Factsheet for VIT_04s0008g06050.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 8
endoplasmic reticulum 5
vacuole 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045580	Potato	plasma membrane	57.58	72.78
Solyc04g045600.2.1	Tomato	golgi, plasma membrane	55.38	72.21
KRH52372	Soybean	plasma membrane	65.49	72.16
VIT_09s0002g09090.t01	Wine grape	plasma membrane	60.44	69.44
KRH61701	Soybean	plasma membrane	63.3	68.9
KRH15798	Soybean	plasma membrane	66.59	68.86
KRH05253	Soybean	plasma membrane	66.81	67.26
VIT_09s0002g06160.t01	Wine grape	golgi, vacuole	52.53	63.56
VIT_12s0028g01970.t01	Wine grape	plasma membrane	37.36	42.71
VIT_12s0028g01890.t01	Wine grape	cytosol	5.27	36.36
VIT_14s0128g00160.t01	Wine grape	plasma membrane	33.85	35.16
VIT_07s0005g01590.t01	Wine grape	cytosol, nucleus, plasma membrane	36.7	23.62
VIT_07s0005g04710.t01	Wine grape	plasma membrane	33.63	23.01
VIT_09s0002g02220.t01	Wine grape	plasma membrane	36.48	19.12
VIT_11s0016g02150.t01	Wine grape	plastid	33.41	15.4

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100264651	wikigene:100264651	MapMan:18.4.1.40	Gene3D:3.30.200.20	EMBL:AM441038
ProteinID:CAN76226	ProteinID:CAN76226.1	ProteinID:CBI21096	ProteinID:CBI21096.3	UniProt:D7SUZ7	EMBL:FN595231
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100264651
wikigene:LOC100264651	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF62	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TIGR:TC55992	TMHMM:TMhelix	UniParc:UPI0001BE1AFF	ArrayExpress:VIT_04s0008g06050	EnsemblPlantsGene:VIT_04s0008g06050
EnsemblPlants:VIT_04s0008g06050.t01	unigene:Vvi.9363	RefSeq:XP_002285386	RefSeq:XP_002285386.2	SEG:seg	:

Description

No Description!

Coordinates

chr4:-:5740344..5744103

Molecular Weight (calculated)

49486.8 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.016

Length

455 amino acids

Sequence
(BLAST)

001: MKFFLLILPL LQSIWSFHFS IVEAISDPPL SSISAPLSSP PIGATSPISS SMAAFSPAIQ EGSEENQKDS HKKTFIALTV ASAALGVTIL ILLSLWIHKK
101: CSQKSHKSNA QSSDAEKALT LGPLLAKFNT MKVIGRKGSV SCIDYKVLET ATNNFQESNI LGEGGFGCVY KARLDDNSHV AVKKIDGRGQ DAEREFENEV
201: DLLTKIQHPN IISLLGYSSH EESKFLVYEL MQNGSLETEL HGPSHGSSLT WHIRMKIALD AARGLEYLHE HCNPPVIHRD LKSSNILLDS NFNAKLSDFG
301: LAVIDGPQNK NNLKLSGTLG YLAPEYLLDG KLTDKSDVYA FGVVLLELLL GRKPVEKLAP AQCQSIVTWA MPQLTDRSKL PGIVDPVVRD TMDLKHLYQV
401: AAVAVLCVQP EPSYRPLITD VLHSLIPLVP VELGGMLKVT QQAPPINTTA PSAGG

Best Arabidopsis Sequence Match ( AT2G25220.1 )
(BLAST)

001: MRELLLLLLL HFQSLILLMI FITVSASSAS NPSLAPVYSS MATFSPRIQM GSGEEDRFDA HKKLLIGLII SFSSLGLIIL FCFGFWVYRK NQSPKSINNS
101: DSESGNSFSL LMRRLGSIKT QRRTSIQKGY VQFFDIKTLE KATGGFKESS VIGQGGFGCV YKGCLDNNVK AAVKKIENVS QEAKREFQNE VDLLSKIHHS
201: NVISLLGSAS EINSSFIVYE LMEKGSLDEQ LHGPSRGSAL TWHMRMKIAL DTARGLEYLH EHCRPPVIHR DLKSSNILLD SSFNAKISDF GLAVSLDEHG
301: KNNIKLSGTL GYVAPEYLLD GKLTDKSDVY AFGVVLLELL LGRRPVEKLT PAQCQSLVTW AMPQLTDRSK LPNIVDAVIK DTMDLKHLYQ VAAMAVLCVQ
401: PEPSYRPLIT DVLHSLVPLV PVELGGTLRL TR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IRL7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.