Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 86.02 | 86.49 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 82.8 | 82.8 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 80.65 | 79.79 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 81.18 | 79.47 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 78.49 | 78.07 |
| TraesCS2D01G257800.1 | Wheat | plastid | 76.88 | 74.48 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 53.23 | 56.25 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 53.23 | 56.25 |
| Os07t0123100-00 | Rice | extracellular | 61.83 | 56.1 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 53.23 | 55.31 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 51.61 | 53.63 |
| Zm00001d018717_P001 | Maize | cytosol | 53.23 | 51.03 |
| EER95817 | Sorghum | nucleus | 51.61 | 49.48 |
| Zm00001d007974_P001 | Maize | nucleus | 48.92 | 47.15 |
| TraesCS5D01G389400.1 | Wheat | plastid | 38.17 | 42.01 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 33.87 | 37.95 |
| CDY45243 | Canola | cytosol | 27.96 | 37.14 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 32.26 | 36.36 |
| CDX77946 | Canola | cytosol | 28.49 | 35.81 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 27.42 | 35.17 |
| Bra036862.1-P | Field mustard | cytosol | 27.96 | 35.14 |
| Bra012084.1-P | Field mustard | cytosol | 26.34 | 35.0 |
| CDX81387 | Canola | cytosol | 29.03 | 34.84 |
| CDX73789 | Canola | cytosol | 28.49 | 34.64 |
| Solyc03g044860.1.1 | Tomato | cytosol | 26.88 | 34.25 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 27.96 | 34.21 |
| Solyc02g089990.1.1 | Tomato | nucleus | 29.57 | 34.16 |
| CDY28982 | Canola | nucleus | 28.49 | 33.97 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 29.57 | 33.95 |
| Bra031814.1-P | Field mustard | cytosol | 27.42 | 33.77 |
| CDY55087 | Canola | cytosol | 27.42 | 33.77 |
| VIT_00s0207g00140.t01 | Wine grape | cytosol | 29.57 | 33.74 |
| Bra037163.1-P | Field mustard | cytosol | 27.96 | 33.55 |
| CDY18612 | Canola | cytosol | 27.96 | 33.55 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 27.96 | 33.33 |
| Bra012887.1-P | Field mustard | cytosol, nucleus, plastid | 27.96 | 33.33 |
| AT5G66580.1 | Thale cress | cytosol | 27.96 | 33.33 |
| VIT_00s0207g00180.t01 | Wine grape | cytosol | 29.03 | 33.13 |
| Bra017789.1-P | Field mustard | nucleus | 30.11 | 32.75 |
| CDX72612 | Canola | nucleus | 30.11 | 32.75 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 29.57 | 32.74 |
| TraesCS6D01G158200.1 | Wheat | plastid | 18.82 | 32.71 |
| PGSC0003DMT400007187 | Potato | cytosol | 26.34 | 32.24 |
| Solyc02g065430.1.1 | Tomato | cytosol | 26.34 | 32.24 |
| CDY42708 | Canola | nucleus | 29.57 | 32.16 |
| KRH76906 | Soybean | cytosol | 27.42 | 32.08 |
| KRH28562 | Soybean | cytosol | 27.96 | 31.9 |
| CDY28078 | Canola | cytosol | 27.42 | 31.88 |
| KRH69989 | Soybean | cytosol | 27.42 | 30.91 |
| CDY46066 | Canola | cytosol | 26.88 | 30.67 |
| Bra032151.1-P | Field mustard | cytosol | 26.88 | 30.67 |
| CDY39665 | Canola | cytosol | 26.88 | 30.67 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 28.49 | 30.64 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 28.49 | 30.64 |
| CDX76853 | Canola | cytosol | 26.88 | 30.49 |
| KRH08345 | Soybean | cytosol | 27.96 | 30.41 |
| Bra039208.1-P | Field mustard | cytosol | 22.58 | 30.22 |
| AT2G23690.1 | Thale cress | cytosol | 26.34 | 30.06 |
| CDX89594 | Canola | cytosol | 26.34 | 30.06 |
| Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 24.19 | 30.0 |
| TraesCS7D01G390000.1 | Wheat | plastid | 31.18 | 29.59 |
| CDX69254 | Canola | cytosol | 27.96 | 29.21 |
| Bra011715.1-P | Field mustard | nucleus | 27.42 | 29.14 |
| CDX75606 | Canola | nucleus | 27.42 | 29.14 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 30.11 | 28.57 |
| TraesCS5D01G278000.1 | Wheat | plastid | 29.57 | 28.5 |
| TraesCS6D01G158000.1 | Wheat | plastid | 28.49 | 27.75 |
| TraesCS6D01G157700.1 | Wheat | plastid | 29.03 | 27.55 |
| TraesCS6D01G158100.1 | Wheat | plastid | 26.88 | 27.03 |
| TraesCS6D01G157600.1 | Wheat | plastid | 27.42 | 26.84 |
| TraesCS5D01G278100.1 | Wheat | plastid | 31.18 | 26.73 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 24.73 | 26.44 |
| TraesCS5D01G278200.1 | Wheat | plastid | 31.18 | 26.24 |
| TraesCS7D01G390100.1 | Wheat | plastid | 31.18 | 24.27 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G444800.1 | EnsemblPlantsGene:TraesCS1D01G444800 | InterPro:DUF4228_plant | ncoils:Coil | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF62 |
| PFAM:PF14009 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1D:+:487883711..487884271
Molecular Weight (calculated)
19601.6 Da
IEP (calculated)
8.979
GRAVY (calculated)
0.000
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLCMSSGSA AAAAAVLAKE QPASTAMVLL PVGELREYPR PATAGQALDD LVAGDAGWFL CDADEMGFDA RVAAVPQAEE LRPGQIYFVL PAEVRRNGLR
101: REDLAALAVR ASAALVNKAN TASCAGRRWR RASSVAPLVF APPQEAIPYK TVSALAAKRR PVARAKSAGR MQPRFAPDLS AIPECE
101: REDLAALAVR ASAALVNKAN TASCAGRRWR RASSVAPLVF APPQEAIPYK TVSALAAKRR PVARAKSAGR MQPRFAPDLS AIPECE
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.