membrane	25.87	22.06
CDY31977	Canola	plasma membrane	25.87	22.03
CDY05735	Canola	plasma membrane	25.71	21.89
CDY20707	Canola	plasma membrane	25.56	16.89
CDY32894	Canola	plasma membrane	25.87	15.31
CDY32753	Canola	plasma membrane	25.87	15.11
CDY66127	Canola	nucleus	1.11	3.43
CDX75211	Canola	plastid	0.16	0.22

Protein Annotations

Gene3D:1.10.260.40	Gene3D:1.10.510.10	MapMan:18.4.1.18	Gene3D:3.30.200.20	GO:A0A078C4Z1	EnsemblPlants:CDX71935
ProteinID:CDX71935	ProteinID:CDX71935.1	ncoils:Coil	InterPro:Cro/C1-type_HTH	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0043565	EnsemblPlantsGene:GSBRNA2T00155691001	InterPro:IPR000719	InterPro:IPR001387
InterPro:Kinase-like_dom_sf	InterPro:Lambda_DNA-bd_dom_sf	InterPro:MBF1_N	PFAM:PF00069	PFAM:PF01381	PFAM:PF08523
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50943	PANTHER:PTHR27001	PANTHER:PTHR27001:SF92
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00530	SUPFAM:SSF47413	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EED7AC	SEG:seg	:	:	:

Description

BnaC08g29390D

Coordinates

chrLK031795:-:1375986..1379395

Molecular Weight (calculated)

69645.7 Da

IEP (calculated)

9.776

GRAVY (calculated)

-0.311

Length

630 amino acids

Sequence
(BLAST)

001: MAGVGPMTQD WEPVVIRKRA PNSAAKRDEK TVNAARRSGA DINPSENVFN AGTNKAASSS TSLNTKRLDD DTETLAHERV PTELKKAIMQ ARGEKKLTQS
101: QLAQLINEKP QVIQEYESGK AIPNQQILSK LERALGAKLR GKKNKLYGQI CQHPVNTSIL SASRNTRQYS ETVKLTFTHT HTHTSTKKKT NYTKPKALKF
201: LFPSTVINLV VLLLLLLGFP HFLVFSISGN RGGEMETDEA YQRKERDALV AIVVLACLAL TSLFVAFSYY CYIRNKVSKR HRINKKFNCE EKGDCQNQQE
301: VTDNALQIFT FKQLHSATGG FSKSNVVGHG GFGLVYRGVL NDGRKVAIKL MDNAGKQGED EFKMEVELLS RLRSPYLLAL LGYCSDNSHK LLVYEFMANG
401: GLQEHLYPTN RSGSVPLRLD WETRMRIALE AAKGLEYLHE QVSPPVIHRD FKSSNILLDR NFHAKVSDFG LAKVGSDKAG GHVSTRVLGT QGYVAPEYAL
501: TGHLTTKSDV YSYGIVLLEL LTGRVPVDMK RDTGEGVLVS WALPQLADRD KVVDIMDSTL EGQYSTKEVV QVAAIAAMCV QAEADYRPLM ADVVQSLVPL
601: VRSRRSAAKL SGCSSSFSLA RSLDSPVGSQ

Best Arabidopsis Sequence Match ( AT3G58690.1 )
(BLAST)

001: METDEAYQKK ERAALVAIVV LACLALSSLF VAFSYYCYIR NKVSKRHRIS KRFDCEEKGD CQKVQDVTEN GLQIFTFKQL HSATGGFSKS NVVGNGGFGL
101: VYRGVLNDGR KVAIKLMDHA GKQGEEEFKM EVELLSRLRS PYLLALLGYC SDNSHKLLVY EFMANGGLQE HLYLPNRSGS VPPRLDWETR MRIAVEAAKG
201: LEYLHEQVSP PVIHRDFKSS NILLDRNFNA KVSDFGLAKV GSDKAGGHVS TRVLGTQGYV APEYALTGHL TTKSDVYSYG VVLLELLTGR VPVDMKRATG
301: EGVLVSWALP QLADRDKVVD IMDPTLEGQY STKEVVQVAA IAAMCVQAEA DYRPLMADVV QSLVPLVRNR RSASKLSGCS SSFSLARSPN SPGKASIGSQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J5Y7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.