Factsheet for Solyc03g044860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc06g073150.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g017300.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37240.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT4G37240.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT4G37240.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT4G37240.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT4G37240.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT4G37240.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT4G37240.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT4G37240.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT4G37240.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT4G37240.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT4G37240.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT4G37240.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT4G37240.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT4G37240.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT4G37240.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT4G37240.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT4G37240.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT4G37240.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT4G37240.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059007	Potato	cytosol, nucleus, plastid	88.36	88.97
Solyc02g089990.1.1	Tomato	nucleus	66.44	60.25
Solyc02g065430.1.1	Tomato	cytosol	60.96	58.55
VIT_00s0207g00180.t01	Wine grape	cytosol	61.64	55.21
VIT_00s0207g00140.t01	Wine grape	cytosol	60.96	54.6
KRH76906	Soybean	cytosol	56.85	52.2
CDX89594	Canola	cytosol	56.85	50.92
Bra032151.1-P	Field mustard	cytosol	56.16	50.31
CDY46066	Canola	cytosol	56.16	50.31
CDY39665	Canola	cytosol	56.16	50.31
CDX76853	Canola	cytosol	56.16	50.0
AT2G23690.1	Thale cress	cytosol	55.48	49.69
AT4G37240.1	Thale cress	cytosol, nucleus, plastid	56.16	48.81
CDY24764	Canola	cytosol, nucleus, plastid	56.85	47.98
CDX69254	Canola	cytosol	58.22	47.75
CDY22462	Canola	cytosol, nucleus, plastid	56.16	47.4
KRH28562	Soybean	cytosol	52.74	47.24
CDX75606	Canola	nucleus	56.16	46.86
Bra011715.1-P	Field mustard	nucleus	56.16	46.86
Bra017789.1-P	Field mustard	nucleus	54.11	46.2
CDY42708	Canola	nucleus	53.42	45.61
Bra039208.1-P	Field mustard	cytosol	43.15	45.32
CDX72612	Canola	nucleus	52.05	44.44
Bra010578.1-P	Field mustard	cytosol, nucleus, plastid	45.21	44.0
KRH69989	Soybean	cytosol	47.95	42.42
KRH08345	Soybean	cytosol	49.32	42.11
GSMUA_Achr2P08730_001	Banana	cytosol	47.26	41.57
GSMUA_Achr7P27420_001	Banana	cytosol	46.58	41.21
TraesCS5A01G379900.1	Wheat	plastid	36.99	32.34
TraesCS5B01G383500.1	Wheat	plastid	37.67	31.98
TraesCS5D01G389400.1	Wheat	plastid	36.99	31.95
Zm00001d013311_P001	Maize	plastid	34.93	31.88
Os03t0740200-00	Rice	plastid	36.99	31.76
KXG37596	Sorghum	cytosol, nucleus, plastid	35.62	31.14
Zm00001d033943_P001	Maize	plastid	34.93	30.72
TraesCS5A01G404200.1	Wheat	cytosol	36.99	30.68
TraesCS5D01G414000.1	Wheat	cytosol	36.99	30.17
Zm00001d034190_P001	Maize	cytosol	36.99	29.67
TraesCS5D01G414200.1	Wheat	cytosol	35.62	29.55
HORVU5Hr1G098280.1	Barley	cytosol	35.62	29.55
TraesCS5A01G404100.1	Wheat	cytosol	35.62	29.55
TraesCS5B01G408800.1	Wheat	cytosol	34.93	28.98
Solyc01g109250.2.1	Tomato	extracellular	29.45	28.67
Zm00001d013178_P001	Maize	cytosol	36.3	28.49
TraesCS5D01G414100.1	Wheat	cytosol	34.93	28.49
TraesCS5D01G414300.1	Wheat	cytosol	34.25	28.41
HORVU5Hr1G098290.1	Barley	cytosol	34.25	28.41
Os03t0768900-00	Rice	cytosol	34.25	28.41
HORVU5Hr1G093900.1	Barley	plastid	33.56	28.0
TraesCS5A01G404000.1	Wheat	cytosol	34.25	27.93
TraesCS5B01G408700.1	Wheat	cytosol	34.93	27.72
EER93387	Sorghum	cytosol	35.62	27.66
TraesCS5B01G409000.1	Wheat	cytosol	32.19	27.49
TraesCS1D01G444800.1	Wheat	cytosol, plastid	34.25	26.88
TraesCS1B01G471500.1	Wheat	mitochondrion	33.56	26.49
TraesCS2B01G276100.1	Wheat	cytosol, extracellular, plastid	33.56	26.06
TraesCS1A01G436400.1	Wheat	plastid	33.56	25.93
HORVU1Hr1G094330.1	Barley	cytosol	32.88	25.67
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	32.88	25.53
TraesCS2A01G266100.1	Wheat	cytosol	28.77	25.45
TraesCS1A01G436300.1	Wheat	mitochondrion	32.88	25.26
Solyc04g082960.1.1	Tomato	cytosol	32.19	25.13
TraesCS2B01G276000.1	Wheat	cytosol, nucleus, plastid	32.19	25.0
TraesCS2A01G266000.1	Wheat	plastid	32.88	25.0
HORVU2Hr1G061800.1	Barley	plastid	32.19	24.74
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	31.51	24.73
TraesCS2D01G257800.1	Wheat	plastid	32.19	24.48
Os07t0123100-00	Rice	extracellular	34.25	24.39
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	34.93	23.83
TraesCS5A01G403900.1	Wheat	plastid	37.67	23.61
Zm00001d018717_P001	Maize	cytosol	29.45	22.16
EER95817	Sorghum	nucleus	29.45	22.16
Zm00001d007974_P001	Maize	nucleus	26.71	20.21
HORVU2Hr1G061850.1	Barley	extracellular, plastid	22.6	16.67

Protein Annotations

EnsemblPlants:Solyc03g044860.1.1	EnsemblPlantsGene:Solyc03g044860.1	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF17	PFAM:PF14009
SEG:seg	UniParc:UPI000276854B	UniProt:K4BG99	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3:+:10712666..10713106

Molecular Weight (calculated)

16217.5 Da

IEP (calculated)

8.942

GRAVY (calculated)

-0.399

Length

146 amino acids

Sequence
(BLAST)

001: MGICNSCEST SVATAKIILQ DGRLQEFSYP IKAWYLLQKD PTIFICNSDE MEFGDKISAI NAEEELQLGQ LYFAMPLKRL KSRLGAEEMA ALAVKASSAL
101: KRTSSSNKLF VFSQQKNCDR VTRNGDDGDS GRRRGKKTAK LSVIPE

Best Arabidopsis Sequence Match ( AT2G23690.1 )
(BLAST)

001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE

Arabidopsis Description

HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.