Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 81.88 | 78.44 |
| Zm00001d033943_P001 | Maize | plastid | 80.62 | 77.71 |
| Os03t0740200-00 | Rice | plastid | 76.25 | 71.76 |
| TraesCS5A01G379900.1 | Wheat | plastid | 70.0 | 67.07 |
| TraesCS5B01G383500.1 | Wheat | plastid | 71.88 | 66.86 |
| TraesCS5D01G389400.1 | Wheat | plastid | 69.38 | 65.68 |
| HORVU5Hr1G093900.1 | Barley | plastid | 64.38 | 58.86 |
| Zm00001d034190_P001 | Maize | cytosol | 49.38 | 43.41 |
| Zm00001d013178_P001 | Maize | cytosol | 48.12 | 41.4 |
| Bra012084.1-P | Field mustard | cytosol | 33.12 | 37.86 |
| CDY45243 | Canola | cytosol | 33.12 | 37.86 |
| CDX81387 | Canola | cytosol | 35.62 | 36.77 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 38.12 | 36.75 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 37.5 | 36.36 |
| Zm00001d018717_P001 | Maize | cytosol | 43.75 | 36.08 |
| Solyc02g089990.1.1 | Tomato | nucleus | 36.25 | 36.02 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 32.5 | 35.86 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 36.25 | 35.8 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 33.75 | 35.53 |
| Bra037163.1-P | Field mustard | cytosol | 34.38 | 35.48 |
| CDY18612 | Canola | cytosol | 34.38 | 35.48 |
| CDX77946 | Canola | cytosol | 32.5 | 35.14 |
| Solyc03g044860.1.1 | Tomato | cytosol | 31.88 | 34.93 |
| AT5G66580.1 | Thale cress | cytosol | 33.75 | 34.62 |
| Bra036862.1-P | Field mustard | cytosol | 31.88 | 34.46 |
| CDY55087 | Canola | cytosol | 32.5 | 34.44 |
| Bra031814.1-P | Field mustard | cytosol | 32.5 | 34.44 |
| CDX73789 | Canola | cytosol | 32.5 | 33.99 |
| CDY28982 | Canola | nucleus | 33.12 | 33.97 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 33.12 | 33.97 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 33.12 | 33.97 |
| Solyc02g065430.1.1 | Tomato | cytosol | 31.88 | 33.55 |
| PGSC0003DMT400007187 | Potato | cytosol | 31.88 | 33.55 |
| CDY28078 | Canola | cytosol | 33.12 | 33.12 |
| KRH76906 | Soybean | cytosol | 32.5 | 32.7 |
| Zm00001d007974_P001 | Maize | nucleus | 39.38 | 32.64 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 32.5 | 31.9 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 32.5 | 31.9 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 33.75 | 31.03 |
| KRH28562 | Soybean | cytosol | 31.25 | 30.67 |
| Bra017789.1-P | Field mustard | nucleus | 32.5 | 30.41 |
| CDX72612 | Canola | nucleus | 31.88 | 29.82 |
| CDY42708 | Canola | nucleus | 31.88 | 29.82 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 31.25 | 29.76 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 31.25 | 28.9 |
| KRH69989 | Soybean | cytosol | 29.38 | 28.48 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 30.62 | 28.32 |
| CDX69254 | Canola | cytosol | 31.25 | 28.09 |
| Bra011715.1-P | Field mustard | nucleus | 30.62 | 28.0 |
| CDX75606 | Canola | nucleus | 30.62 | 28.0 |
| CDX89594 | Canola | cytosol | 28.12 | 27.61 |
| KRH08345 | Soybean | cytosol | 29.38 | 27.49 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 25.62 | 27.33 |
| AT2G23690.1 | Thale cress | cytosol | 27.5 | 26.99 |
| CDY39665 | Canola | cytosol | 27.5 | 26.99 |
| Bra032151.1-P | Field mustard | cytosol | 27.5 | 26.99 |
| Zm00001d020967_P001 | Maize | plastid | 39.38 | 26.92 |
| CDX76853 | Canola | cytosol | 27.5 | 26.83 |
| CDY46066 | Canola | cytosol | 26.88 | 26.38 |
| Zm00001d046687_P001 | Maize | plastid | 33.12 | 25.36 |
| Bra039208.1-P | Field mustard | cytosol | 21.25 | 24.46 |
| Zm00001d036787_P001 | Maize | plastid | 32.5 | 23.96 |
| Zm00001d015867_P001 | Maize | plastid | 30.62 | 22.9 |
| Zm00001d020968_P001 | Maize | plastid | 31.88 | 22.47 |
Protein Annotations
| EnsemblPlants:Zm00001d013311_P001 | EnsemblPlants:Zm00001d013311_T001 | EnsemblPlantsGene:Zm00001d013311 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF27 |
| PFAM:PF14009 | ProteinID:AQK63068.1 | SEG:seg | UniParc:UPI000845876F | UniProt:A0A1D6GHY8 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5:-:8316408..8316890
Molecular Weight (calculated)
15971.1 Da
IEP (calculated)
10.120
GRAVY (calculated)
0.048
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACTSREAT AVAAAPGSPA PEARVVLADG ALRRFPGGTR ASQAVKASAA SSAWFLCSAD GLELGGAAAA AVGPEEALQP GQLYFVLPAA MRRRPLRAEE
101: MAALAVRASA ALAGDGGGPL VFPEAAAGAR TAGKEACRKA RRGGRSRGRD FVPDLAAIAE
101: MAALAVRASA ALAGDGGGPL VFPEAAAGAR TAGKEACRKA RRGGRSRGRD FVPDLAAIAE
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.