Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 1
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH28562 | Soybean | cytosol | 88.68 | 86.5 |
VIT_00s0207g00180.t01 | Wine grape | cytosol | 67.92 | 66.26 |
VIT_00s0207g00140.t01 | Wine grape | cytosol | 67.3 | 65.64 |
Solyc02g089990.1.1 | Tomato | nucleus | 59.75 | 59.01 |
PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 59.75 | 58.64 |
Solyc03g044860.1.1 | Tomato | cytosol | 52.2 | 56.85 |
PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 51.57 | 56.55 |
CDY39665 | Canola | cytosol | 57.86 | 56.44 |
Bra032151.1-P | Field mustard | cytosol | 57.86 | 56.44 |
PGSC0003DMT400007187 | Potato | cytosol | 52.83 | 55.26 |
AT2G23690.1 | Thale cress | cytosol | 56.6 | 55.21 |
KRH69989 | Soybean | cytosol | 57.23 | 55.15 |
CDX89594 | Canola | cytosol | 55.97 | 54.6 |
Solyc02g065430.1.1 | Tomato | cytosol | 51.57 | 53.95 |
CDY46066 | Canola | cytosol | 54.72 | 53.37 |
CDX76853 | Canola | cytosol | 54.72 | 53.05 |
Bra017789.1-P | Field mustard | nucleus | 55.35 | 51.46 |
KRH08345 | Soybean | cytosol | 55.35 | 51.46 |
AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 54.09 | 51.19 |
CDX72612 | Canola | nucleus | 54.72 | 50.88 |
CDY42708 | Canola | nucleus | 54.72 | 50.88 |
CDY22462 | Canola | cytosol, nucleus, plastid | 55.35 | 50.87 |
GSMUA_Achr2P08730_001 | Banana | cytosol | 52.83 | 50.6 |
CDY24764 | Canola | cytosol, nucleus, plastid | 54.09 | 49.71 |
Bra039208.1-P | Field mustard | cytosol | 42.77 | 48.92 |
GSMUA_Achr7P27420_001 | Banana | cytosol | 50.31 | 48.48 |
Bra011715.1-P | Field mustard | nucleus | 51.57 | 46.86 |
CDX75606 | Canola | nucleus | 51.57 | 46.86 |
CDX69254 | Canola | cytosol | 52.2 | 46.63 |
Bra010578.1-P | Field mustard | cytosol, nucleus, plastid | 42.77 | 45.33 |
TraesCS5A01G379900.1 | Wheat | plastid | 34.59 | 32.93 |
TraesCS5D01G389400.1 | Wheat | plastid | 34.59 | 32.54 |
Zm00001d013311_P001 | Maize | plastid | 32.7 | 32.5 |
TraesCS5B01G383500.1 | Wheat | plastid | 34.59 | 31.98 |
TraesCS5A01G404100.1 | Wheat | cytosol | 35.22 | 31.82 |
TraesCS5A01G404200.1 | Wheat | cytosol | 35.22 | 31.82 |
HORVU5Hr1G098280.1 | Barley | cytosol | 35.22 | 31.82 |
Os03t0740200-00 | Rice | plastid | 33.96 | 31.76 |
Zm00001d033943_P001 | Maize | plastid | 32.7 | 31.33 |
TraesCS5A01G404000.1 | Wheat | cytosol | 35.22 | 31.28 |
TraesCS5D01G414000.1 | Wheat | cytosol | 35.22 | 31.28 |
HORVU5Hr1G098290.1 | Barley | cytosol | 34.59 | 31.25 |
TraesCS5D01G414300.1 | Wheat | cytosol | 34.59 | 31.25 |
TraesCS5D01G414200.1 | Wheat | cytosol | 34.59 | 31.25 |
TraesCS5B01G408800.1 | Wheat | cytosol | 34.59 | 31.25 |
Os03t0768900-00 | Rice | cytosol | 34.59 | 31.25 |
KXG37596 | Sorghum | cytosol, nucleus, plastid | 32.7 | 31.14 |
TraesCS5D01G414100.1 | Wheat | cytosol | 34.59 | 30.73 |
TraesCS5B01G408700.1 | Wheat | cytosol | 35.22 | 30.43 |
TraesCS5B01G409000.1 | Wheat | cytosol | 32.7 | 30.41 |
Zm00001d034190_P001 | Maize | cytosol | 34.59 | 30.22 |
EER93387 | Sorghum | cytosol | 35.22 | 29.79 |
Zm00001d013178_P001 | Maize | cytosol | 34.59 | 29.57 |
HORVU5Hr1G093900.1 | Barley | plastid | 32.08 | 29.14 |
TraesCS1A01G436400.1 | Wheat | plastid | 33.96 | 28.57 |
TraesCS1A01G436300.1 | Wheat | mitochondrion | 33.96 | 28.42 |
HORVU1Hr1G094330.1 | Barley | cytosol | 33.33 | 28.34 |
TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 32.7 | 27.96 |
TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 32.7 | 27.66 |
TraesCS2D01G257800.1 | Wheat | plastid | 33.33 | 27.6 |
TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 32.08 | 27.42 |
TraesCS2A01G266000.1 | Wheat | plastid | 32.7 | 27.08 |
TraesCS1B01G471500.1 | Wheat | mitochondrion | 31.45 | 27.03 |
HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 35.85 | 26.64 |
TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 31.45 | 26.6 |
HORVU2Hr1G061800.1 | Barley | plastid | 31.45 | 26.32 |
TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 30.82 | 26.06 |
KRH24527 | Soybean | cytosol | 23.27 | 25.87 |
KRH29531 | Soybean | cytosol | 23.27 | 25.69 |
TraesCS2A01G266100.1 | Wheat | cytosol | 26.42 | 25.45 |
EER95817 | Sorghum | nucleus | 30.82 | 25.26 |
Os07t0123100-00 | Rice | extracellular | 31.45 | 24.39 |
KRH76905 | Soybean | plastid | 22.01 | 23.97 |
Zm00001d018717_P001 | Maize | cytosol | 28.93 | 23.71 |
TraesCS5A01G403900.1 | Wheat | plastid | 33.96 | 23.18 |
KRH28563 | Soybean | plastid | 21.38 | 23.13 |
Zm00001d007974_P001 | Maize | nucleus | 24.53 | 20.21 |
HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 23.27 | 18.69 |
Protein Annotations
EMBL:ACUP02000646 | EnsemblPlants:KRH76906 | EnsemblPlantsGene:GLYMA_01G180500 | EntrezGene:100787837 | InterPro:DUF4228_plant | PANTHER:PTHR33052 |
PANTHER:PTHR33052:SF17 | PFAM:PF14009 | ProteinID:KRH76906 | ProteinID:KRH76906.1 | SEG:seg | UniParc:UPI00023376C2 |
UniProt:I1J913 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:51685181..51686112
Molecular Weight (calculated)
16957.3 Da
IEP (calculated)
8.320
GRAVY (calculated)
-0.175
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCSSSDST QVATAKLVLQ DGRLQEFSYP VKVSFLLQKY PACFICNSDE MEFGDVVSAI DEDQVLQPGQ LYFALPLSRL RHPLQPHEMA ALAVKASSAL
101: MKTADKCGSR RKQILFSNEY DSNPKRVSPA LAAGGGRGRT TAGAGGKGGF AALLSSIPE
101: MKTADKCGSR RKQILFSNEY DSNPKRVSPA LAAGGGRGRT TAGAGGKGGF AALLSSIPE
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.