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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g098160.2.1
Solyc01g102260.2.1
Solyc01g102680.2.1
Solyc01g109120.2.1
Solyc02g064980.1.1
Solyc02g065430.1.1
Solyc02g067220.2.1
Solyc02g067560.1.1
Solyc02g071740.2.1
Solyc02g079100.2.1
Solyc02g084640.2.1
Solyc02g087460.1.1
Solyc02g088090.1.1
Solyc02g089420.1.1
Solyc02g089990.1.1
Solyc02g090970.1.1
Solyc02g090980.1.1
Solyc02g090990.1.1
Solyc02g092640.2.1
Solyc02g092930.1.1
Solyc02g093410.2.1
Solyc03g005920.2.1
Solyc03g044140.2.1
Solyc03g044860.1.1
Solyc03g046440.1.1
Solyc03g083420.2.1
Solyc03g113390.2.1
Solyc03g114680.2.1
Solyc03g114830.2.1
Solyc04g005320.2.1
Solyc04g014410.2.1
Solyc04g025600.1.1
Solyc04g025970.1.1
Solyc04g074980.2.1
Solyc04g079710.2.1
Solyc04g082840.2.1
Solyc04g082880.2.1
Solyc05g012020.2.1
Solyc05g053300.2.1
Solyc06g050350.2.1
Solyc06g053560.2.1
Solyc06g054640.1.1
Solyc06g069430.2.1
Solyc06g083900.2.1
Solyc07g039340.2.1
Solyc07g053450.2.1
Solyc07g055200.2.1
Solyc08g008170.2.1
Solyc08g008280.2.1
Solyc08g077730.2.1
Solyc08g082110.2.1
Solyc09g011060.2.1
Solyc09g011990.1.1
Solyc09g012000.1.1
Solyc09g015520.2.1
Solyc09g074240.1.1
Solyc09g090200.2.1
Solyc09g090250.2.1
Solyc11g010730.1.1
Solyc11g061720.1.1
Solyc11g069460.1.1
Solyc12g009570.1.1
Solyc12g010800.1.1
Solyc12g095760.1.1
Solyc12g099100.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14640.1 Solyc04g082840.2.1 AT1G20930.1 17360592
AT4G14640.1 Solyc04g082880.2.1 AT1G20950.1 17360592
AT4G14640.1 Solyc12g095760.1.1 AT1G20950.1 17360592
AT4G14640.1 Solyc11g061720.1.1 AT1G51170.1 17360592
AT4G14640.1 Solyc01g098160.2.1 AT1G54610.1 17360592
AT4G14640.1 Solyc03g113390.2.1 AT1G74740.1 17360592
AT4G14640.1 Solyc06g054640.1.1 AT1G77145.1 17360592
AT4G14640.1 Solyc04g005320.2.1 AT2G03710.1 17360592
AT4G14640.1 Solyc05g012020.2.1 AT2G03710.1 17360592
AT4G14640.1 Solyc02g092640.2.1 AT2G23080.1 17360592
AT4G14640.1 Solyc03g044140.2.1 AT2G23080.1 17360592
AT4G14640.1 Solyc02g092930.1.1 AT2G23290.1 17360592
AT4G14640.1 Solyc04g025970.1.1 AT2G24840.1 17360592
AT4G14640.1 Solyc11g069460.1.1 AT2G28380.1 17360592
AT4G14640.1 Solyc04g025600.1.1 AT2G30980.1 17360592
AT4G14640.1 Solyc07g055200.2.1 AT2G30980.1 17360592
AT4G14640.1 Solyc06g083900.2.1 AT2G31180.1 17360592
AT4G14640.1 Solyc09g074240.1.1 AT2G48010.1 17360592
AT4G14640.1 Solyc01g098160.2.1 AT3G05050.1 17360592
AT4G14640.1 Solyc05g053300.2.1 AT3G17240.1 17360592
AT4G14640.1 Solyc12g099100.1.1 AT3G17240.1 17360592
AT4G14640.1 Solyc09g090200.2.1 AT3G23310.1 17360592
AT4G14640.1 Solyc02g067560.1.1 AT3G28450.1 17360592
AT4G14640.1 Solyc02g087460.1.1 AT3G28450.1 17360592
AT4G14640.1 Solyc02g064980.1.1 AT3G50310.1 17360592
AT4G14640.1 Solyc02g090970.1.1 AT3G50310.1 17360592
