Factsheet for PGSC0003DMT400023349

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
cytosol 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol, nucleus, plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g079340.2.1	Tomato	mitochondrion, plasma membrane	97.13	96.99
VIT_07s0005g01590.t01	Wine grape	cytosol, nucleus, plasma membrane	71.41	73.83
KRG96539	Soybean	plasma membrane	66.89	67.82
KRH31783	Soybean	plasma membrane	64.3	67.43
AT4G02010.1	Thale cress	plasma membrane	66.76	67.31
KRH69205	Soybean	plasma membrane	63.89	67.19
Bra000900.1-P	Field mustard	plasma membrane	64.84	66.95
KRH68274	Soybean	plasma membrane	67.44	66.71
CDX90960	Canola	plasma membrane	65.12	65.47
CDX91819	Canola	plasma membrane	64.3	64.74
GSMUA_Achr3P08310_001	Banana	plasma membrane	58.28	59.08
GSMUA_Achr9P16550_001	Banana	plasma membrane	60.19	58.74
TraesCS3D01G178300.1	Wheat	plasma membrane	59.23	58.2
TraesCS3A01G171600.1	Wheat	plasma membrane	58.96	57.93
TraesCS3B01G202600.1	Wheat	plasma membrane	58.82	57.8
Zm00001d040270_P011	Maize	plasma membrane	58.55	55.66
OQU86612	Sorghum	plastid	59.51	50.35
PGSC0003DMT400045580	Potato	plasma membrane	20.25	41.11
PGSC0003DMT400052650	Potato	plasma membrane	22.57	41.04
PGSC0003DMT400073645	Potato	plasma membrane	22.02	37.18
PGSC0003DMT400036821	Potato	plasma membrane	21.48	35.2
PGSC0003DMT400036818	Potato	plasma membrane	21.48	35.2
PGSC0003DMT400006390	Potato	plasma membrane	32.56	26.89
PGSC0003DMT400045970	Potato	plasma membrane	34.06	22.86

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102596991	MapMan:18.4.1.18	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1AI77
PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400009047	PGSC:PGSC0003DMG400009047	EnsemblPlants:PGSC0003DMT400023349	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF118	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000294F10C	RefSeq:XP_006349178.1	SEG:seg

Description

NAK-like ser/thr protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400009047]

Coordinates

chr1:-:62813275..62822152

Molecular Weight (calculated)

79358.5 Da

IEP (calculated)

7.988

GRAVY (calculated)

-0.156

Length

731 amino acids

Sequence
(BLAST)

001: MLDLAKLLFF PCCARVSKRG QSLKPKHLTI LFYVLCITNA ELPDKPFEQQ PVSPVNKPVE APGIPDLPLP ANVPGFHRQH RKHSPHGAPW LRLAPAQPPD
101: YGPLVTAAHA PSSSSLSKPS MKKNGLVPPS AGLAPPQSSP STLPTGLAQP PLSPHTSNCC GQDMVLKRGS LDCECVYPLK IDLLLLNVSS NPNWKLFLNE
201: FASQLGLKVS QIELINFYMV DLSKLNISMD ITPDKGVSLS SNEASAVNAS LSMHKIQLDP TLVGGYQLLN ITLFKPPVSS QAPRSAMSPV EAAPNLPSAP
301: AVTVSSHKGR HPSLILIVGI VAGILIITII STLFICFCGS NHGQKKGSHK EAEKPMRVDT VPAQGSFPHP TSTRFLAYEE LKEATNNFAP SSILGEGGFG
401: KVYKGVLSDG TAVAIKRLTS GGQQGGKEFL VEVEMLSRLH HRNLVKLVGY YSSRESSQNL LCYELVSNGS LEAWLHGHLG LNCPLDWDTR MKIALDAARG
501: LAYLHEDSQP CVIHRDFKAS NILLENNFHA KVADFGLAKQ APEGQANYLS TRVMGTFGYV APEYAMTGHL LVKSDVYSYG VVLLELLTGK RPVDMAQPSG
601: QENLVTWARP ILRDKDRLEE LADPRLEGKY PKEDFVRVCT IAAACVAPEA SQRPTMGEVV QSLKMVQRVT EYQDTTTINS GARPNLRQSS TTFESDGTSS
701: MFSSGPYSGL SVFENDVSRA AVFSEDLHEG R

Best Arabidopsis Sequence Match ( AT4G02010.1 )
(BLAST)

001: MSIFSLASSS DSQRDDLIMA LKAVVIVYCV VSLVSVQLAD AQHEGLPVSP TLSPSTSPVI TDLPLPAEFP RFHRKYFAPQ QAEAPQHSPP YSRLVASDHP
101: PTSSHFSKPS MKRNAQSPGA GLADIAPAQS SNGVLPDALT QPPLSPSISN CCKSDMVLKR RSIGCHCVYP IKLDILLLNV SETPSWNMFL NEFATQLGLL
201: PHQIELINFY VLSLSRMNIS MDITPHSGIS FSASQASAIN SSLISHKIQF SPTLVGDYKL LNLTWFEAPA PSQAPLVASS PHKAPSQGSS ATTSVRSPGK
301: KRHPNLILIF SIAAGVLILA IITVLVICSR ALREEKAPDP HKEAVKPRNL DAGSFGGSLP HPASTRFLSY EELKEATSNF ESASILGEGG FGKVYRGILA
401: DGTAVAIKKL TSGGPQGDKE FQVEIDMLSR LHHRNLVKLV GYYSSRDSSQ HLLCYELVPN GSLEAWLHGP LGLNCPLDWD TRMKIALDAA RGLAYLHEDS
501: QPSVIHRDFK ASNILLENNF NAKVADFGLA KQAPEGRGNH LSTRVMGTFG YVAPEYAMTG HLLVKSDVYS YGVVLLELLT GRKPVDMSQP SGQENLVTWT
601: RPVLRDKDRL EELVDSRLEG KYPKEDFIRV CTIAAACVAP EASQRPTMGE VVQSLKMVQR VVEYQDPVLN TSNKARPNRR QSSATFESEV TSSMFSSGPY
701: SGLSAFDHEN ITRTTVFSED LHEGR

Arabidopsis Description

AT4g02010/T10M13_2 [Source:UniProtKB/TrEMBL;Acc:Q8L7V7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.