Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46066 | Canola | cytosol | 93.9 | 94.48 |
| CDY39665 | Canola | cytosol | 87.8 | 88.34 |
| CDX89594 | Canola | cytosol | 85.98 | 86.5 |
| AT2G23690.1 | Thale cress | cytosol | 85.37 | 85.89 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 68.29 | 64.74 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 67.68 | 64.16 |
| CDX72612 | Canola | nucleus | 66.46 | 63.74 |
| CDY42708 | Canola | nucleus | 65.85 | 63.16 |
| CDX75606 | Canola | nucleus | 65.85 | 61.71 |
| CDX69254 | Canola | cytosol | 65.85 | 60.67 |
| Solyc03g044860.1.1 | Tomato | cytosol | 50.0 | 56.16 |
| Solyc02g089990.1.1 | Tomato | nucleus | 54.27 | 55.28 |
| KRH76906 | Soybean | cytosol | 53.05 | 54.72 |
| PGSC0003DMT400007187 | Potato | cytosol | 50.61 | 54.61 |
| PGSC0003DMT400026013 | Potato | cytosol, nucleus, plastid | 53.66 | 54.32 |
| PGSC0003DMT400059007 | Potato | cytosol, nucleus, plastid | 47.56 | 53.79 |
| Solyc02g065430.1.1 | Tomato | cytosol | 49.39 | 53.29 |
| CDX77946 | Canola | cytosol | 46.34 | 51.35 |
| VIT_03s0063g01940.t01 | Wine grape | cytosol | 54.27 | 51.15 |
| CDX73789 | Canola | cytosol | 47.56 | 50.98 |
| KRH28562 | Soybean | cytosol | 50.61 | 50.92 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 47.56 | 50.0 |
| CDY55087 | Canola | cytosol | 45.73 | 49.67 |
| CDY45243 | Canola | cytosol | 42.07 | 49.29 |
| CDY28982 | Canola | nucleus | 46.34 | 48.72 |
| CDY28078 | Canola | cytosol | 46.95 | 48.12 |
| CDY18612 | Canola | cytosol | 45.12 | 47.74 |
| CDX81387 | Canola | cytosol | 44.51 | 47.1 |
| GSMUA_Achr2P08730_001 | Banana | cytosol | 46.95 | 46.39 |
| GSMUA_Achr7P27420_001 | Banana | cytosol | 45.12 | 44.85 |
| KRH69989 | Soybean | cytosol | 43.9 | 43.64 |
| KRH08345 | Soybean | cytosol | 43.9 | 42.11 |
| TraesCS5A01G404200.1 | Wheat | cytosol | 32.32 | 30.11 |
| Zm00001d034190_P001 | Maize | cytosol | 32.93 | 29.67 |
| TraesCS5D01G414000.1 | Wheat | cytosol | 32.32 | 29.61 |
| TraesCS5D01G414200.1 | Wheat | cytosol | 31.71 | 29.55 |
| TraesCS5D01G414300.1 | Wheat | cytosol | 31.71 | 29.55 |
| TraesCS5A01G404100.1 | Wheat | cytosol | 31.1 | 28.98 |
| HORVU5Hr1G098280.1 | Barley | cytosol | 31.1 | 28.98 |
| CDY01339 | Canola | nucleus | 35.98 | 28.5 |
| TraesCS5D01G414100.1 | Wheat | cytosol | 31.1 | 28.49 |
| TraesCS5B01G408800.1 | Wheat | cytosol | 30.49 | 28.41 |
| HORVU5Hr1G098290.1 | Barley | cytosol | 30.49 | 28.41 |
| Os03t0768900-00 | Rice | cytosol | 30.49 | 28.41 |
| CDX85960 | Canola | cytosol | 35.98 | 28.37 |
| TraesCS5B01G408700.1 | Wheat | cytosol | 31.71 | 28.26 |
| Os03t0740200-00 | Rice | plastid | 29.27 | 28.24 |
| TraesCS5A01G379900.1 | Wheat | plastid | 28.66 | 28.14 |
| CDX96609 | Canola | cytosol | 35.98 | 28.1 |
| TraesCS5B01G409000.1 | Wheat | cytosol | 29.27 | 28.07 |
| TraesCS5A01G404000.1 | Wheat | cytosol | 30.49 | 27.93 |
| TraesCS5D01G389400.1 | Wheat | plastid | 28.66 | 27.81 |
| CDY20399 | Canola | nucleus, plastid | 35.98 | 27.7 |
| EER93387 | Sorghum | cytosol | 31.71 | 27.66 |
| TraesCS1B01G471500.1 | Wheat | mitochondrion | 31.1 | 27.57 |
