Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90684 | Canola | cytosol, nucleus, plastid | 90.62 | 92.95 |
| CDY28982 | Canola | nucleus | 88.75 | 91.03 |
| CDX73789 | Canola | cytosol | 83.75 | 87.58 |
| CDX77946 | Canola | cytosol | 80.0 | 86.49 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 76.88 | 80.92 |
| CDY45243 | Canola | cytosol | 57.5 | 65.71 |
| CDY55087 | Canola | cytosol | 61.25 | 64.9 |
| CDX81387 | Canola | cytosol | 62.5 | 64.52 |
| CDY18612 | Canola | cytosol | 62.5 | 64.52 |
| CDY42708 | Canola | nucleus | 51.88 | 48.54 |
| CDX89594 | Canola | cytosol | 49.38 | 48.47 |
| CDY46066 | Canola | cytosol | 49.38 | 48.47 |
| CDY39665 | Canola | cytosol | 49.38 | 48.47 |
| CDX72612 | Canola | nucleus | 51.25 | 47.95 |
| CDX76853 | Canola | cytosol | 48.12 | 46.95 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 50.62 | 46.82 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 50.62 | 46.82 |
| CDX75606 | Canola | nucleus | 48.12 | 44.0 |
| CDX69254 | Canola | cytosol | 48.75 | 43.82 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 40.0 | 38.79 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 40.0 | 38.55 |
| Zm00001d013311_P001 | Maize | plastid | 33.12 | 33.12 |
| Os03t0740200-00 | Rice | plastid | 34.38 | 32.35 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 32.5 | 31.14 |
| TraesCS5A01G379900.1 | Wheat | plastid | 31.25 | 29.94 |
| TraesCS5D01G389400.1 | Wheat | plastid | 31.25 | 29.59 |
| Zm00001d033943_P001 | Maize | plastid | 30.62 | 29.52 |
| TraesCS5B01G383500.1 | Wheat | plastid | 31.25 | 29.07 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 33.75 | 28.72 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 33.75 | 28.72 |
| TraesCS2A01G266000.1 | Wheat | plastid | 34.38 | 28.65 |
| TraesCS2D01G257800.1 | Wheat | plastid | 34.38 | 28.65 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 33.12 | 28.19 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 31.25 | 27.93 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 28.75 | 27.88 |
| Os03t0768900-00 | Rice | cytosol | 30.62 | 27.84 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 32.5 | 27.81 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 29.38 | 27.49 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 31.88 | 27.42 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 32.5 | 27.37 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 30.0 | 27.27 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 30.0 | 27.27 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 30.0 | 27.27 |
| TraesCS1A01G436400.1 | Wheat | plastid | 31.88 | 26.98 |
| Zm00001d034190_P001 | Maize | cytosol | 30.62 | 26.92 |
| HORVU2Hr1G061800.1 | Barley | plastid | 31.88 | 26.84 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 29.38 | 26.7 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 29.38 | 26.7 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 29.38 | 26.7 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 30.62 | 26.63 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 30.62 | 26.49 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 30.62 | 26.34 |
| EER95817 | Sorghum | nucleus | 31.88 | 26.29 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 29.38 | 26.26 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 28.75 | 26.14 |
| EER93387 | Sorghum | cytosol | 30.62 | 26.06 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 28.75 | 25.7 |
| Os07t0123100-00 | Rice | extracellular | 31.88 | 24.88 |
| Zm00001d013178_P001 | Maize | cytosol | 28.75 | 24.73 |
| HORVU5Hr1G093900.1 | Barley | plastid | 26.88 | 24.57 |
| Zm00001d018717_P001 | Maize | cytosol | 29.38 | 24.23 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 31.88 | 23.83 |
| CDY33663 | Canola | cytosol | 30.0 | 23.19 |
| CDY20399 | Canola | nucleus, plastid | 30.62 | 23.0 |
| CDX96609 | Canola | cytosol | 30.0 | 22.86 |
| CDY01339 | Canola | nucleus | 29.38 | 22.71 |
| CDY00357 | Canola | nucleus | 29.38 | 22.71 |
| CDY45978 | Canola | nucleus | 30.0 | 22.64 |
| CDX85960 | Canola | cytosol | 29.38 | 22.6 |
| CDX68092 | Canola | cytosol, plastid | 29.38 | 22.38 |
| Zm00001d007974_P001 | Maize | nucleus | 26.88 | 22.28 |
| TraesCS5A01G403900.1 | Wheat | plastid | 29.38 | 20.17 |
| CDY04592 | Canola | plastid | 30.0 | 19.92 |
| CDY29485 | Canola | plastid | 30.0 | 19.83 |
| CDY06423 | Canola | cytosol | 18.75 | 18.63 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 18.75 | 15.15 |
Protein Annotations
| EnsemblPlants:CDY28078 | EnsemblPlantsGene:GSBRNA2T00039029001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDY28078 | ProteinID:CDY28078.1 | SEG:seg | UniParc:UPI0004EEDA81 | UniProt:A0A078GTW9 | MapMan:35.2 |
Description
BnaC06g02590DBnaC06g02590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTW9]
Coordinates
chrLK032214:+:20555..25719
Molecular Weight (calculated)
17069.2 Da
IEP (calculated)
8.373
GRAVY (calculated)
-0.365
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MGACGSSESR RTDTAKLILP DGALHEFTSP VKVWQIFQKN PTSFVCNSDD MDFDDAVIAV GGSEDLRPGE LYFVLPLTWL KYPLRAEQMA ALAVKGSSAL
101: TKSGWSCGDD GDARKVSGGD VNGNCSRVKR VKRNSCGGRG CGSGGKGRRK FTVELSSIAE
101: TKSGWSCGDD GDARKVSGGD VNGNCSRVKR VKRNSCGGRG CGSGGKGRRK FTVELSSIAE
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.