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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • vacuole 1
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012887.1-P Field mustard cytosol, nucleus, plastid 100.0 100.0
CDY28982 Canola nucleus 96.15 96.15
CDX73789 Canola cytosol 89.1 90.85
CDY28078 Canola cytosol 92.95 90.62
CDX77946 Canola cytosol 85.26 89.86
AT3G50800.1 Thale cress cytosol, nucleus, plastid 82.05 84.21
CDY45243 Canola cytosol 62.18 69.29
CDY18612 Canola cytosol 66.67 67.1
CDX81387 Canola cytosol 66.67 67.1
CDY55087 Canola cytosol 64.74 66.89
CDX89594 Canola cytosol 52.56 50.31
CDY39665 Canola cytosol 52.56 50.31
CDY42708 Canola nucleus 55.13 50.29
CDX72612 Canola nucleus 54.49 49.71
CDY46066 Canola cytosol 51.28 49.08
CDY24764 Canola cytosol, nucleus, plastid 53.85 48.55
CDY22462 Canola cytosol, nucleus, plastid 53.85 48.55
CDX76853 Canola cytosol 50.0 47.56
CDX75606 Canola nucleus 51.28 45.71
CDX69254 Canola cytosol 51.92 45.51
GSMUA_Achr7P27420_001 Banana cytosol 43.59 41.21
GSMUA_Achr2P08730_001 Banana cytosol 43.59 40.96
Zm00001d013311_P001 Maize plastid 33.97 33.12
Os03t0740200-00 Rice plastid 35.26 32.35
KXG37596 Sorghum cytosol, nucleus, plastid 33.33 31.14
TraesCS5A01G379900.1 Wheat plastid 33.33 31.14
TraesCS5D01G389400.1 Wheat plastid 33.33 30.77
TraesCS5B01G383500.1 Wheat plastid 33.33 30.23
Zm00001d033943_P001 Maize plastid 31.41 29.52
TraesCS2B01G276100.1 Wheat cytosol, extracellular, plastid 35.26 29.26
TraesCS2A01G266000.1 Wheat plastid 35.9 29.17
TraesCS2D01G257800.1 Wheat plastid 35.9 29.17
TraesCS2D01G257700.1 Wheat mitochondrion, nucleus, plastid 34.62 28.72
TraesCS5D01G414100.1 Wheat cytosol 32.69 28.49
Os03t0768900-00 Rice cytosol 32.05 28.41
HORVU1Hr1G094330.1 Barley cytosol 33.97 28.34
TraesCS2B01G276000.1 Wheat cytosol, nucleus, plastid 33.97 28.19
TraesCS5B01G409000.1 Wheat cytosol 30.77 28.07
TraesCS1A01G436400.1 Wheat plastid 33.97 28.04
TraesCS1D01G444800.1 Wheat cytosol, plastid 33.33 27.96
TraesCS1A01G436300.1 Wheat mitochondrion 33.97 27.89
TraesCS2A01G266100.1 Wheat cytosol 29.49 27.88
TraesCS5D01G414200.1 Wheat cytosol 31.41 27.84
TraesCS5D01G414300.1 Wheat cytosol 31.41 27.84
Zm00001d034190_P001 Maize cytosol 32.05 27.47
EER95817 Sorghum nucleus 33.97 27.32
HORVU5Hr1G098290.1 Barley cytosol 30.77 27.27
TraesCS5A01G404200.1 Wheat cytosol 30.77 27.27
TraesCS5A01G404100.1 Wheat cytosol 30.77 27.27
HORVU5Hr1G098280.1 Barley cytosol 30.77 27.27
TraesCS5B01G408700.1 Wheat cytosol 32.05 27.17
TraesCS1B01G471500.1 Wheat mitochondrion 32.05 27.03
TraesCS1D01G444700.1 Wheat cytosol, extracellular, peroxisome, plastid 32.05 26.88
HORVU2Hr1G061800.1 Barley plastid 32.69 26.84
TraesCS5A01G404000.1 Wheat cytosol 30.77 26.82
TraesCS5B01G408800.1 Wheat cytosol 30.13 26.7
EER93387 Sorghum cytosol 32.05 26.6
TraesCS5D01G414000.1 Wheat cytosol 30.13 26.26
HORVU5Hr1G093900.1 Barley plastid 28.85 25.71
Os07t0123100-00 Rice extracellular 33.33 25.37
Zm00001d013178_P001 Maize cytosol 30.13 25.27
Zm00001d018717_P001 Maize cytosol 30.77 24.74
HORVU5Hr1G098260.1 Barley cytosol, mitochondrion 33.33 24.3
CDY33663 Canola cytosol 32.05 24.15
CDX96609 Canola cytosol 32.05 23.81
CDY01339 Canola nucleus 31.41 23.67
CDY00357 Canola nucleus 31.41 23.67
CDY20399 Canola nucleus, plastid 32.05 23.47
Zm00001d007974_P001 Maize nucleus 28.85 23.32
CDY45978 Canola nucleus 31.41 23.11
CDX85960 Canola cytosol 30.77 23.08
CDX68092 Canola cytosol, plastid 30.77 22.86
CDY04592 Canola plastid 32.05 20.75
CDY29485 Canola plastid 32.05 20.66
TraesCS5A01G403900.1 Wheat plastid 30.77 20.6
CDY06423 Canola cytosol 19.23 18.63
HORVU2Hr1G061850.1 Barley extracellular, plastid 20.51 16.16
Protein Annotations
EnsemblPlants:CDX90684EnsemblPlantsGene:GSBRNA2T00151349001InterPro:DUF4228_plantPANTHER:PTHR33052PANTHER:PTHR33052:SF17PFAM:PF14009
ProteinID:CDX90684ProteinID:CDX90684.1SEG:segUniParc:UPI000254065FMapMan:35.2:
Description
BnaA03g40970D
Coordinates
chrLK031863:+:1537916..1538386
Molecular Weight (calculated)
16643.7 Da
IEP (calculated)
8.114
GRAVY (calculated)
-0.386
Length
156 amino acids
Sequence
(BLAST)
001: MGACGSSESR RTDTAKLILQ DGTLQEFTSP VKVWQILQKN PTSFVCNSDD MDFDDAVIAV GGSEDLRPGE LYFVLPLTWL NHPLRAEQMA ALAVKASSAL
101: NKSGWSCGDD GDARKVSGGE CGRVKRVKRN SCGGRGCGGG GKGRRKFTVE LSSIAE
Best Arabidopsis Sequence Match ( AT3G50800.1 )
(BLAST)
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
Arabidopsis Description
Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.