Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002786.1-P Field mustard plasma membrane 97.13 97.85
CDY32893 Canola cytosol, nucleus, plasma membrane 17.42 96.41
CDY32894 Canola plasma membrane 92.77 93.99
CDY20707 Canola plasma membrane 73.59 83.32
AT5G56890.1 Thale cress plasma membrane 84.62 82.03
Os01t0195200-01 Rice mitochondrion 26.14 62.95
GSMUA_Achr7P09140_001 Banana plasma membrane 34.75 59.9
KRH02710 Soybean cytosol, mitochondrion, plastid 11.03 59.5
GSMUA_Achr6P04910_001 Banana plastid 36.7 57.73
Os01t0709500-03 Rice plastid 38.55 56.52
VIT_11s0016g02150.t01 Wine grape plastid 50.6 55.32
Solyc07g039340.2.1 Tomato plastid 47.54 49.66
CDY31977 Canola plasma membrane 33.92 49.46
CDY05735 Canola plasma membrane 33.64 49.05
CDY39767 Canola plasma membrane 32.81 48.36
CDX81963 Canola plasma membrane 32.9 48.23
CDY03314 Canola plasma membrane 32.9 48.23
CDY13879 Canola plasma membrane 32.9 48.04
PGSC0003DMT400045970 Potato plasma membrane 48.1 47.66
GSMUA_Achr6P35830_001 Banana mitochondrion 37.26 47.57
KXG33227 Sorghum plasma membrane 42.26 46.53
Zm00001d011700_P014 Maize plasma membrane 42.08 45.86
Zm00001d043684_P001 Maize plasma membrane 35.03 44.52
KRH37393 Soybean plasma membrane 50.88 42.86
OQU86148 Sorghum vacuole 44.21 42.82
KRH19175 Soybean plasma membrane 49.49 42.05
KRH12398 Soybean plasma membrane 50.51 41.96
CDY49244 Canola plasma membrane 15.29 41.56
TraesCS3B01G280500.1 Wheat plasma membrane 43.56 40.91
TraesCS3D01G107000.3 Wheat plasma membrane 43.37 40.55
TraesCS3B01G123300.2 Wheat plasma membrane 43.47 40.4
CDX67760 Canola plasma membrane 13.9 40.21
TraesCS3D01G251400.2 Wheat plasma membrane 43.47 40.09
HORVU3Hr1G066880.19 Barley plasma membrane 43.47 40.05
CDX98321 Canola plasma membrane 14.83 39.9
TraesCS3A01G251000.1 Wheat plasma membrane 43.19 39.83
HORVU3Hr1G019140.11 Barley plasma membrane 43.28 39.74
TraesCS3A01G104800.1 Wheat plasma membrane 43.65 39.18
Zm00001d039465_P001 Maize plasma membrane 28.08 37.88
CDX68808 Canola plasma membrane 13.81 35.9
CDX75212 Canola plasma membrane 13.72 35.84
CDX97074 Canola plasma membrane 14.37 35.55
CDX69790 Canola plasma membrane 14.18 35.09
CDX95260 Canola cytosol 2.69 34.52
CDX91819 Canola plasma membrane 23.17 34.44
CDY62504 Canola plasma membrane 13.81 34.41
CDY35369 Canola plasma membrane 13.81 34.41
CDX90960 Canola plasma membrane 23.08 34.25
CDY39959 Canola plasma membrane 11.96 30.21
CDX95259 Canola cytosol 2.87 30.1
CDX87329 Canola plasma membrane 11.68 29.44
CDY53217 Canola plasma membrane 11.49 29.38
CDY66126 Canola plasma membrane 11.49 28.97
CDX71935 Canola cytosol 15.11 25.87
CDY66127 Canola nucleus 0.37 1.96
CDX75211 Canola plastid 0.56 1.3
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.18Gene3D:3.30.200.20GO:A0A078H7C4UniProt:A0A078H7C4EnsemblPlants:CDY32753
ProteinID:CDY32753ProteinID:CDY32753.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00052809001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF283InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDE631
