Factsheet for PGSC0003DMT400073645

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g098740.2.1	Tomato	plasma membrane	97.92	97.92
VIT_14s0128g00160.t01	Wine grape	plasma membrane	70.21	69.41
GSMUA_Achr3P24820_001	Banana	mitochondrion, plastid	57.51	69.36
KRH33971	Soybean	plastid	64.43	63.27
KRG92824	Soybean	plasma membrane	63.74	62.59
AT1G54820.1	Thale cress	plasma membrane	57.97	54.8
PGSC0003DMT400052650	Potato	plasma membrane	49.88	53.73
TraesCS1B01G260300.1	Wheat	plasma membrane, plastid	57.51	52.75
TraesCS1A01G249500.1	Wheat	plasma membrane	57.27	52.43
TraesCS1D01G249000.1	Wheat	plasma membrane	57.51	52.09
EES18191	Sorghum	plastid	55.66	50.95
Os05t0398800-01	Rice	nucleus, plasma membrane, plastid	57.74	50.92
Zm00001d038135_P001	Maize	plastid	51.96	47.87
HORVU1Hr1G062130.3	Barley	plastid	56.58	43.29
PGSC0003DMT400045580	Potato	plasma membrane	34.41	41.39
PGSC0003DMT400036821	Potato	plasma membrane	35.33	34.3
PGSC0003DMT400036818	Potato	plasma membrane	35.33	34.3
PGSC0003DMT400023349	Potato	mitochondrion	37.18	22.02
PGSC0003DMT400006390	Potato	plasma membrane	36.95	18.08
PGSC0003DMT400045970	Potato	plasma membrane	39.95	15.89

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585340	MapMan:18.4.1.18	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1CSD8	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400028604	PGSC:PGSC0003DMG400028604	EnsemblPlants:PGSC0003DMT400073645	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00029657CB	RefSeq:XP_006361867.1
SEG:seg	:	:	:	:	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400028604]

Coordinates

chr1:-:76406398..76409982

Molecular Weight (calculated)

48162.1 Da

IEP (calculated)

8.925

GRAVY (calculated)

-0.171

Length

433 amino acids

Sequence
(BLAST)

001: MEDNYSESHH HSESQSHKNH QHNDILPSTS VLLIIVPIII IILLIAISLL IVMLKRIQSA KHNGTNNSSK SVINKNNCMF VAHSTIDIHL SPDVKGGCLP
101: GHGGSSGRMP ETKLRGVQVF TYKQLEMSTD KFNEANVIGN GGYGVVYRGV LIDGTVAAIK VLQREGKQWE RSFRLEVDLL SRLHSPYLVE LLGYCADQHH
201: RLLIFDYMPN GSLQQHLHSA HKQSTNSLNW GIRLRIALDC ARALEYLHEH TTPSVIHRDF KCSNVLLDQN FRAKVSDFGL AKIGSDKLNG LISTRVLGTT
301: GYLAPEYAST GKLTTKSDVY SYGVVLLELL TGRVPIDTKR PPGEHVLVSW ALPRLTNREK VVEMVDPTLQ GQYTKKDLIQ VAAIAAMCVQ TEADYRPLMT
401: DVVQSLVPLV KTYSSSCPAN SFRSYNQTVS PRS

Best Arabidopsis Sequence Match ( AT1G54820.1 )
(BLAST)

001: MNNTKMENKS HSNHHRYHHL SSRSHEQNQR GLISINAIII IGISIISIFI ILAILLIIIL LHRLKSARVK AQELSCKESF NNMNNGGAST NYSYTSSPDD
101: IKRDCLYSRN PTSFRQLPPQ TKSCRRSRAE GVEVYTYKEL EIATNNFSEE KKIGNGDVYK GVLSDGTVAA IKKLHMFNDN ASNQKHEERS FRLEVDLLSR
201: LQCPYLVELL GYCADQNHRI LIYEFMPNGT VEHHLHDHNF KNLKDRPQPL DWGARLRIAL DCARALEFLH ENTISTVIHR NFKCTNILLD QNNRAKVSDF
301: GLAKTGSDKL NGEISTRVIG TTGYLAPEYA STGKLTTKSD VYSYGIVLLQ LLTGRTPIDS RRPRGQDVLV SWALPRLTNR EKISEMVDPT MKGQYSQKDL
401: IQVAAIAAVC VQPEASYRPL MTDVVHSLIP LVKAFNKSTD SSRFPSRRES LSFDDIMP

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.