Factsheet for PGSC0003DMT400052650

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g055180.2.1	Tomato	plasma membrane	98.51	98.51
VIT_12s0028g01970.t01	Wine grape	plasma membrane	81.59	82.41
VIT_12s0028g01890.t01	Wine grape	cytosol	12.94	78.79
KRH27064	Soybean	plasma membrane	76.12	77.27
GSMUA_Achr6P14570_001	Banana	cytosol	32.59	76.61
KRH22269	Soybean	plasma membrane	75.37	75.56
AT3G58690.1	Thale cress	plasma membrane	75.12	75.5
CDX67760	Canola	plasma membrane	69.9	75.34
GSMUA_Achr6P14590_001	Banana	cytosol	39.55	75.0
CDY49244	Canola	plasma membrane	73.38	74.31
Bra007412.1-P	Field mustard	plasma membrane	73.13	74.24
CDX98321	Canola	plasma membrane	73.13	73.32
Bra003350.1-P	Field mustard	plasma membrane	58.96	72.26
GSMUA_Achr6P14550_001	Banana	plasma membrane	55.72	68.09
GSMUA_AchrUn_...	Banana	cytosol	16.67	67.68
EES19211	Sorghum	plasma membrane	68.66	65.71
TraesCS1A01G124700.1	Wheat	plasma membrane	66.92	65.61
Zm00001d037728_P001	Maize	plasma membrane	68.41	65.32
Os05t0207700-01	Rice	plasma membrane	68.66	65.09
TraesCS1B01G143700.1	Wheat	plasma membrane	66.92	64.82
TraesCS1D01G129100.1	Wheat	plasma membrane	67.41	64.68
Zm00001d010018_P002	Maize	plasma membrane	66.92	64.51
HORVU1Hr1G028780.1	Barley	plasma membrane	67.16	64.44
GSMUA_Achr7P25210_001	Banana	peroxisome, plasma membrane, plastid	67.41	58.79
PGSC0003DMT400073645	Potato	plasma membrane	53.73	49.88
CDX71935	Canola	cytosol	73.13	46.67
PGSC0003DMT400045580	Potato	plasma membrane	38.56	43.06
PGSC0003DMT400036821	Potato	plasma membrane	38.31	34.53
PGSC0003DMT400036818	Potato	plasma membrane	38.31	34.53
GSMUA_Achr7P13850_001	Banana	plasma membrane, vacuole	65.42	32.03
PGSC0003DMT400023349	Potato	mitochondrion	41.04	22.57
PGSC0003DMT400006390	Potato	plasma membrane	40.05	18.19
PGSC0003DMT400045970	Potato	plasma membrane	40.3	14.88

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102604519	MapMan:18.4.1.18	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BTS0	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400020438	PGSC:PGSC0003DMG400020438
EnsemblPlants:PGSC0003DMT400052650	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF92
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000295693D	RefSeq:XP_006348883.1	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400020438]

Coordinates

chr7:+:50302374..50306461

Molecular Weight (calculated)

44281.5 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.165

Length

402 amino acids

Sequence
(BLAST)

001: MEAENDEYHK KERAIAVTIL VFASLAIASL FVAFSYYCYI RNKVAKRLKN RTYTESACED KGNSFSNLKV IAEKGIQVFT FKQLHSATGG FGKSNVIGNG
101: AFGSVYRGVL QDGRKVAIKL MDQAGKQGEE EFKVEVELLC RLRSPYLLSL IGYCSESSHK LLVYEFMANG GLQEHLYPIK GSNNCCPKLD WKTRLRIALE
201: AAKGLEYLHE HVNPPIIHRD LKSSNILLDK NFHAKVSDFG LAKLGSDKAG GHVSTRVLGT QGYVAPEYAL TGHLTTKSDV YSYGVVLLEL LTGRVPVDMK
301: RSPGEGVLVS WALPRLTDRE KVVEIMDPAL EGQYSMKEVI QVAAIAAMCV QPEADYRPLM ADVVQSLVPL VKQPRPTVKP GSSSSFHATQ SPSPHVTQSP
401: KA

Best Arabidopsis Sequence Match ( AT3G58690.1 )
(BLAST)

001: METDEAYQKK ERAALVAIVV LACLALSSLF VAFSYYCYIR NKVSKRHRIS KRFDCEEKGD CQKVQDVTEN GLQIFTFKQL HSATGGFSKS NVVGNGGFGL
101: VYRGVLNDGR KVAIKLMDHA GKQGEEEFKM EVELLSRLRS PYLLALLGYC SDNSHKLLVY EFMANGGLQE HLYLPNRSGS VPPRLDWETR MRIAVEAAKG
201: LEYLHEQVSP PVIHRDFKSS NILLDRNFNA KVSDFGLAKV GSDKAGGHVS TRVLGTQGYV APEYALTGHL TTKSDVYSYG VVLLELLTGR VPVDMKRATG
301: EGVLVSWALP QLADRDKVVD IMDPTLEGQY STKEVVQVAA IAAMCVQAEA DYRPLMADVV QSLVPLVRNR RSASKLSGCS SSFSLARSPN SPGKASIGSQ

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J5Y7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.