SEG:seg:::::
Description
BnaA10g10960DBnaA10g10960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7C4]
Coordinates
chrLK032299:+:33521..38525
Molecular Weight (calculated)
115317.0 Da
IEP (calculated)
9.381
GRAVY (calculated)
-0.300
Length
1079 amino acids
Sequence
(BLAST)
0001: MEFLMFLLRI CLVSSVLVAA SPSASGLDLL PPLSSPPSPL PEASKGFGQV RITSQPSLPP VPNVAAPPPS ISPVGDVAHP PPADSAGSRA PAGEPIVSVP
0101: NSPAPATIPV KDLPGKSPPV ASPPRDAPKE PPFSGRVSPG PVSSPVSDIP PLPSVALPPP IPSVVPPNNA SNSHKPIAPV ASPPTDISPP VHPVIPKLPS
0201: SSPVPTSSPT KGSPRRNSPI THPVFPIESP AGSPDHPPPS HNGDENKSPV AAPSNETAKP LPVIPHKASP PSIAPLVPKF NGHSHHTSPS TTPPPDTTPS
0301: NVHRTSSSAP PPPSYHRHHQ ERTKITNSPA SSPPPPPPPM HIISPKKPNR KGSVSPLPSP HHARSPPVPS LISPVHPPVS SSMHRISIAP SPSPTQVLPL
0401: RSSSRPSKSR KFPLGPPLPA FPPPPPNSDC TSTVCLEPYT NTPPGSPCGC VWPIQVELRL SMALYDFFPM VSEFAREISA GVFMKQSQVR IMGANAASEQ
0501: PDKSIVLIDL VPLGDKFDNM TAMLTYQRFW SKKVQIFGQY DVIYVRYPGL PASPPVSGMT VIDQGPYPGG DNNGRVMKPL GVDVPKKMRK KELTGETVAV
0601: IVLSAAAFIG LCFVIVWFLV FRRRRDQRVS KRAPLARPSL PSLTKPSGSA RSLTGSRLSS TSLSFASSIA PFTLSAKTFT ASEIVKATNN FAESRVLGEG
0701: GFGKVYEGLF DDGTKVAVKV LKRDDQQGGR EFLAEVEMLS RLHHRNLVNL IGICIEDRNR SLVYELIPNG SVESHLHGVD KEASPLDWEA RLKIALGAAR
0801: GLAYLHEDSS PRVIHRDFKS SNILLEHDFT PKVSDFGLAR NALDDEDNRH ISTRVMGTFG YVAPEYAMTG HLLVKSDVYS YGVVLLELLT GRKPVDMTQP
0901: PGQENLVSWT RSLLTSREGL EAIIDQSLGQ PEIPFDSIAK VAAIASMCVQ PEVSHRPFMG EVVQALKLVC NECDEAKELN SVTSLTQDEN RAESSCGGEG
1001: SGRMARYPLL PSYDSEPDTE RGLSVSEMFT GSGRLERQSN SGPLASGRGK SFWQKMRRLS TGSLSEHGSA SLMLRSGSR
Best Arabidopsis Sequence Match ( AT5G56890.1 )
(BLAST)
0001: MENLTLLLRI CLVSSVLVAA SSSGSELLSP LSSPPSPLPE TSKGFGQAPS NSPESHKSDN VPPSKASSQP SLPPLADLAA PPPSDSVGGK APAGVPVVFV
0101: PNAPAPATIP VKDLPVASPP VLQPITPIAS PPRFIPGDAP KEPPFSGRVT PAPVSSPVSD IPPIPSVALP PPTPSNVPPR NASNNHKPPP IEKSIAPVAS
0201: PPTISIDIAP PVHPVIPKLT PSSSPVPTST PTKGSPRRNP PTTHPVFPIE SPAVSPDHAA NPVKHPPPSD NGDDSKSPGA APANETAKPL PVFPHKASPP
0301: SIAPSAPKFN RHSHHTSPST TPPPDSTPSN VHHHPSSPSP PPLSSHHQHH QERKKIADSP APSPLPPHLI SPKKSNRKGS MTPPPQSHHA PSPPIPDSLI
0401: SPAHAPVSFS MKRISPALAP SPTQVFPLRS SSRPSKSRKF PLGPPLQAFP PPPPNSDCSS TICLEPYTNT PPGSPCGCVW PIQVELRLSM ALYDFFPMVS
0501: EFAREISAGV FMKQSQVRIM GANAASEQPE KSIVLIDLVP LGDKFDNMTA MLTYQRFWSK KVYIDEPIFG GYDVIYVRYP GLPASPPTSG MTIIDQGPYS
0601: GNNNGRAVKP LGVDVPRKPR KKELNGGSIA VIVLSAAAFI GLCFVIVWFL VFRRQRDRRR LSKRTPLARP SLPSLSKPSG SARSLTGSRF SSTSLSFESS
0701: IAPFTLSAKT FTASEIMKAT NNFDESRVLG EGGFGRVYEG VFDDGTKVAV KVLKRDDQQG SREFLAEVEM LSRLHHRNLV NLIGICIEDR NRSLVYELIP
0801: NGSVESHLHG IDKASSPLDW DARLKIALGA ARGLAYLHED SSPRVIHRDF KSSNILLEND FTPKVSDFGL ARNALDDEDN RHISTRVMGT FGYVAPEYAM
0901: TGHLLVKSDV YSYGVVLLEL LTGRKPVDMS QPPGQENLVS WTRPFLTSAE GLAAIIDQSL GPEISFDSIA KVAAIASMCV QPEVSHRPFM GEVVQALKLV
1001: SNECDEAKEL NSLTSISKDD FRDDTQAESS CGDSSARMAR YPLLPNYDSE PDTERGLSTS EMYTGSGRFE RQSNSGPLTS GRGKSFWQKM RRLSTGSLSE
1101: HGTPTVMLRS GSR
Arabidopsis Description
Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K946]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.