AT4G14640.1 Solyc02g090980.1.1 AT3G50310.1 17360592
AT4G14640.1 Solyc02g090990.1.1 AT3G50310.1 17360592
AT4G14640.1 Solyc06g050350.2.1 AT3G56270.1 17360592
AT4G14640.1 Solyc07g053450.2.1 AT3G58120.1 17360592
AT4G14640.1 Solyc12g010800.1.1 AT3G58120.1 17360592
AT4G14640.1 Solyc09g011060.2.1 AT4G02410.1 17360592
AT4G14640.1 Solyc09g011990.1.1 AT4G02410.1 17360592
AT4G14640.1 Solyc09g012000.1.1 AT4G02410.1 17360592
AT4G14640.1 Solyc06g053560.2.1 AT4G14340.1 17360592
AT4G14640.1 Solyc09g090250.2.1 AT4G14340.1 17360592
AT4G14640.1 Solyc08g077730.2.1 AT4G17080.1 17360592
AT4G14640.1 Solyc02g071740.2.1 AT4G18950.1 17360592
AT4G14640.1 Solyc03g005920.2.1 AT4G18950.1 17360592
AT4G14640.1 Solyc02g079100.2.1 AT4G21470.1 17360592
AT4G14640.1 Solyc08g008170.2.1 AT4G23650.1 17360592
AT4G14640.1 Solyc08g008280.2.1 AT4G23810.1 17360592
AT4G14640.1 Solyc08g082110.2.1 AT4G23810.1 17360592
AT4G14640.1 Solyc04g074980.2.1 AT4G24390.1 17360592
AT4G14640.1 Solyc01g109120.2.1 AT4G34380.1 17360592
AT4G14640.1 Solyc02g084640.2.1 AT4G36250.1 17360592
AT4G14640.1 Solyc02g065430.1.1 AT4G37240.1 17360592
AT4G14640.1 Solyc02g089990.1.1 AT4G37240.1 17360592
AT4G14640.1 Solyc03g044860.1.1 AT4G37240.1 17360592
AT4G14640.1 Solyc09g015520.2.1 AT5G01890.1 17360592
AT4G14640.1 Solyc03g114680.2.1 AT5G08139.1 17360592
AT4G14640.1 Solyc04g014410.2.1 AT5G10520.1 17360592
AT4G14640.1 Solyc11g010730.1.1 AT5G10520.1 17360592
AT4G14640.1 Solyc02g089420.1.1 AT5G15830.1 17360592
AT4G14640.1 Solyc03g046440.1.1 AT5G15830.1 17360592
AT4G14640.1 Solyc12g009570.1.1 AT5G35410.1 17360592
AT4G14640.1 Solyc02g089420.1.1 AT5G38800.1 17360592
AT4G14640.1 Solyc03g046440.1.1 AT5G38800.1 17360592
AT4G14640.1 Solyc02g067220.2.1 AT5G39670.1 17360592
AT4G14640.1 Solyc02g088090.1.1 AT5G39670.1 17360592
AT4G14640.1 Solyc02g093410.2.1 AT5G40540.1 17360592
AT4G14640.1 Solyc01g102260.2.1 AT5G48670.1 17360592
AT4G14640.1 Solyc01g102680.2.1 AT5G49760.1 17360592
AT4G14640.1 Solyc03g083420.2.1 AT5G53450.1 17360592
AT4G14640.1 Solyc07g039340.2.1 AT5G56890.1 17360592
AT4G14640.1 Solyc03g114830.2.1 AT5G60910.1 17360592
AT4G14640.1 Solyc06g069430.2.1 AT5G60910.1 17360592
AT4G14640.1 Solyc04g079710.2.1 AT5G66790.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400042062 Potato cytosol 97.99 97.33
KRG92449 Soybean cytosol 87.92 87.33
VIT_05s0020g04420.t01 Wine grape cytosol 87.25 87.25
KRH34350 Soybean cytosol 87.25 86.67
KRH31638 Soybean cytosol 87.25 86.67
KRH69070 Soybean cytosol 86.58 86.0
AT4G14640.1 Thale cress cytosol 83.22 82.12
GSMUA_Achr1P04700_001 Banana cytosol 80.54 81.08
GSMUA_Achr1P27230_001 Banana cytosol 79.87 80.41
GSMUA_Achr6P24410_001 Banana cytosol 79.19 79.19
Bra001892.1-P Field mustard cytosol 81.21 78.57
CDX92965 Canola cytosol 81.21 78.57
