Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025866.1-P | Field mustard | cytosol | 85.24 | 84.43 |
| CDY00357 | Canola | nucleus | 81.9 | 83.09 |
| CDY01339 | Canola | nucleus | 80.48 | 81.64 |
| Bra012264.1-P | Field mustard | cytosol | 79.05 | 80.19 |
| CDY33663 | Canola | cytosol | 77.62 | 78.74 |
| CDX96609 | Canola | cytosol | 78.57 | 78.57 |
| Bra016439.1-P | Field mustard | cytosol | 78.1 | 78.1 |
| CDY29485 | Canola | plastid | 85.24 | 73.97 |
| CDY04592 | Canola | plastid | 84.29 | 73.44 |
| AT1G76600.1 | Thale cress | nucleus | 66.67 | 64.81 |
| VIT_18s0122g00300.t01 | Wine grape | plastid | 47.62 | 52.36 |
| PGSC0003DMT400025724 | Potato | cytosol, plastid | 43.81 | 46.94 |
| Solyc04g082960.1.1 | Tomato | cytosol | 41.43 | 46.52 |
| TraesCS6D01G158200.1 | Wheat | plastid | 19.52 | 38.32 |
| GSMUA_Achr9P12270_001 | Banana | cytosol | 32.86 | 37.5 |
| AT2G23690.1 | Thale cress | cytosol | 27.62 | 35.58 |
| AT4G37240.1 | Thale cress | cytosol, nucleus, plastid | 28.1 | 35.12 |
| AT3G50800.1 | Thale cress | cytosol, nucleus, plastid | 23.33 | 32.24 |
| AT5G66580.1 | Thale cress | cytosol | 23.33 | 31.41 |
| TraesCS6D01G157700.1 | Wheat | plastid | 29.05 | 31.12 |
| TraesCS6D01G158000.1 | Wheat | plastid | 28.1 | 30.89 |
| HORVU6Hr1G034380.1 | Barley | plastid | 28.1 | 30.89 |
| TraesCS6D01G158100.1 | Wheat | plastid | 27.14 | 30.81 |
| TraesCS6A01G168600.1 | Wheat | plastid | 29.05 | 30.81 |
| TraesCS6A01G168500.1 | Wheat | mitochondrion | 27.14 | 30.65 |
| TraesCS6B01G196500.1 | Wheat | plastid | 27.62 | 30.53 |
| TraesCS6B01G196600.1 | Wheat | plastid | 28.1 | 30.1 |
| TraesCS6D01G157600.1 | Wheat | plastid | 27.14 | 30.0 |
| Os02t0193300-01 | Rice | mitochondrion | 27.14 | 29.69 |
| Os02t0193200-01 | Rice | mitochondrion | 27.62 | 29.0 |
| TraesCS7A01G394600.1 | Wheat | plastid | 26.19 | 28.06 |
| HORVU6Hr1G034360.1 | Barley | mitochondrion, plastid | 23.33 | 28.0 |
| TraesCS7D01G390200.1 | Wheat | mitochondrion, plastid | 25.71 | 27.55 |
| TraesCS7D01G390000.1 | Wheat | plastid | 25.24 | 27.04 |
| EES06442 | Sorghum | plastid | 26.19 | 26.96 |
| TraesCS7B01G296600.1 | Wheat | plastid | 24.76 | 26.67 |
| TraesCS7A01G394700.1 | Wheat | mitochondrion, plastid | 25.24 | 26.5 |
| TraesCS7B01G296700.1 | Wheat | plastid | 23.81 | 26.04 |
| HORVU7Hr1G093050.1 | Barley | mitochondrion, plastid | 26.19 | 25.94 |
| EER88673 | Sorghum | plastid | 28.1 | 25.65 |
| Zm00001d046687_P001 | Maize | plastid | 25.24 | 25.36 |
| Os02t0193100-01 | Rice | cytosol, peroxisome, plastid | 25.24 | 25.36 |
| Zm00001d015867_P001 | Maize | plastid | 25.71 | 25.23 |
| HORVU7Hr1G093080.1 | Barley | plastid | 25.24 | 25.12 |
| Zm00001d036787_P001 | Maize | plastid | 25.71 | 24.88 |
| OQU84553 | Sorghum | plastid | 23.81 | 24.63 |
| HORVU6Hr1G034350.1 | Barley | cytosol | 22.38 | 22.38 |
| TraesCS7D01G390100.1 | Wheat | plastid | 24.29 | 21.34 |
Protein Annotations
| MapMan:35.2 | EntrezGene:838695 | ProteinID:AEE30054.1 | EMBL:AK227779 | ArrayExpress:AT1G21010 | EnsemblPlantsGene:AT1G21010 |
| RefSeq:AT1G21010 | TAIR:AT1G21010 | RefSeq:AT1G21010-TAIR-G | EnsemblPlants:AT1G21010.1 | TAIR:AT1G21010.1 | EMBL:BT009719 |
| InterPro:DUF4228_plant | RefSeq:NP_564129.1 | PFAM:PF14009 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR33052 | PANTHER:PTHR33052:SF15 | UniProt:Q7XJ58 | UniParc:UPI0000162E4E | SEG:seg | : |
Description
At1g21010 [Source:UniProtKB/TrEMBL;Acc:Q7XJ58]
Coordinates
chr1:+:7346156..7347283
Molecular Weight (calculated)
22976.4 Da
IEP (calculated)
10.594
GRAVY (calculated)
-0.320
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGICVSFRRE DSNSSPTVKI VTVNGDLREY NVPVIASQVL EAESAAAYSS SSSSRPSSYF ICDSDSLYYD DFIPAIKSEE PLQADQIYFV LPISKRQSRL
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
101: TASDMAALAV KASVAIQNSV KKESRRRKKV RISPVMMLTG SNDSVNGNGS ETTVKKGRPF VSKTAPVKAS SGINRSGSVR NLRRYTSKRA KLAVRSFRLK
201: LSTIYEGSVV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.