Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032151.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX89594 | Canola | cytosol | 95.71 | 95.71 |
| AT2G23690.1 | Thale cress | cytosol | 93.25 | 93.25 |
| CDY46066 | Canola | cytosol | 89.57 | 89.57 |
| CDX76853 | Canola | cytosol | 88.34 | 87.8 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 71.17 | 67.05 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 70.55 | 66.47 |
| CDX72612 | Canola | nucleus | 69.33 | 66.08 |
| CDY42708 | Canola | nucleus | 69.33 | 66.08 |
| CDX75606 | Canola | nucleus | 68.1 | 63.43 |
| CDX69254 | Canola | cytosol | 68.71 | 62.92 |
| Solyc02g089990.1.1 | Tomato | nucleus | 58.28 | 59.01 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 57.67 | 58.02 |
| KRH76906 | Soybean | cytosol | 56.44 | 57.86 |
| Solyc03g044860.1.1 | Tomato | cytosol | 50.31 | 56.16 |
| PGSC0003DMT400007187 | Potato | cytosol | 50.92 | 54.61 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 48.47 | 54.48 |
| KRH28562 | Soybean | cytosol | 53.99 | 53.99 |
| Solyc02g065430.1.1 | Tomato | cytosol | 49.69 | 53.29 |
| CDY45243 | Canola | cytosol | 45.4 | 52.86 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 50.31 | 52.56 |
| CDX73789 | Canola | cytosol | 49.08 | 52.29 |
| CDX77946 | Canola | cytosol | 47.24 | 52.03 |
| CDY55087 | Canola | cytosol | 47.85 | 51.66 |
| CDY28982 | Canola | nucleus | 49.08 | 51.28 |
| CDY18612 | Canola | cytosol | 47.85 | 50.32 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 53.37 | 50.0 |
| CDX81387 | Canola | cytosol | 47.24 | 49.68 |
| CDY28078 | Canola | cytosol | 48.47 | 49.38 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 49.08 | 48.19 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 47.85 | 47.27 |
| KRH69989 | Soybean | cytosol | 47.85 | 47.27 |
| KRH08345 | Soybean | cytosol | 47.85 | 45.61 |
| Os03t0740200-00 | Rice | plastid | 31.29 | 30.0 |
| TraesCS5A01G379900.1 | Wheat | plastid | 30.67 | 29.94 |
| Zm00001d034190_P001 | Maize | cytosol | 33.13 | 29.67 |
| TraesCS5D01G389400.1 | Wheat | plastid | 30.67 | 29.59 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 31.9 | 29.55 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 31.9 | 29.55 |
| TraesCS5B01G383500.1 | Wheat | plastid | 30.67 | 29.07 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 31.9 | 29.05 |
| CDY01339 | Canola | nucleus | 36.81 | 28.99 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 31.29 | 28.98 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 31.29 | 28.98 |
| Os03t0768900-00 | Rice | cytosol | 31.29 | 28.98 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 33.13 | 28.42 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 30.67 | 28.41 |
| EER93387 | Sorghum | cytosol | 32.52 | 28.19 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 30.67 | 27.93 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 30.06 | 27.84 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 30.06 | 27.84 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 31.9 | 27.81 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 31.29 | 27.72 |
| CDX96609 | Canola | cytosol | 35.58 | 27.62 |
| CDY33663 | Canola | cytosol | 34.97 | 27.54 |
| Zm00001d013311_P001 | Maize | plastid | 26.99 | 27.5 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 28.83 | 27.49 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 31.29 | 27.42 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 30.06 | 27.37 |
| CDY20399 | Canola | nucleus, plastid | 35.58 | 27.23 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 31.29 | 27.13 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 31.29 | 27.13 |
| TraesCS2D01G257800.1 | Wheat | plastid | 31.9 | 27.08 |
| CDY00357 | Canola | nucleus | 34.36 | 27.05 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 30.67 | 27.03 |
| TraesCS1A01G436400.1 | Wheat | plastid | 31.29 | 26.98 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 27.61 | 26.95 |
| CDX85960 | Canola | cytosol | 34.36 | 26.92 |
| Zm00001d013178_P001 | Maize | cytosol | 30.67 | 26.88 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 30.67 | 26.88 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 26.99 | 26.67 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 30.67 | 26.6 |
| TraesCS2A01G266000.1 | Wheat | plastid | 31.29 | 26.56 |
| Zm00001d033943_P001 | Maize | plastid | 26.99 | 26.51 |
| CDY45978 | Canola | nucleus | 34.36 | 26.42 |
| EER95817 | Sorghum | nucleus | 31.29 | 26.29 |
| Os07t0123100-00 | Rice | extracellular | 32.52 | 25.85 |
| HORVU5Hr1G093900.1 | Barley | plastid | 27.61 | 25.71 |
| CDX68092 | Canola | cytosol, plastid | 33.13 | 25.71 |
| HORVU2Hr1G061800.1 | Barley | plastid | 29.45 | 25.26 |
| Zm00001d018717_P001 | Maize | cytosol | 30.06 | 25.26 |
| CDY29485 | Canola | plastid | 36.81 | 24.79 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 32.52 | 24.77 |
| CDY04592 | Canola | plastid | 36.2 | 24.48 |
| Zm00001d007974_P001 | Maize | nucleus | 28.22 | 23.83 |
| CDY06423 | Canola | cytosol | 22.7 | 22.98 |
| TraesCS5A01G403900.1 | Wheat | plastid | 32.52 | 22.75 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 20.86 | 17.17 |
Protein Annotations
| EnsemblPlants:CDY39665 | EnsemblPlantsGene:GSBRNA2T00068243001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDY39665 | ProteinID:CDY39665.1 | SEG:seg | UniParc:UPI00025447B9 | UniProt:A0A078HMC9 | MapMan:35.2 |
Description
BnaA04g13820DBnaA04g13820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMC9]
Coordinates
chrLK032454:+:32884..33375
Molecular Weight (calculated)
17727.5 Da
IEP (calculated)
9.115
GRAVY (calculated)
-0.287
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICMSYEST QVATAKLILQ DGRMMEFTTP VKVGYVLQKN PMCFICNSDD MDFDDVVSAI SADEELQLGQ LYFALPLSSL HQSLKPEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AAGSNGQTRN GKRRGGGGSG RRKYEAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AAGSNGQTRN GKRRGGGGSG RRKYEAKLSK IEE
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.