CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036862.1-P	Field mustard	cytosol	98.65	98.65
CDX73789	Canola	cytosol	96.62	93.46
CDX90684	Canola	cytosol, nucleus, plastid	89.86	85.26
CDY28982	Canola	nucleus	88.51	83.97
AT3G50800.1	Thale cress	cytosol, nucleus, plastid	83.11	80.92
CDY28078	Canola	cytosol	86.49	80.0
CDY45243	Canola	cytosol	64.19	67.86
CDX81387	Canola	cytosol	66.89	63.87
CDY18612	Canola	cytosol	66.89	63.87
CDY55087	Canola	cytosol	64.86	63.58
CDY42708	Canola	nucleus	56.08	48.54
CDX72612	Canola	nucleus	56.08	48.54
CDY46066	Canola	cytosol	52.7	47.85
CDX89594	Canola	cytosol	52.7	47.85
CDY24764	Canola	cytosol, nucleus, plastid	55.41	47.4
CDY22462	Canola	cytosol, nucleus, plastid	55.41	47.4
CDY39665	Canola	cytosol	52.03	47.24
CDX76853	Canola	cytosol	51.35	46.34
CDX75606	Canola	nucleus	51.35	43.43
CDX69254	Canola	cytosol	52.03	43.26
GSMUA_Achr7P27420_001	Banana	cytosol	46.62	41.82
GSMUA_Achr2P08730_001	Banana	cytosol	45.95	40.96
Zm00001d013311_P001	Maize	plastid	35.14	32.5
Os03t0740200-00	Rice	plastid	36.49	31.76
KXG37596	Sorghum	cytosol, nucleus, plastid	34.46	30.54
TraesCS5A01G379900.1	Wheat	plastid	34.46	30.54
TraesCS5D01G389400.1	Wheat	plastid	34.46	30.18
TraesCS2B01G276100.1	Wheat	cytosol, extracellular, plastid	37.84	29.79
TraesCS2D01G257800.1	Wheat	plastid	38.51	29.69
TraesCS2A01G266000.1	Wheat	plastid	38.51	29.69
TraesCS5B01G383500.1	Wheat	plastid	34.46	29.65
Os03t0768900-00	Rice	cytosol	35.14	29.55
TraesCS5D01G414100.1	Wheat	cytosol	35.14	29.05
Zm00001d033943_P001	Maize	plastid	32.43	28.92
TraesCS2D01G257700.1	Wheat	mitochondrion, nucleus, plastid	36.49	28.72
TraesCS5B01G409000.1	Wheat	cytosol	33.11	28.66
TraesCS1A01G436400.1	Wheat	plastid	36.49	28.57
TraesCS1D01G444800.1	Wheat	cytosol, plastid	35.81	28.49
TraesCS1A01G436300.1	Wheat	mitochondrion	36.49	28.42
HORVU5Hr1G098290.1	Barley	cytosol	33.78	28.41
TraesCS5D01G414300.1	Wheat	cytosol	33.78	28.41
TraesCS5D01G414200.1	Wheat	cytosol	33.78	28.41
HORVU1Hr1G094330.1	Barley	cytosol	35.81	28.34
TraesCS2B01G276000.1	Wheat	cytosol, nucleus, plastid	35.81	28.19
TraesCS1B01G471500.1	Wheat	mitochondrion	35.14	28.11
TraesCS5A01G404000.1	Wheat	cytosol	33.78	27.93
TraesCS2A01G266100.1	Wheat	cytosol	31.08	27.88
TraesCS5A01G404200.1	Wheat	cytosol	33.11	27.84
HORVU5Hr1G098280.1	Barley	cytosol	33.11	27.84
TraesCS5A01G404100.1	Wheat	cytosol	33.11	27.84
TraesCS5B01G408700.1	Wheat	cytosol	34.46	27.72
Zm00001d034190_P001	Maize	cytosol	33.78	27.47
TraesCS1D01G444700.1	Wheat	cytosol, extracellular, peroxisome, plastid	34.46	27.42
TraesCS5D01G414000.1	Wheat	cytosol	33.11	27.37
HORVU2Hr1G061800.1	Barley	plastid	35.14	27.37
TraesCS5B01G408800.1	Wheat	cytosol	32.43	27.27
EER93387	Sorghum	cytosol	33.78	26.6
EER95817	Sorghum	nucleus	34.46	26.29
Os07t0123100-00	Rice	extracellular	35.81	25.85
HORVU5Hr1G093900.1	Barley	plastid	30.41	25.71
Zm00001d013178_P001	Maize	cytosol	31.76	25.27
HORVU5Hr1G098260.1	Barley	cytosol, mitochondrion	35.81	24.77
Zm00001d018717_P001	Maize	cytosol	32.43	24.74
CDY33663	Canola	cytosol	33.78	24.15
CDY01339	Canola	nucleus	33.78	24.15
CDY00357	Canola	nucleus	33.78	24.15
CDY20399	Canola	nucleus, plastid	34.46	23.94
CDX96609	Canola	cytosol	33.78	23.81
CDY45978	Canola	nucleus	33.78	23.58
CDX85960	Canola	cytosol	33.11	23.56
CDX68092	Canola	cytosol, plastid	33.11	23.33
Zm00001d007974_P001	Maize	nucleus	29.73	22.8
TraesCS5A01G403900.1	Wheat	plastid	33.78	21.46
CDY04592	Canola	plastid	34.46	21.16
CDY29485	Canola	plastid	34.46	21.07
CDY06423	Canola	cytosol	20.95	19.25
HORVU2Hr1G061850.1	Barley	extracellular, plastid	22.3	16.67

Protein Annotations

EnsemblPlants:CDX77946	EnsemblPlantsGene:GSBRNA2T00129207001	InterPro:DUF4228_plant	PANTHER:PTHR33052	PANTHER:PTHR33052:SF17	PFAM:PF14009
ProteinID:CDX77946	ProteinID:CDX77946.1	SEG:seg	UniParc:UPI0004EF16E7	MapMan:35.2	:

Description

BnaA09g31410D

Coordinates

chrLK031814:-:219297..219743

Molecular Weight (calculated)

16106.1 Da

IEP (calculated)

8.217

GRAVY (calculated)

-0.386

Length

148 amino acids

Sequence
(BLAST)

001: MGACSSSESR RTETAKLILP DGTLQEFSSP VKVWQILQKN PTSFVCNSDD MDFDDAVVAV GGSEDLRPGE LYFVLPLTWL NHPLRAEQMA ALAVKASSAL
101: TKSGWSCGHE GEGRRVSGGE CRVKRVNRKG CGGRGRRKFT VELSSITE

Best Arabidopsis Sequence Match ( AT3G50800.1 )
(BLAST)

001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE

Arabidopsis Description

Uncharacterized protein At3g50800 [Source:UniProtKB/TrEMBL;Acc:Q9SVL8]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.