GSMUA_Achr2P12680_001 Banana cytosol 77.85 78.38
GSMUA_Achr4P22570_001 Banana cytosol 77.85 78.38
Solyc10g077010.1.1 Tomato cytosol 77.85 77.85
Solyc11g072240.1.1 Tomato cytosol 77.85 77.85
Solyc01g008950.2.1 Tomato nucleus 77.85 77.85
Solyc12g099990.1.1 Tomato nucleus 77.85 77.85
GSMUA_Achr7P01390_001 Banana cytosol 77.18 77.7
CDY34215 Canola cytosol 81.21 77.56
Bra023786.1-P Field mustard cytosol 81.21 77.56
CDY06478 Canola cytosol 78.52 77.48
Bra033898.1-P Field mustard cytosol 80.54 77.42
Solyc10g081170.1.1 Tomato extracellular 77.18 77.18
CDY10686 Canola cytosol 79.87 76.77
Bra039723.1-P Field mustard cytosol 78.52 76.47
Solyc03g098050.2.1 Tomato nucleus 75.84 75.84
GSMUA_Achr5P09010_001 Banana cytosol 73.15 73.65
CDX94883 Canola cytosol 54.36 72.97
CDY10325 Canola cytosol 53.69 70.8
AT3G22930.1 Thale cress cytosol 81.21 69.94
Solyc03g005240.1.1 Tomato cytosol 71.81 69.93
CDY40824 Canola cytosol 81.21 67.22
Os03t0743500-02 Rice nucleus 67.11 64.94
KXG37587 Sorghum cytosol 66.44 64.29
Solyc01g105630.2.1 Tomato cytosol 63.09 63.95
Zm00001d033980_P001 Maize cytosol 54.36 51.59
GSMUA_Achr3P25390_001 Banana cytosol 61.07 49.73
TraesCS5A01G382800.2 Wheat plastid 61.74 49.2
GSMUA_Achr1P14070_001 Banana cytosol 70.47 46.46
Solyc03g097100.1.1 Tomato cytosol 48.99 44.79
Solyc03g083520.2.1 Tomato cytosol, nucleus 41.61 41.33
Solyc11g072270.1.1 Tomato cytosol 39.6 37.82
Solyc04g026350.2.1 Tomato cytosol 42.95 36.99
Solyc02g090810.2.1 Tomato cytosol, mitochondrion 40.94 36.31
Solyc01g010020.2.1 Tomato cytosol 38.26 35.4
Solyc03g114420.1.1 Tomato cytosol 38.26 33.33
KXG37588 Sorghum mitochondrion, nucleus 0.67 0.73
Protein Annotations
EnsemblPlants:Solyc06g053930.2.1EnsemblPlantsGene:Solyc06g053930.2Gene3D:1.10.238.10GO:GO:0003674GO:GO:0005488GO:GO:0005509
InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domInterPro:IPR002048PANTHER:PTHR23050PANTHER:PTHR23050:SF336
PFAM:PF13499PFscan:PS50222ScanProsite:PS00018SMART:SM00054SUPFAM:SSF47473UniParc:UPI000276596E
UniProt:K4C680MapMan:35.1::::
Description
No Description!
Coordinates
chr6:+:36838649..36840560
Molecular Weight (calculated)
16955.8 Da
IEP (calculated)
3.724
GRAVY (calculated)
-0.516
Length
149 amino acids
Sequence
(BLAST)
001: MGDVLNNDQI VELQEAFSLF DRDGDGCITV EELATVIRSL DQNPTEEELQ DMITEVDSDG NGTIEFTEFL NLMAKKMKDT DAEEELKEAF KVFDKDQNGY
101: ISANELRHVM INLGEKLTDE EVEQMIKEAD LDGDGQVNFD EFVKMMMNV
Best Arabidopsis Sequence Match ( AT4G14640.1 )
(BLAST)
001: MEETALTKDQ ITEFKEAFCL FDKDGDGCIT VEELATVIRS LDQNPTEQEL HDIITEIDSD SNGTIEFAEF LNLMAKKLQE SDAEEELKEA FKVFDKDQNG
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D
Arabidopsis Description
CML8Calmodulin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O23320]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.