| CDY00357 | Canola | nucleus | 34.76 | 27.54 |
| CDY33663 | Canola | cytosol | 34.76 | 27.54 |
| Zm00001d013311_P001 | Maize | plastid | 26.83 | 27.5 |
| TraesCS1D01G444700.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 31.1 | 27.42 |
| HORVU1Hr1G094330.1 | Barley | cytosol | 31.1 | 27.27 |
| CDX68092 | Canola | cytosol, plastid | 34.76 | 27.14 |
| TraesCS1A01G436400.1 | Wheat | plastid | 31.1 | 26.98 |
| CDY45978 | Canola | nucleus | 34.76 | 26.89 |
| TraesCS1D01G444800.1 | Wheat | cytosol, plastid | 30.49 | 26.88 |
| Zm00001d013178_P001 | Maize | cytosol | 30.49 | 26.88 |
| TraesCS1A01G436300.1 | Wheat | mitochondrion | 31.1 | 26.84 |
| TraesCS5B01G383500.1 | Wheat | plastid | 28.05 | 26.74 |
| Zm00001d033943_P001 | Maize | plastid | 26.83 | 26.51 |
| KXG37596 | Sorghum | cytosol, nucleus, plastid | 26.83 | 26.35 |
| TraesCS2D01G257700.1 | Wheat | mitochondrion, nucleus, plastid | 29.88 | 26.06 |
| TraesCS2B01G276100.1 | Wheat | cytosol, extracellular, plastid | 29.88 | 26.06 |
| TraesCS2D01G257800.1 | Wheat | plastid | 30.49 | 26.04 |
| TraesCS2B01G276000.1 | Wheat | cytosol, nucleus, plastid | 29.27 | 25.53 |
| TraesCS2A01G266000.1 | Wheat | plastid | 29.88 | 25.52 |
| CDY06423 | Canola | cytosol | 25.0 | 25.47 |
| TraesCS2A01G266100.1 | Wheat | cytosol | 25.61 | 25.45 |
| EER95817 | Sorghum | nucleus | 29.88 | 25.26 |
| CDY04592 | Canola | plastid | 36.59 | 24.9 |
| Os07t0123100-00 | Rice | extracellular | 31.1 | 24.88 |
| CDY29485 | Canola | plastid | 36.59 | 24.79 |
| HORVU5Hr1G098260.1 | Barley | cytosol, mitochondrion | 32.32 | 24.77 |
| HORVU5Hr1G093900.1 | Barley | plastid | 26.22 | 24.57 |
| Zm00001d018717_P001 | Maize | cytosol | 28.66 | 24.23 |
| HORVU2Hr1G061800.1 | Barley | plastid | 28.05 | 24.21 |
| TraesCS5A01G403900.1 | Wheat | plastid | 32.93 | 23.18 |
| Zm00001d007974_P001 | Maize | nucleus | 26.22 | 22.28 |
| HORVU2Hr1G061850.1 | Barley | extracellular, plastid | 19.51 | 16.16 |
Protein Annotations
| EnsemblPlants:CDX76853 | EnsemblPlantsGene:GSBRNA2T00127363001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF17 | PFAM:PF14009 |
| ProteinID:CDX76853 | ProteinID:CDX76853.1 | SEG:seg | UniParc:UPI0004EE6858 | MapMan:35.2 | : |
Description
BnaC08g34390D
Coordinates
chrLK031808:-:1493432..1493926
Molecular Weight (calculated)
17889.5 Da
IEP (calculated)
8.758
GRAVY (calculated)
-0.305
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICSSYEST QVATAKLILQ DGRMMEFTTP VKVGYALQKN PTCFICNSDD MDFDDVISAI STEEELQLGQ IYFALPLSSL HQSLKAEEMA SLAVKASSAR
101: MRSGHSCGRD KCRCRRKCVA PVIFSSQRVA ALGSDGQTRN GKRRGCSGGS GRRKYAAKLS MIEE
101: MRSGHSCGRD KCRCRRKCVA PVIFSSQRVA ALGSDGQTRN GKRRGCSGGS GRRKYAAKLS MIEE
001: MGICSSYEST QVATAKLILH DGRMMEFTSP VKVGYVLQKN PMCFICNSDD MDFDNVVSAI SADEEFQLGQ LYFALPLSSL HHSLKAEEMA ALAVKASSAL
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
101: MRSGGSCGRD KCRCRRKCVS PVIFSARRVA AVGANGETRN GKRRGGGGSG RRKYAAKLSK IEE
Arabidopsis Description
HTH-type transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q680G2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.