Factsheet for VIT_09s0002g06160.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

nucleus 2
plasma membrane 3
vacuole 3
extracellular 2
endoplasmic reticulum 2
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	vacuole
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g06050.t01	Wine grape	plasma membrane	63.56	52.53
PGSC0003DMT400045580	Potato	plasma membrane	46.28	48.33
Solyc04g045600.2.1	Tomato	golgi, plasma membrane	43.88	47.28
VIT_09s0002g09090.t01	Wine grape	plasma membrane	49.47	46.97
KRH52372	Soybean	plasma membrane	50.0	45.52
KRH61701	Soybean	plasma membrane	49.2	44.26
KRH15798	Soybean	plasma membrane	48.94	41.82
KRH05253	Soybean	plasma membrane	48.94	40.71
VIT_12s0028g01970.t01	Wine grape	plasma membrane	31.65	29.9
VIT_14s0128g00160.t01	Wine grape	plasma membrane	28.72	24.66
VIT_12s0028g01890.t01	Wine grape	cytosol	3.19	18.18
VIT_07s0005g04710.t01	Wine grape	plasma membrane	29.52	16.69
VIT_07s0005g01590.t01	Wine grape	cytosol, nucleus, plasma membrane	30.85	16.41
VIT_09s0002g02220.t01	Wine grape	plasma membrane	31.12	13.48
VIT_11s0016g02150.t01	Wine grape	plastid	29.52	11.25

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.90.25.10	MapMan:50.2.7	ProteinID:CCB59568	ProteinID:CCB59568.1
UniProt:F6HX98	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF62	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002109CC2	ArrayExpress:VIT_09s0002g06160	EnsemblPlantsGene:VIT_09s0002g06160	EnsemblPlants:VIT_09s0002g06160.t01	:	:

Description

No Description!

Coordinates

chr9:+:6039156..6040954

Molecular Weight (calculated)

42040.3 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.224

Length

376 amino acids

Sequence
(BLAST)

001: MVTVLRLSCF VKFQLEDAEK ALTLGPLLAK FNTMKVIGRK GYVSFIDYKV LETATNNFQE SNILGEGGFG CVYKARLDDN SHVAVKKVDG RGQDAEREFE
101: NEVDLLTKIQ HPNIISLLGY SRHEESKFLV YELMQNGSLE TQLHGPSHGS SLTWHIRMKI TLDAARGLEY LHEHCNPPVI HRDLKSSNIL LDSNFNAKLS
201: NFGLAVIDGP KNKNNLKLSG TLGYLAPEYL LDGTESKLLI IAQNCWYGIP ERGLVDSLTW ELYFRLTKSD FREPVNIGSD EMVSMNEMAE IVLSFENKNL
301: PIHHIPGPEG VRGRNSHNNL IKEKLVGFPC CSPEAELLHF VTSAEFCSKD SADGSLEVLS ITHFLLSSHL TSEKAS

Best Arabidopsis Sequence Match ( AT2G25220.6 )
(BLAST)

001: MRELLLLLLL HFQSLILLMI FITVSASSAS NPSLAPVYSS MATFSPRIQM GSGEEDRFDA HKKLLIGLII SFSSLGLIIL FCFGFWVYRK NQSPKSINNS
101: DSESGNSFSL LMRRLGSIKT QRRTSIQKGY VQFFDIKTLE KATGGFKESS VIGQGGFGCV YKGCLDNNVK AAVKKIENVS QEAKREFQNE VDLLSKIHHS
201: NVISLLGSAS EINSSFIVYE LMEKGSLDEQ LHGPSRGSAL TWHMRMKIAL DTARGLEYLH EHCRPPVIHR DLKSSNILLD SSFNAKISDF GLAVSLDEHG
301: KNNIKLSGTL GYVAPEYLLD GKLTDKSDVY AFGVVLLELL LGRRPVEKLT PAQCQSLVTW VRFNNFLRTK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IRL7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.