CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040270_P011	Maize	plasma membrane	79.86	89.73
TraesCS3D01G178300.1	Wheat	plasma membrane	68.4	79.44
TraesCS3A01G171600.1	Wheat	plasma membrane	68.17	79.17
TraesCS3B01G202600.1	Wheat	plasma membrane	67.82	78.76
GSMUA_Achr3P08310_001	Banana	plasma membrane	55.9	66.99
GSMUA_Achr9P16550_001	Banana	plasma membrane	56.71	65.42
VIT_07s0005g01590.t01	Wine grape	cytosol, nucleus, plasma membrane	50.93	62.23
KRH31783	Soybean	plasma membrane	49.42	61.26
KRH69205	Soybean	plasma membrane	48.61	60.43
Bra000900.1-P	Field mustard	plasma membrane	49.31	60.17
KRG96539	Soybean	plasma membrane	50.12	60.06
Solyc01g079340.2.1	Tomato	mitochondrion, plasma membrane	50.69	59.84
PGSC0003DMT400023349	Potato	mitochondrion	50.35	59.51
CDX90960	Canola	plasma membrane	49.65	59.01
AT4G02010.1	Thale cress	plasma membrane	49.42	58.9
KRH68274	Soybean	plasma membrane	50.35	58.86
CDX91819	Canola	plasma membrane	49.07	58.4
EES19211	Sorghum	plasma membrane	20.37	41.9
EES18191	Sorghum	plastid	18.75	34.25
EER88722	Sorghum	plasma membrane, plastid	18.06	33.19
KXG26687	Sorghum	plasma membrane	27.89	32.97
EES06389	Sorghum	plasma membrane	18.4	30.75
KXG31348	Sorghum	plasma membrane	26.39	30.73
KXG33227	Sorghum	plasma membrane	29.17	25.71
OQU86148	Sorghum	vacuole	30.67	23.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.18	Gene3D:3.30.200.20	EntrezGene:8072408	UniProt:A0A1W0VWW2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU86612	ProteinID:OQU86612
ProteinID:OQU86612.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF118	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3003G114700	SUPFAM:SSF56112	unigene:Sbi.19766
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0009DC91CA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:10315770..10322489

Molecular Weight (calculated)

94292.0 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.105

Length

864 amino acids

Sequence
(BLAST)

001: MGPASPAPRR ARLPPPLRRR SSSTSGGGGS CVCVPRVFVG RGWRGWGERA AAPVEVEVEV EDLTVPIPSG ARYRHLGGRT LGSRLQIRCK FEFVWAFGVV
101: GVADTSLQVV CQAPAAMDNM VEIERLVHNR IREYTLRNFV FNVLGAVLTL EFLIGINLIV QTSALEVVAP AMPPFQGWRP FRSLASQAEV LASVSAQPED
201: GIQRQKKLYS SAVAMSSVHP PISAPIYSSM PGALDLAIYS SDLSHTPVQH TRHLATAAPA HVDADPPDAA SNSSAAPSGL VQPPVSPHNG CCAPNMVQKR
301: GTRDCHCVYP VRIELFLRNV SLTSNWSNEF LQELSSQLNL RVNQFEIVNF YVVGASGLNI TMDIAPHTGI SFAADQVKAM NYSLTLHTVQ IDPVLVGDYN
401: LLNLTWFRPL APAPAPEFTI APRASPSTVS NLPRPSEGPS NNGHPSLITV VIICVGSLIG VLLIVLIICF CTFRKGKKRV PRVETPKQRT PDAVSAVESL
501: PRPTSTRFLS YEELKVATNN FEPSSVLGEG GFGRVYKGIL SDGTAVAIKK LTSGGHQGDK EFLVEVEMLS RLHHRNLVKL IGYYSSRESS QNLLCYELVP
601: NGSLEAWLHG ALGASCPLDW DTRMRIALDA ARGLAYLHED SQPCVIHRDF KASNILLEND FHAKVSDFGL AKQAPEGRTN YLSTRVMGTF GYVAPEYAMT
701: GHLLVKSDVY SYGVVLLELL TGRRPVDMSQ PSGQENLVTW ARPILRDQDR LEELADPRLG GQYPKDDFVR VCTIAAACVS PEANQRPTMG EVVQSLKMVQ
801: RSVEFQESMP TPPARPNIRQ SSTTYESDGT SSMFSSGPFS GLSPFETETI PRTAVFSEDL HEGR

Best Arabidopsis Sequence Match ( AT4G02010.1 )
(BLAST)

001: MSIFSLASSS DSQRDDLIMA LKAVVIVYCV VSLVSVQLAD AQHEGLPVSP TLSPSTSPVI TDLPLPAEFP RFHRKYFAPQ QAEAPQHSPP YSRLVASDHP
101: PTSSHFSKPS MKRNAQSPGA GLADIAPAQS SNGVLPDALT QPPLSPSISN CCKSDMVLKR RSIGCHCVYP IKLDILLLNV SETPSWNMFL NEFATQLGLL
201: PHQIELINFY VLSLSRMNIS MDITPHSGIS FSASQASAIN SSLISHKIQF SPTLVGDYKL LNLTWFEAPA PSQAPLVASS PHKAPSQGSS ATTSVRSPGK
301: KRHPNLILIF SIAAGVLILA IITVLVICSR ALREEKAPDP HKEAVKPRNL DAGSFGGSLP HPASTRFLSY EELKEATSNF ESASILGEGG FGKVYRGILA
401: DGTAVAIKKL TSGGPQGDKE FQVEIDMLSR LHHRNLVKLV GYYSSRDSSQ HLLCYELVPN GSLEAWLHGP LGLNCPLDWD TRMKIALDAA RGLAYLHEDS
501: QPSVIHRDFK ASNILLENNF NAKVADFGLA KQAPEGRGNH LSTRVMGTFG YVAPEYAMTG HLLVKSDVYS YGVVLLELLT GRKPVDMSQP SGQENLVTWT
601: RPVLRDKDRL EELVDSRLEG KYPKEDFIRV CTIAAACVAP EASQRPTMGE VVQSLKMVQR VVEYQDPVLN TSNKARPNRR QSSATFESEV TSSMFSSGPY
701: SGLSAFDHEN ITRTTVFSED LHEGR

Arabidopsis Description

AT4g02010/T10M13_2 [Source:UniProtKB/TrEMBL;Acc:Q8L7V7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.