Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96609 | Canola | cytosol | 96.14 | 94.76 |
| Bra016439.1-P | Field mustard | cytosol | 95.65 | 94.29 |
| CDY00357 | Canola | nucleus | 80.19 | 80.19 |
| CDY01339 | Canola | nucleus | 79.23 | 79.23 |
| AT1G21010.1 | Thale cress | cytosol | 78.74 | 77.62 |
| CDY29485 | Canola | plastid | 82.61 | 70.66 |
| CDY04592 | Canola | plastid | 81.16 | 69.71 |
| CDY20399 | Canola | nucleus, plastid | 65.22 | 63.38 |
| CDY45978 | Canola | nucleus | 64.73 | 63.21 |
| CDX68092 | Canola | cytosol, plastid | 60.39 | 59.52 |
| CDX85960 | Canola | cytosol | 59.42 | 59.13 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 46.38 | 50.26 |
| Solyc04g082960.1.1 | Tomato | cytosol | 41.55 | 45.99 |
| CDY06423 | Canola | cytosol | 35.27 | 45.34 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 42.03 | 44.39 |
| TraesCS6D01G158200.1 | Wheat | plastid | 19.32 | 37.38 |
| CDY45243 | Canola | cytosol | 25.12 | 37.14 |
| CDX89594 | Canola | cytosol | 27.54 | 34.97 |
| CDY39665 | Canola | cytosol | 27.54 | 34.97 |
| CDX76853 | Canola | cytosol | 27.54 | 34.76 |
| CDY22462 | Canola | cytosol, nucleus, plastid | 28.99 | 34.68 |
| CDY42708 | Canola | nucleus | 28.5 | 34.5 |
| CDX72612 | Canola | nucleus | 28.02 | 33.92 |
| CDX77946 | Canola | cytosol | 24.15 | 33.78 |
| CDY46066 | Canola | cytosol | 26.57 | 33.74 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 29.47 | 33.15 |
| CDX75606 | Canola | nucleus | 28.02 | 33.14 |
| CDY24764 | Canola | cytosol, nucleus, plastid | 27.54 | 32.95 |
| CDX81387 | Canola | cytosol | 24.64 | 32.9 |
| CDX73789 | Canola | cytosol | 24.15 | 32.68 |
| CDY55087 | Canola | cytosol | 23.67 | 32.45 |
| CDY18612 | Canola | cytosol | 24.15 | 32.26 |
| CDX90684 | Canola | cytosol, nucleus, plastid | 24.15 | 32.05 |
| CDX69254 | Canola | cytosol | 27.54 | 32.02 |
| CDY28982 | Canola | nucleus | 23.67 | 31.41 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 28.02 | 31.18 |
| TraesCS6D01G158000.1 | Wheat | plastid | 28.5 | 30.89 |
| HORVU6Hr1G034380.1 | Barley | plastid | 28.5 | 30.89 |
| TraesCS6D01G158100.1 | Wheat | plastid | 27.54 | 30.81 |
| TraesCS6B01G196500.1 | Wheat | plastid | 28.02 | 30.53 |
| TraesCS6A01G168600.1 | Wheat | plastid | 28.99 | 30.3 |
| TraesCS6D01G157700.1 | Wheat | plastid | 28.5 | 30.1 |
| TraesCS6D01G157600.1 | Wheat | plastid | 27.54 | 30.0 |
| CDY28078 | Canola | cytosol | 23.19 | 30.0 |
| Os02t0193300-01 | Rice | mitochondrion | 27.54 | 29.69 |
| TraesCS6B01G196600.1 | Wheat | plastid | 28.02 | 29.59 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 24.15 | 28.57 |
| Os02t0193200-01 | Rice | mitochondrion | 27.54 | 28.5 |
| TraesCS7A01G394600.1 | Wheat | plastid | 25.6 | 27.04 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 25.12 | 26.53 |
| TraesCS7D01G390000.1 | Wheat | plastid | 24.64 | 26.02 |
| EES06442 | Sorghum | plastid | 25.6 | 25.98 |
| Os02t0193100-01 | Rice | cytosol, peroxisome, plastid | 26.09 | 25.84 |
| Zm00001d046687_P001 | Maize | plastid | 26.09 | 25.84 |
| TraesCS7B01G296600.1 | Wheat | plastid | 24.15 | 25.64 |
| TraesCS7B01G296700.1 | Wheat | plastid | 23.67 | 25.52 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 24.64 | 25.5 |
| Zm00001d036787_P001 | Maize | plastid | 26.57 | 25.35 |
| EER88673 | Sorghum | plastid | 28.02 | 25.22 |
| Zm00001d015867_P001 | Maize | plastid | 25.6 | 24.77 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 25.12 | 24.53 |
| OQU84553 | Sorghum | plastid | 23.67 | 24.14 |
| HORVU7Hr1G093080.1 | Barley | plastid | 24.15 | 23.7 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 21.74 | 21.43 |
| TraesCS7D01G390100.1 | Wheat | plastid | 24.15 | 20.92 |
Protein Annotations
| EnsemblPlants:CDY33663 | EnsemblPlantsGene:GSBRNA2T00055028001 | InterPro:DUF4228_plant | PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | PFAM:PF14009 |
| ProteinID:CDY33663 | ProteinID:CDY33663.1 | SEG:seg | UniParc:UPI0004EDE8D2 | UniProt:A0A078H9Y9 | MapMan:35.2 |
Description
BnaC08g19630DBnaC08g19630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Y9]
Coordinates
chrLK032319:+:322251..322874
Molecular Weight (calculated)
22514.9 Da
IEP (calculated)
11.010
GRAVY (calculated)
-0.353
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCVSLNRR DSNSPPTVKI VSVNGDLREY NVPVLASQVL EAESAASSSS SYFICDSDSL LYDDFIPAVK SAEPLHAEQI YFVLPISKRR NRLTAPDMAA
101: LAVKASVAIQ NSVGKDFRRR KKGRISPIMT LTTQPNGSVA AVNGKASEST DSKGRPLVKR TATYKASSGY NRSGSVRNLR RHTSRRAKLA VRSFRLKLST
201: IHEGSVV
101: LAVKASVAIQ NSVGKDFRRR KKGRISPIMT LTTQPNGSVA AVNGKASEST DSKGRPLVKR TATYKASSGY NRSGSVRNLR RHTSRRAKLA VRSFRLKLST
201: IHEGSVV
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Arabidopsis Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.